RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 CHKB-CPT1BH3BT56 60 aa3.14□□□□□ -1.91
CCDC171-204ENST00000470191 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
CCDC171-204ENST00000470191 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
CCDC171-204ENST00000470191 FAM240AA0A1B0GVK7 77 aa3.11□□□□□ -1.91
CCDC171-204ENST00000470191 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
CCDC171-204ENST00000470191 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
CCDC171-204ENST00000470191 LINC00643Q86TS7 51 aa3.1□□□□□ -1.91
CCDC171-204ENST00000470191 SPINT4Q6UDR6 99 aa3.08□□□□□ -1.92
CCDC171-204ENST00000470191 C10orf95Q9H7T3 257 aa3.08□□□□□ -1.92
CCDC171-204ENST00000470191 SCGB1A1P11684 91 aa3.06□□□□□ -1.92
CCDC171-204ENST00000470191 LOC105371267A0A1B0GV96 52 aa3.05□□□□□ -1.92
CCDC171-204ENST00000470191 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
CCDC171-204ENST00000470191 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
CCDC171-204ENST00000470191 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
CCDC171-204ENST00000470191 SPATA8Q6RVD6 105 aa3.02□□□□□ -1.93
CCDC171-204ENST00000470191 KRTAP12-1P59990 96 aa2.98□□□□□ -1.93
CCDC171-204ENST00000470191 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
CCDC171-204ENST00000470191 PCP4L1A6NKN8 68 aa2.95□□□□□ -1.94
CCDC171-204ENST00000470191 TNP1P09430 55 aa2.92□□□□□ -1.94
CCDC171-204ENST00000470191 SEC61GP60059 68 aa2.92□□□□□ -1.94
CCDC171-204ENST00000470191 SNURFQ9Y675 71 aa2.92□□□□□ -1.94
CCDC171-204ENST00000470191 SERP1Q9Y6X1 66 aa2.92□□□□□ -1.94
CCDC171-204ENST00000470191 A0A1B0GU33 70 aa2.9□□□□□ -1.95
CCDC171-204ENST00000470191 KRTAP12-3P60328 96 aa2.9□□□□□ -1.95
CCDC171-204ENST00000470191 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
CCDC171-204ENST00000470191 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
CCDC171-204ENST00000470191 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
CCDC171-204ENST00000470191 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
CCDC171-204ENST00000470191 COA5Q86WW8 74 aa2.85□□□□□ -1.95
CCDC171-204ENST00000470191 A8MU10 97 aa2.84□□□□□ -1.95
CCDC171-204ENST00000470191 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
CCDC171-204ENST00000470191 SPANXA2-OT1Q8N9U9 137 aa2.83□□□□□ -1.96
CCDC171-204ENST00000470191 SMIM20Q8N5G0 67 aa2.82□□□□□ -1.96
CCDC171-204ENST00000470191 SMIM26A0A096LP01 95 aa2.81□□□□□ -1.96
CCDC171-204ENST00000470191 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
CCDC171-204ENST00000470191 J3QR89 54 aa2.77□□□□□ -1.97
CCDC171-204ENST00000470191 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
CCDC171-204ENST00000470191 A0A1B0GV90 55 aa2.73□□□□□ -1.97
CCDC171-204ENST00000470191 SERP2Q8N6R1 65 aa2.72□□□□□ -1.97
CCDC171-204ENST00000470191 A0A1B0GU69 56 aa2.7□□□□□ -1.98
CCDC171-204ENST00000470191 MT1AP04731 61 aa2.7□□□□□ -1.98
CCDC171-204ENST00000470191 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
CCDC171-204ENST00000470191 KRTAP25-1Q3LHN0 102 aa2.64□□□□□ -1.99
CCDC171-204ENST00000470191 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
CCDC171-204ENST00000470191 H7BZZ5 65 aa2.51□□□□□ -2.01
CCDC171-204ENST00000470191 K7ERU9 68 aa2.51□□□□□ -2.01
CCDC171-204ENST00000470191 PRR15LQ9BU68 103 aa2.5□□□□□ -2.01
CCDC171-204ENST00000470191 COX7CP15954 63 aa2.47□□□□□ -2.01
CCDC171-204ENST00000470191 UQCR11O14957 56 aa2.41□□□□□ -2.02
CCDC171-204ENST00000470191 LINC01558Q9Y6Z2 57 aa2.38□□□□□ -2.03
CCDC171-204ENST00000470191 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
CCDC171-204ENST00000470191 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
CCDC171-204ENST00000470191 K7ERS5 55 aa2.35□□□□□ -2.03
CCDC171-204ENST00000470191 MIR22HGQ0VDD5 57 aa2.34□□□□□ -2.03
CCDC171-204ENST00000470191 RPS28P62857 69 aaKnown RBP2.29□□□□□ -2.04
CCDC171-204ENST00000470191 ATP5EP56381 51 aaPredicted RBP2.22□□□□□ -2.05
CCDC171-204ENST00000470191 ANAPC13Q9BS18 74 aa2.22□□□□□ -2.05
CCDC171-204ENST00000470191 CCDC179H3BU77 68 aa2.21□□□□□ -2.06
CCDC171-204ENST00000470191 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
CCDC171-204ENST00000470191 CDC42SE1Q9NRR8 79 aa2.18□□□□□ -2.06
CCDC171-204ENST00000470191 PSPHP1O15172 72 aa2.15□□□□□ -2.07
CCDC171-204ENST00000470191 Q1T7F1 81 aa2.14□□□□□ -2.07
CCDC171-204ENST00000470191 ROMO1P60602 79 aa2.13□□□□□ -2.07
CCDC171-204ENST00000470191 LUZP6Q538Z0 58 aa2.13□□□□□ -2.07
CCDC171-204ENST00000470191 V9GYY9 64 aa2.08□□□□□ -2.08
CCDC171-204ENST00000470191 A6NED7 52 aa2.04□□□□□ -2.08
CCDC171-204ENST00000470191 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
CCDC171-204ENST00000470191 TMEM258P61165 79 aa2.04□□□□□ -2.08
CCDC171-204ENST00000470191 PRO0628Q9UI54 55 aa2.04□□□□□ -2.08
CCDC171-204ENST00000470191 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
CCDC171-204ENST00000470191 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
CCDC171-204ENST00000470191 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
CCDC171-204ENST00000470191 KTN1-AS1Q86SY8 53 aa1.39□□□□□ -2.19
CCDC171-204ENST00000470191 PMAIP1Q13794 54 aa1.35□□□□□ -2.19
CCDC171-204ENST00000470191 BRK1Q8WUW1 75 aa1.35□□□□□ -2.19
CCDC171-204ENST00000470191 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
CCDC171-204ENST00000470191 PRM1P04553 51 aa1.1□□□□□ -2.23
CCDC171-204ENST00000470191 INE1O15225 51 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 68.9 ms