RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 PCLOQ9Y6V0 5065 aa2.34□□□□□ -2.03
UBE3C-204ENST00000469336 KRTAP12-3P60328 96 aa2.33□□□□□ -2.04
UBE3C-204ENST00000469336 UBR4Q5T4S7 5183 aa2.32□□□□□ -2.04
UBE3C-204ENST00000469336 Q5VSD8 79 aa2.3□□□□□ -2.04
UBE3C-204ENST00000469336 TNP1P09430 55 aa2.29□□□□□ -2.04
UBE3C-204ENST00000469336 MT1HL1P0DM35 61 aa2.28□□□□□ -2.04
UBE3C-204ENST00000469336 PRO2289Q9P1D8 64 aa2.28□□□□□ -2.04
UBE3C-204ENST00000469336 INE1O15225 51 aa2.27□□□□□ -2.05
UBE3C-204ENST00000469336 RYR2Q92736 4967 aa2.26□□□□□ -2.05
UBE3C-204ENST00000469336 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
UBE3C-204ENST00000469336 HERC2O95714 4834 aa2.25□□□□□ -2.05
UBE3C-204ENST00000469336 HERC1Q15751 4861 aa2.19□□□□□ -2.06
UBE3C-204ENST00000469336 LRP2P98164 4655 aa2.19□□□□□ -2.06
UBE3C-204ENST00000469336 FLGP20930 4061 aaPredicted RBP2.18□□□□□ -2.06
UBE3C-204ENST00000469336 KIAA1109Q2LD37 5005 aa2.16□□□□□ -2.06
UBE3C-204ENST00000469336 KRTAP19-2Q3LHN2 52 aa2.16□□□□□ -2.06
UBE3C-204ENST00000469336 MUC17Q685J3 4493 aa2.16□□□□□ -2.06
UBE3C-204ENST00000469336 LPAP08519 4548 aa2.12□□□□□ -2.07
UBE3C-204ENST00000469336 KRTAP8-1Q8IUC2 63 aa2.11□□□□□ -2.07
UBE3C-204ENST00000469336 SPRR2GQ9BYE4 73 aa2.11□□□□□ -2.07
UBE3C-204ENST00000469336 ABCA13Q86UQ4 5058 aa2.08□□□□□ -2.08
UBE3C-204ENST00000469336 KRTAP4-1Q9BYQ7 146 aa2.08□□□□□ -2.08
UBE3C-204ENST00000469336 CRCT1Q9UGL9 99 aa2.07□□□□□ -2.08
UBE3C-204ENST00000469336 MUC2Q02817 5179 aa2.01□□□□□ -2.09
UBE3C-204ENST00000469336 KRTAP19-8Q3LI54 63 aa2.01□□□□□ -2.09
UBE3C-204ENST00000469336 FSIP2Q5CZC0 6907 aa1.96□□□□□ -2.1
UBE3C-204ENST00000469336 RNF213Q63HN8 5207 aa1.96□□□□□ -2.1
UBE3C-204ENST00000469336 HMCN2Q8NDA2 5059 aa1.9□□□□□ -2.1
UBE3C-204ENST00000469336 MT2AP02795 61 aa1.9□□□□□ -2.11
UBE3C-204ENST00000469336 MT1XP80297 61 aa1.9□□□□□ -2.11
UBE3C-204ENST00000469336 FAT4Q6V0I7 4981 aa1.89□□□□□ -2.11
UBE3C-204ENST00000469336 M0R2T5 61 aa1.88□□□□□ -2.11
UBE3C-204ENST00000469336 MT1FP04733 61 aa1.88□□□□□ -2.11
UBE3C-204ENST00000469336 MT1BP07438 61 aa1.88□□□□□ -2.11
UBE3C-204ENST00000469336 MT1HP80294 61 aa1.87□□□□□ -2.11
UBE3C-204ENST00000469336 KRTAP2-3P0C7H8 128 aa1.86□□□□□ -2.11
UBE3C-204ENST00000469336 KRTAP2-4Q9BYR9 128 aa1.86□□□□□ -2.11
UBE3C-204ENST00000469336 KRTAP2-1Q9BYU5 128 aa1.86□□□□□ -2.11
UBE3C-204ENST00000469336 FCGBPQ9Y6R7 5405 aaPredicted RBP1.79□□□□□ -2.12
UBE3C-204ENST00000469336 KRTAP20-1Q3LI63 56 aa1.79□□□□□ -2.12
UBE3C-204ENST00000469336 KRTAP19-5Q3LI72 72 aa1.79□□□□□ -2.12
UBE3C-204ENST00000469336 SYNE2Q8WXH0 6885 aaKnown RBP1.72□□□□□ -2.13
UBE3C-204ENST00000469336 NEBP20929 6669 aa1.71□□□□□ -2.14
UBE3C-204ENST00000469336 MT1EP04732 61 aa1.7□□□□□ -2.14
UBE3C-204ENST00000469336 KRTAP19-7Q3SYF9 63 aa1.7□□□□□ -2.14
UBE3C-204ENST00000469336 SSPOA2VEC9 5147 aa1.68□□□□□ -2.14
UBE3C-204ENST00000469336 MT1LQ93083 61 aa1.68□□□□□ -2.14
UBE3C-204ENST00000469336 GPR98Q8WXG9 6306 aa1.66□□□□□ -2.14
UBE3C-204ENST00000469336 MACF1Q9UPN3 7388 aaKnown RBP1.65□□□□□ -2.15
UBE3C-204ENST00000469336 MT1AP04731 61 aa1.6□□□□□ -2.15
UBE3C-204ENST00000469336 MT1GP13640 62 aa1.58□□□□□ -2.16
UBE3C-204ENST00000469336 USH2AO75445 5202 aa1.55□□□□□ -2.16
UBE3C-204ENST00000469336 KRTAP19-3Q7Z4W3 81 aa1.54□□□□□ -2.16
UBE3C-204ENST00000469336 MT1MQ8N339 61 aa1.53□□□□□ -2.16
UBE3C-204ENST00000469336 KMT2DO14686 5537 aa1.53□□□□□ -2.16
UBE3C-204ENST00000469336 KRTAP19-6Q3LI70 58 aa1.52□□□□□ -2.17
UBE3C-204ENST00000469336 MUC12Q9UKN1 5478 aa1.49□□□□□ -2.17
UBE3C-204ENST00000469336 SPRR2FQ96RM1 72 aa1.44□□□□□ -2.18
UBE3C-204ENST00000469336 PRM1P04553 51 aa1.43□□□□□ -2.18
UBE3C-204ENST00000469336 SPRR2EP22531 72 aa1.42□□□□□ -2.18
UBE3C-204ENST00000469336 SPRR2BP35325 72 aa1.42□□□□□ -2.18
UBE3C-204ENST00000469336 SPRR2AP35326 72 aa1.42□□□□□ -2.18
UBE3C-204ENST00000469336 SPRR2DP22532 72 aa1.39□□□□□ -2.19
UBE3C-204ENST00000469336 MDN1Q9NU22 5596 aa1.39□□□□□ -2.19
UBE3C-204ENST00000469336 SYNE1Q8NF91 8797 aaKnown RBP1.38□□□□□ -2.19
UBE3C-204ENST00000469336 KRTAP6-1Q3LI64 71 aa1.38□□□□□ -2.19
UBE3C-204ENST00000469336 AHNAK2Q8IVF2 5795 aa1.38□□□□□ -2.19
UBE3C-204ENST00000469336 DSTQ03001 7570 aaKnown RBP1.37□□□□□ -2.19
UBE3C-204ENST00000469336 KRTAP6-2Q3LI66 62 aa1.35□□□□□ -2.19
UBE3C-204ENST00000469336 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
UBE3C-204ENST00000469336 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
UBE3C-204ENST00000469336 MT4P47944 62 aa1.22□□□□□ -2.21
UBE3C-204ENST00000469336 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
UBE3C-204ENST00000469336 MUC5BQ9HC84 5762 aaPredicted RBP1.13□□□□□ -2.23
UBE3C-204ENST00000469336 MUC5ACP98088 5654 aa1.12□□□□□ -2.23
UBE3C-204ENST00000469336 KRTAP20-2Q3LI61 65 aa1.03□□□□□ -2.24
UBE3C-204ENST00000469336 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
UBE3C-204ENST00000469336 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 9.2 ms