RNA–Protein interactions for RNA: ENST00000468878.1

TRIM46-207, Transcript of tripartite motif containing 46, humanhuman

TSL 2

Gene TRIM46, Length 3,318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-207ENST00000468878 KRTAP4-3Q9BYR4 195 aa6.05□□□□□ -1.44
TRIM46-207ENST00000468878 MT1EP04732 61 aa5.98□□□□□ -1.45
TRIM46-207ENST00000468878 MT1LQ93083 61 aa5.98□□□□□ -1.45
TRIM46-207ENST00000468878 LOC100996750A0A140TA64 210 aa5.98□□□□□ -1.45
TRIM46-207ENST00000468878 MT1GP13640 62 aa5.92□□□□□ -1.46
TRIM46-207ENST00000468878 MACF1Q9UPN3 7388 aaKnown RBP5.9□□□□□ -1.46
TRIM46-207ENST00000468878 SYNE2Q8WXH0 6885 aaKnown RBP5.9□□□□□ -1.47
TRIM46-207ENST00000468878 SPRR2FQ96RM1 72 aa5.89□□□□□ -1.47
TRIM46-207ENST00000468878 KRTAP19-6Q3LI70 58 aa5.83□□□□□ -1.48
TRIM46-207ENST00000468878 LCE2DQ5TA82 110 aaPredicted RBP5.74□□□□□ -1.49
TRIM46-207ENST00000468878 MDN1Q9NU22 5596 aa5.69□□□□□ -1.5
TRIM46-207ENST00000468878 KRTAP2-3P0C7H8 128 aa5.68□□□□□ -1.5
TRIM46-207ENST00000468878 KRTAP2-4Q9BYR9 128 aa5.68□□□□□ -1.5
TRIM46-207ENST00000468878 KRTAP2-1Q9BYU5 128 aa5.68□□□□□ -1.5
TRIM46-207ENST00000468878 KRTAP19-3Q7Z4W3 81 aa5.65□□□□□ -1.5
TRIM46-207ENST00000468878 MT1MQ8N339 61 aa5.64□□□□□ -1.51
TRIM46-207ENST00000468878 LCE3BQ5TA77 95 aa5.56□□□□□ -1.52
TRIM46-207ENST00000468878 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
TRIM46-207ENST00000468878 KRTAP9-2Q9BYQ4 174 aa5.41□□□□□ -1.54
TRIM46-207ENST00000468878 KRTAP12-4P60329 112 aa5.4□□□□□ -1.55
TRIM46-207ENST00000468878 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
TRIM46-207ENST00000468878 LCE5AQ5TCM9 118 aa5.34□□□□□ -1.55
TRIM46-207ENST00000468878 SPRR2EP22531 72 aa5.31□□□□□ -1.56
TRIM46-207ENST00000468878 SPRR2BP35325 72 aa5.31□□□□□ -1.56
TRIM46-207ENST00000468878 SPRR2AP35326 72 aa5.31□□□□□ -1.56
TRIM46-207ENST00000468878 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
TRIM46-207ENST00000468878 LCE1AQ5T7P2 110 aa5.15□□□□□ -1.59
TRIM46-207ENST00000468878 SPRR2DP22532 72 aa5.05□□□□□ -1.6
TRIM46-207ENST00000468878 LCE3DQ9BYE3 92 aa4.99□□□□□ -1.61
TRIM46-207ENST00000468878 MT1AP04731 61 aa4.95□□□□□ -1.62
TRIM46-207ENST00000468878 LCE3EQ5T5B0 92 aa4.86□□□□□ -1.63
TRIM46-207ENST00000468878 PRM1P04553 51 aa4.85□□□□□ -1.63
TRIM46-207ENST00000468878 KRTAP5-9P26371 169 aa4.84□□□□□ -1.63
TRIM46-207ENST00000468878 KRTAP9-7A8MTY7 169 aa4.84□□□□□ -1.63
TRIM46-207ENST00000468878 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
TRIM46-207ENST00000468878 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
TRIM46-207ENST00000468878 MT4P47944 62 aa4.71□□□□□ -1.66
TRIM46-207ENST00000468878 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
TRIM46-207ENST00000468878 KRTAP5-5Q701N2 237 aaPredicted RBP4.66□□□□□ -1.66
TRIM46-207ENST00000468878 KRTAP9-6A0A140TA67 174 aa4.65□□□□□ -1.67
TRIM46-207ENST00000468878 KRTAP6-3Q3LI67 103 aa4.59□□□□□ -1.67
TRIM46-207ENST00000468878 MT3P25713 68 aa4.58□□□□□ -1.68
TRIM46-207ENST00000468878 KRTAP4-6Q9BYQ5 205 aa4.5□□□□□ -1.69
TRIM46-207ENST00000468878 NEBP20929 6669 aa4.48□□□□□ -1.69
TRIM46-207ENST00000468878 HMCN1Q96RW7 5635 aa4.28□□□□□ -1.72
TRIM46-207ENST00000468878 LCE1DQ5T752 114 aa4.26□□□□□ -1.73
TRIM46-207ENST00000468878 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
TRIM46-207ENST00000468878 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
TRIM46-207ENST00000468878 KRTAP20-2Q3LI61 65 aa4.14□□□□□ -1.75
TRIM46-207ENST00000468878 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.76
TRIM46-207ENST00000468878 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
TRIM46-207ENST00000468878 LCE4AQ5TA78 99 aa4□□□□□ -1.77
TRIM46-207ENST00000468878 MUC5ACP98088 5654 aa4□□□□□ -1.77
TRIM46-207ENST00000468878 MUC19Q7Z5P9 8384 aa3.94□□□□□ -1.78
TRIM46-207ENST00000468878 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.78
TRIM46-207ENST00000468878 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
TRIM46-207ENST00000468878 KRTAP5-3Q6L8H2 238 aa3.74□□□□□ -1.81
TRIM46-207ENST00000468878 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
TRIM46-207ENST00000468878 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
TRIM46-207ENST00000468878 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
TRIM46-207ENST00000468878 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
TRIM46-207ENST00000468878 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
TRIM46-207ENST00000468878 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
TRIM46-207ENST00000468878 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
TRIM46-207ENST00000468878 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
TRIM46-207ENST00000468878 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
TRIM46-207ENST00000468878 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
TRIM46-207ENST00000468878 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
TRIM46-207ENST00000468878 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
TRIM46-207ENST00000468878 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
TRIM46-207ENST00000468878 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
TRIM46-207ENST00000468878 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
TRIM46-207ENST00000468878 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
TRIM46-207ENST00000468878 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
TRIM46-207ENST00000468878 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
TRIM46-207ENST00000468878 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
TRIM46-207ENST00000468878 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
TRIM46-207ENST00000468878 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 37.9 ms