RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 MUC17Q685J3 4493 aa1.41□□□□□ -2.18
HMGB1P25-201ENST00000468402 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
HMGB1P25-201ENST00000468402 LRP2P98164 4655 aa1.4□□□□□ -2.18
HMGB1P25-201ENST00000468402 KRTAP12-4P60329 112 aa1.4□□□□□ -2.19
HMGB1P25-201ENST00000468402 RNF213Q63HN8 5207 aa1.39□□□□□ -2.19
HMGB1P25-201ENST00000468402 KRTAP4-1Q9BYQ7 146 aa1.39□□□□□ -2.19
HMGB1P25-201ENST00000468402 TP53AIP1Q9HCN2 124 aa1.38□□□□□ -2.19
HMGB1P25-201ENST00000468402 KRTAP5-7Q6L8G8 165 aa1.36□□□□□ -2.19
HMGB1P25-201ENST00000468402 FAT4Q6V0I7 4981 aa1.36□□□□□ -2.19
HMGB1P25-201ENST00000468402 RPS29P62273 56 aaKnown RBP1.35□□□□□ -2.19
HMGB1P25-201ENST00000468402 MUC2Q02817 5179 aa1.33□□□□□ -2.2
HMGB1P25-201ENST00000468402 S4R3F8 94 aa1.33□□□□□ -2.2
HMGB1P25-201ENST00000468402 FLGP20930 4061 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P25-201ENST00000468402 COX6B2Q6YFQ2 88 aa1.32□□□□□ -2.2
HMGB1P25-201ENST00000468402 A0A0D9SG42 100 aa1.31□□□□□ -2.2
HMGB1P25-201ENST00000468402 H1FX-AS1Q4G0G2 97 aa1.28□□□□□ -2.2
HMGB1P25-201ENST00000468402 M0R2T5 61 aa1.27□□□□□ -2.21
HMGB1P25-201ENST00000468402 C10orf95Q9H7T3 257 aa1.27□□□□□ -2.21
HMGB1P25-201ENST00000468402 H0YAA0 97 aa1.26□□□□□ -2.21
HMGB1P25-201ENST00000468402 KRTAP19-2Q3LHN2 52 aa1.26□□□□□ -2.21
HMGB1P25-201ENST00000468402 M0QZ58 72 aa1.24□□□□□ -2.21
HMGB1P25-201ENST00000468402 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
HMGB1P25-201ENST00000468402 FSIP2Q5CZC0 6907 aa1.22□□□□□ -2.21
HMGB1P25-201ENST00000468402 MT1HP80294 61 aa1.22□□□□□ -2.21
HMGB1P25-201ENST00000468402 MT1FP04733 61 aa1.2□□□□□ -2.22
HMGB1P25-201ENST00000468402 MT2AP02795 61 aa1.19□□□□□ -2.22
HMGB1P25-201ENST00000468402 SSPOA2VEC9 5147 aa1.18□□□□□ -2.22
HMGB1P25-201ENST00000468402 USH2AO75445 5202 aa1.16□□□□□ -2.22
HMGB1P25-201ENST00000468402 CRCT1Q9UGL9 99 aa1.15□□□□□ -2.23
HMGB1P25-201ENST00000468402 MT1BP07438 61 aa1.12□□□□□ -2.23
HMGB1P25-201ENST00000468402 SYNE2Q8WXH0 6885 aaKnown RBP1.11□□□□□ -2.23
HMGB1P25-201ENST00000468402 NEBP20929 6669 aa1.1□□□□□ -2.23
HMGB1P25-201ENST00000468402 KMT2DO14686 5537 aa1.1□□□□□ -2.23
HMGB1P25-201ENST00000468402 FCGBPQ9Y6R7 5405 aaPredicted RBP1.1□□□□□ -2.23
HMGB1P25-201ENST00000468402 MACF1Q9UPN3 7388 aaKnown RBP1.09□□□□□ -2.23
HMGB1P25-201ENST00000468402 MT1XP80297 61 aa1.09□□□□□ -2.23
HMGB1P25-201ENST00000468402 SPRR2GQ9BYE4 73 aa1.09□□□□□ -2.23
HMGB1P25-201ENST00000468402 MUC12Q9UKN1 5478 aa1.09□□□□□ -2.23
HMGB1P25-201ENST00000468402 GPR98Q8WXG9 6306 aa1.06□□□□□ -2.24
HMGB1P25-201ENST00000468402 KRTAP19-8Q3LI54 63 aa1.06□□□□□ -2.24
HMGB1P25-201ENST00000468402 TNP1P09430 55 aa1.05□□□□□ -2.24
HMGB1P25-201ENST00000468402 KRTAP19-5Q3LI72 72 aa1.02□□□□□ -2.25
HMGB1P25-201ENST00000468402 HMCN1Q96RW7 5635 aa1.01□□□□□ -2.25
HMGB1P25-201ENST00000468402 MDN1Q9NU22 5596 aa1.01□□□□□ -2.25
HMGB1P25-201ENST00000468402 KRTAP19-6Q3LI70 58 aa0.97□□□□□ -2.25
HMGB1P25-201ENST00000468402 KRTAP8-1Q8IUC2 63 aa0.97□□□□□ -2.25
HMGB1P25-201ENST00000468402 SPRR2FQ96RM1 72 aa0.96□□□□□ -2.26
HMGB1P25-201ENST00000468402 KRTAP19-7Q3SYF9 63 aa0.95□□□□□ -2.26
HMGB1P25-201ENST00000468402 AHNAK2Q8IVF2 5795 aa0.94□□□□□ -2.26
HMGB1P25-201ENST00000468402 MT1EP04732 61 aa0.94□□□□□ -2.26
HMGB1P25-201ENST00000468402 MT1LQ93083 61 aa0.93□□□□□ -2.26
HMGB1P25-201ENST00000468402 MT1GP13640 62 aa0.92□□□□□ -2.26
HMGB1P25-201ENST00000468402 DSTQ03001 7570 aaKnown RBP0.9□□□□□ -2.26
HMGB1P25-201ENST00000468402 SPRR2EP22531 72 aa0.9□□□□□ -2.27
HMGB1P25-201ENST00000468402 SPRR2BP35325 72 aa0.9□□□□□ -2.27
HMGB1P25-201ENST00000468402 SPRR2AP35326 72 aa0.9□□□□□ -2.27
HMGB1P25-201ENST00000468402 KRTAP20-1Q3LI63 56 aa0.9□□□□□ -2.27
HMGB1P25-201ENST00000468402 MT1MQ8N339 61 aa0.89□□□□□ -2.27
HMGB1P25-201ENST00000468402 KRTAP19-3Q7Z4W3 81 aa0.88□□□□□ -2.27
HMGB1P25-201ENST00000468402 SPRR2DP22532 72 aa0.87□□□□□ -2.27
HMGB1P25-201ENST00000468402 AHNAKQ09666 5890 aaKnown RBP0.84□□□□□ -2.27
HMGB1P25-201ENST00000468402 KRTAP2-3P0C7H8 128 aa0.84□□□□□ -2.27
HMGB1P25-201ENST00000468402 KRTAP2-4Q9BYR9 128 aa0.84□□□□□ -2.27
HMGB1P25-201ENST00000468402 KRTAP6-1Q3LI64 71 aa0.82□□□□□ -2.28
HMGB1P25-201ENST00000468402 SYNE1Q8NF91 8797 aaKnown RBP0.82□□□□□ -2.28
HMGB1P25-201ENST00000468402 MUC5BQ9HC84 5762 aaPredicted RBP0.81□□□□□ -2.28
HMGB1P25-201ENST00000468402 MT4P47944 62 aa0.81□□□□□ -2.28
HMGB1P25-201ENST00000468402 KRTAP2-1Q9BYU5 128 aa0.81□□□□□ -2.28
HMGB1P25-201ENST00000468402 MUC5ACP98088 5654 aa0.77□□□□□ -2.29
HMGB1P25-201ENST00000468402 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
HMGB1P25-201ENST00000468402 MT1AP04731 61 aa0.76□□□□□ -2.29
HMGB1P25-201ENST00000468402 KRTAP6-2Q3LI66 62 aa0.75□□□□□ -2.29
HMGB1P25-201ENST00000468402 PRM1P04553 51 aa0.7□□□□□ -2.3
HMGB1P25-201ENST00000468402 KRTAP20-2Q3LI61 65 aa0.7□□□□□ -2.3
HMGB1P25-201ENST00000468402 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
HMGB1P25-201ENST00000468402 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
HMGB1P25-201ENST00000468402 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 82.5 ms