RNA–Protein interactions for RNA: ENST00000467853.5

PSMD6-204, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best)

Gene PSMD6, Length 4,583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-204ENST00000467853 PCLOQ9Y6V0 5065 aa2.41□□□□□ -2.02
PSMD6-204ENST00000467853 MUC2Q02817 5179 aa2.39□□□□□ -2.03
PSMD6-204ENST00000467853 KRTAP10-7P60409 375 aaPredicted RBP2.39□□□□□ -2.03
PSMD6-204ENST00000467853 LCE3CQ5T5A8 94 aa2.37□□□□□ -2.03
PSMD6-204ENST00000467853 RNF213Q63HN8 5207 aa2.34□□□□□ -2.04
PSMD6-204ENST00000467853 KRTAP19-5Q3LI72 72 aa2.34□□□□□ -2.04
PSMD6-204ENST00000467853 FAT4Q6V0I7 4981 aa2.31□□□□□ -2.04
PSMD6-204ENST00000467853 UBR4Q5T4S7 5183 aa2.29□□□□□ -2.04
PSMD6-204ENST00000467853 KRTAP2-3P0C7H8 128 aa2.23□□□□□ -2.05
PSMD6-204ENST00000467853 KRTAP2-4Q9BYR9 128 aa2.23□□□□□ -2.05
PSMD6-204ENST00000467853 KRTAP2-1Q9BYU5 128 aa2.23□□□□□ -2.05
PSMD6-204ENST00000467853 KRTAP2-2Q9BYT5 123 aa2.21□□□□□ -2.06
PSMD6-204ENST00000467853 KRTAP19-7Q3SYF9 63 aa2.18□□□□□ -2.06
PSMD6-204ENST00000467853 KRTAP9-6A8MVA2 160 aa2.18□□□□□ -2.06
PSMD6-204ENST00000467853 MT1LQ93083 61 aa2.16□□□□□ -2.06
PSMD6-204ENST00000467853 MT1EP04732 61 aa2.15□□□□□ -2.07
PSMD6-204ENST00000467853 KRTAP5-3Q6L8H2 238 aa2.13□□□□□ -2.07
PSMD6-204ENST00000467853 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
PSMD6-204ENST00000467853 LCE1AQ5T7P2 110 aa2.11□□□□□ -2.07
PSMD6-204ENST00000467853 KRTAP19-6Q3LI70 58 aa2.05□□□□□ -2.08
PSMD6-204ENST00000467853 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
PSMD6-204ENST00000467853 MT1GP13640 62 aa2.04□□□□□ -2.08
PSMD6-204ENST00000467853 LCE1FQ5T754 118 aa2.03□□□□□ -2.08
PSMD6-204ENST00000467853 USH2AO75445 5202 aa2.02□□□□□ -2.09
PSMD6-204ENST00000467853 KRTAP19-3Q7Z4W3 81 aa2.01□□□□□ -2.09
PSMD6-204ENST00000467853 MT1MQ8N339 61 aa2.01□□□□□ -2.09
PSMD6-204ENST00000467853 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
PSMD6-204ENST00000467853 KMT2DO14686 5537 aa1.99□□□□□ -2.09
PSMD6-204ENST00000467853 CRCT1Q9UGL9 99 aa1.95□□□□□ -2.1
PSMD6-204ENST00000467853 KRTAP4-3Q9BYR4 195 aa1.95□□□□□ -2.1
PSMD6-204ENST00000467853 SSPOA2VEC9 5147 aa1.95□□□□□ -2.1
PSMD6-204ENST00000467853 MT1AP04731 61 aa1.93□□□□□ -2.1
PSMD6-204ENST00000467853 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.11
PSMD6-204ENST00000467853 SPRR2FQ96RM1 72 aa1.88□□□□□ -2.11
PSMD6-204ENST00000467853 KRTAP6-1Q3LI64 71 aa1.81□□□□□ -2.12
PSMD6-204ENST00000467853 LCE1EQ5T753 118 aa1.8□□□□□ -2.12
PSMD6-204ENST00000467853 FCGBPQ9Y6R7 5405 aaPredicted RBP1.76□□□□□ -2.13
PSMD6-204ENST00000467853 PRM1P04553 51 aa1.76□□□□□ -2.13
PSMD6-204ENST00000467853 MUC12Q9UKN1 5478 aa1.75□□□□□ -2.13
PSMD6-204ENST00000467853 KRTAP5-5Q701N2 237 aaPredicted RBP1.73□□□□□ -2.13
PSMD6-204ENST00000467853 SPRR2EP22531 72 aa1.71□□□□□ -2.14
PSMD6-204ENST00000467853 KRTAP5-9P26371 169 aa1.71□□□□□ -2.14
PSMD6-204ENST00000467853 SPRR2BP35325 72 aa1.71□□□□□ -2.14
PSMD6-204ENST00000467853 SPRR2AP35326 72 aa1.71□□□□□ -2.14
PSMD6-204ENST00000467853 SYNE1Q8NF91 8797 aaKnown RBP1.7□□□□□ -2.14
PSMD6-204ENST00000467853 KRTAP6-2Q3LI66 62 aa1.68□□□□□ -2.14
PSMD6-204ENST00000467853 FSIP2Q5CZC0 6907 aa1.67□□□□□ -2.14
PSMD6-204ENST00000467853 KRTAP5-11Q6L8G4 156 aa1.65□□□□□ -2.14
PSMD6-204ENST00000467853 SPRR2DP22532 72 aa1.64□□□□□ -2.15
PSMD6-204ENST00000467853 DSTQ03001 7570 aaKnown RBP1.63□□□□□ -2.15
PSMD6-204ENST00000467853 KRTAP6-3Q3LI67 103 aa1.62□□□□□ -2.15
PSMD6-204ENST00000467853 MACF1Q9UPN3 7388 aaKnown RBP1.62□□□□□ -2.15
PSMD6-204ENST00000467853 SYNE2Q8WXH0 6885 aaKnown RBP1.55□□□□□ -2.16
PSMD6-204ENST00000467853 MDN1Q9NU22 5596 aa1.52□□□□□ -2.17
PSMD6-204ENST00000467853 KRTAP5-1Q6L8H4 278 aa1.5□□□□□ -2.17
PSMD6-204ENST00000467853 KRTAP5-4Q6L8H1 288 aa1.5□□□□□ -2.17
PSMD6-204ENST00000467853 KRTAP5-2Q701N4 177 aa1.42□□□□□ -2.18
PSMD6-204ENST00000467853 KRTAP20-2Q3LI61 65 aa1.41□□□□□ -2.18
PSMD6-204ENST00000467853 KRTAP20-1Q3LI63 56 aa1.4□□□□□ -2.19
PSMD6-204ENST00000467853 MT4P47944 62 aa1.39□□□□□ -2.19
PSMD6-204ENST00000467853 NEBP20929 6669 aa1.34□□□□□ -2.19
PSMD6-204ENST00000467853 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
PSMD6-204ENST00000467853 MUC5ACP98088 5654 aa1.3□□□□□ -2.2
PSMD6-204ENST00000467853 LCE1BQ5T7P3 118 aa1.3□□□□□ -2.2
PSMD6-204ENST00000467853 GPR98Q8WXG9 6306 aa1.3□□□□□ -2.2
PSMD6-204ENST00000467853 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
PSMD6-204ENST00000467853 KRTAP4-4Q9BYR3 166 aa1.29□□□□□ -2.2
PSMD6-204ENST00000467853 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.27□□□□□ -2.21
PSMD6-204ENST00000467853 LCE1CQ5T751 118 aa1.26□□□□□ -2.21
PSMD6-204ENST00000467853 HMCN1Q96RW7 5635 aa1.23□□□□□ -2.21
PSMD6-204ENST00000467853 KRTAP21-2Q3LI59 83 aa1.16□□□□□ -2.22
PSMD6-204ENST00000467853 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
PSMD6-204ENST00000467853 KRTAP5-8O75690 187 aa1.13□□□□□ -2.23
PSMD6-204ENST00000467853 KRTAP5-7Q6L8G8 165 aa1.11□□□□□ -2.23
PSMD6-204ENST00000467853 AHNAKQ09666 5890 aaKnown RBP0.98□□□□□ -2.25
PSMD6-204ENST00000467853 AHNAK2Q8IVF2 5795 aa0.98□□□□□ -2.25
PSMD6-204ENST00000467853 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
PSMD6-204ENST00000467853 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 131.5 ms