RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 S100A1P23297 94 aa3.33□□□□□ -1.88
VPS26A-204ENST00000467852 S100A6P06703 90 aa3.32□□□□□ -1.88
VPS26A-204ENST00000467852 H3BT86 120 aa3.31□□□□□ -1.88
VPS26A-204ENST00000467852 DMAC1Q96GE9 116 aa3.29□□□□□ -1.88
VPS26A-204ENST00000467852 LINC00208Q96KT6 92 aa3.29□□□□□ -1.88
VPS26A-204ENST00000467852 SPTSSBQ8NFR3 76 aa3.26□□□□□ -1.89
VPS26A-204ENST00000467852 SPINT4Q6UDR6 99 aa3.25□□□□□ -1.89
VPS26A-204ENST00000467852 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
VPS26A-204ENST00000467852 TNP1P09430 55 aa3.23□□□□□ -1.89
VPS26A-204ENST00000467852 TRAV7A0A075B6U4 112 aa3.22□□□□□ -1.89
VPS26A-204ENST00000467852 TAX1BP3O14907 124 aa3.21□□□□□ -1.9
VPS26A-204ENST00000467852 SEC61GP60059 68 aa3.21□□□□□ -1.9
VPS26A-204ENST00000467852 UQCR10Q9UDW1 63 aa3.18□□□□□ -1.9
VPS26A-204ENST00000467852 MP68P56378 58 aa3.14□□□□□ -1.91
VPS26A-204ENST00000467852 PCP4L1A6NKN8 68 aa3.12□□□□□ -1.91
VPS26A-204ENST00000467852 ACYP2P14621 99 aa3.09□□□□□ -1.91
VPS26A-204ENST00000467852 KRTAP12-1P59990 96 aa3.07□□□□□ -1.92
VPS26A-204ENST00000467852 M0R143 59 aa3.06□□□□□ -1.92
VPS26A-204ENST00000467852 PHGR1C9JFL3 82 aa3.04□□□□□ -1.92
VPS26A-204ENST00000467852 CHKB-CPT1BH3BT56 60 aa3.04□□□□□ -1.92
VPS26A-204ENST00000467852 KRTAP25-1Q3LHN0 102 aa3.04□□□□□ -1.92
VPS26A-204ENST00000467852 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
VPS26A-204ENST00000467852 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
VPS26A-204ENST00000467852 HIST1H4AP62805 103 aaKnown RBP3□□□□□ -1.93
VPS26A-204ENST00000467852 SPATA8Q6RVD6 105 aa3□□□□□ -1.93
VPS26A-204ENST00000467852 H3BPC8 53 aa2.96□□□□□ -1.94
VPS26A-204ENST00000467852 SCGB1A1P11684 91 aa2.96□□□□□ -1.94
VPS26A-204ENST00000467852 PYY3Q5JQD4 70 aa2.96□□□□□ -1.94
VPS26A-204ENST00000467852 ATP5EP2Q5VTU8 51 aa2.85□□□□□ -1.95
VPS26A-204ENST00000467852 SERP1Q9Y6X1 66 aa2.83□□□□□ -1.96
VPS26A-204ENST00000467852 A0A1B0GU33 70 aa2.81□□□□□ -1.96
VPS26A-204ENST00000467852 SMIM26A0A096LP01 95 aa2.78□□□□□ -1.96
VPS26A-204ENST00000467852 SPANXA2-OT1Q8N9U9 137 aa2.64□□□□□ -1.99
VPS26A-204ENST00000467852 ETDBQ3ZM63 59 aa2.63□□□□□ -1.99
VPS26A-204ENST00000467852 LUZP6Q538Z0 58 aa2.58□□□□□ -2
VPS26A-204ENST00000467852 FAM240AA0A1B0GVK7 77 aa2.55□□□□□ -2
VPS26A-204ENST00000467852 LINC00643Q86TS7 51 aa2.54□□□□□ -2
VPS26A-204ENST00000467852 SERP2Q8N6R1 65 aa2.54□□□□□ -2
VPS26A-204ENST00000467852 F8W1H4 67 aa2.53□□□□□ -2
VPS26A-204ENST00000467852 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
VPS26A-204ENST00000467852 H7BZZ5 65 aa2.46□□□□□ -2.02
VPS26A-204ENST00000467852 PSPHP1O15172 72 aa2.46□□□□□ -2.02
VPS26A-204ENST00000467852 COA5Q86WW8 74 aa2.44□□□□□ -2.02
VPS26A-204ENST00000467852 GTF2H5Q6ZYL4 71 aa2.43□□□□□ -2.02
VPS26A-204ENST00000467852 A0A1B0GU69 56 aa2.37□□□□□ -2.03
VPS26A-204ENST00000467852 SNURFQ9Y675 71 aa2.34□□□□□ -2.03
VPS26A-204ENST00000467852 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
VPS26A-204ENST00000467852 COL5A1-AS1Q5SY13 56 aa2.31□□□□□ -2.04
VPS26A-204ENST00000467852 PRR15LQ9BU68 103 aa2.3□□□□□ -2.04
VPS26A-204ENST00000467852 PRO0628Q9UI54 55 aa2.27□□□□□ -2.05
VPS26A-204ENST00000467852 SMIM6P0DI80 62 aa2.25□□□□□ -2.05
VPS26A-204ENST00000467852 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
VPS26A-204ENST00000467852 SMIM20Q8N5G0 67 aa2.25□□□□□ -2.05
VPS26A-204ENST00000467852 V9GYY9 64 aa2.2□□□□□ -2.06
VPS26A-204ENST00000467852 K7ERS5 55 aa2.17□□□□□ -2.06
VPS26A-204ENST00000467852 A6NED7 52 aa2.16□□□□□ -2.06
VPS26A-204ENST00000467852 RPS28P62857 69 aaKnown RBP2.16□□□□□ -2.06
VPS26A-204ENST00000467852 ANAPC13Q9BS18 74 aa2.15□□□□□ -2.07
VPS26A-204ENST00000467852 UQCR11O14957 56 aa1.94□□□□□ -2.1
VPS26A-204ENST00000467852 J3QR89 54 aa1.85□□□□□ -2.11
VPS26A-204ENST00000467852 MIR22HGQ0VDD5 57 aa1.8□□□□□ -2.12
VPS26A-204ENST00000467852 LINC01558Q9Y6Z2 57 aa1.76□□□□□ -2.13
VPS26A-204ENST00000467852 CDC42SE1Q9NRR8 79 aa1.74□□□□□ -2.13
VPS26A-204ENST00000467852 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
VPS26A-204ENST00000467852 ROMO1P60602 79 aa1.63□□□□□ -2.15
VPS26A-204ENST00000467852 Q1T7F1 81 aa1.6□□□□□ -2.15
VPS26A-204ENST00000467852 LOC105371267A0A1B0GV96 52 aa1.58□□□□□ -2.16
VPS26A-204ENST00000467852 COX7CP15954 63 aa1.53□□□□□ -2.16
VPS26A-204ENST00000467852 A0A1B0GV90 55 aa1.48□□□□□ -2.17
VPS26A-204ENST00000467852 TMEM258P61165 79 aa1.48□□□□□ -2.17
VPS26A-204ENST00000467852 KTN1-AS1Q86SY8 53 aa1.42□□□□□ -2.18
VPS26A-204ENST00000467852 K7ERU9 68 aa1.31□□□□□ -2.2
VPS26A-204ENST00000467852 ATP5EP56381 51 aaPredicted RBP1.29□□□□□ -2.2
VPS26A-204ENST00000467852 PMAIP1Q13794 54 aa1.09□□□□□ -2.23
VPS26A-204ENST00000467852 CCDC179H3BU77 68 aa0.97□□□□□ -2.25
VPS26A-204ENST00000467852 BRK1Q8WUW1 75 aa0.81□□□□□ -2.28
VPS26A-204ENST00000467852 INE1O15225 51 aa0.78□□□□□ -2.28
VPS26A-204ENST00000467852 PRM1P04553 51 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 306.7 ms