RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SPRR2DP22532 72 aa4.61□□□□□ -1.67
BRAT1-203ENST00000467558 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
BRAT1-203ENST00000467558 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
BRAT1-203ENST00000467558 KRTAP9-2Q9BYQ4 174 aa4.54□□□□□ -1.68
BRAT1-203ENST00000467558 SYNE1Q8NF91 8797 aaKnown RBP4.54□□□□□ -1.68
BRAT1-203ENST00000467558 LCE2DQ5TA82 110 aaPredicted RBP4.53□□□□□ -1.68
BRAT1-203ENST00000467558 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
BRAT1-203ENST00000467558 MT1MQ8N339 61 aa4.45□□□□□ -1.7
BRAT1-203ENST00000467558 KRTAP19-7Q3SYF9 63 aa4.45□□□□□ -1.7
BRAT1-203ENST00000467558 KMT2DO14686 5537 aa4.43□□□□□ -1.7
BRAT1-203ENST00000467558 KRTAP9-6A0A140TA67 174 aa4.41□□□□□ -1.7
BRAT1-203ENST00000467558 LCE3DQ9BYE3 92 aa4.33□□□□□ -1.72
BRAT1-203ENST00000467558 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
BRAT1-203ENST00000467558 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
BRAT1-203ENST00000467558 LOC100996750A0A140TA64 210 aa4.26□□□□□ -1.73
BRAT1-203ENST00000467558 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
BRAT1-203ENST00000467558 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
BRAT1-203ENST00000467558 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
BRAT1-203ENST00000467558 SSPOA2VEC9 5147 aa4.17□□□□□ -1.74
BRAT1-203ENST00000467558 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
BRAT1-203ENST00000467558 MT3P25713 68 aa4.15□□□□□ -1.75
BRAT1-203ENST00000467558 MUC12Q9UKN1 5478 aa4.11□□□□□ -1.75
BRAT1-203ENST00000467558 MT1AP04731 61 aa4.1□□□□□ -1.75
BRAT1-203ENST00000467558 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
BRAT1-203ENST00000467558 KRTAP2-3P0C7H8 128 aa4.08□□□□□ -1.76
BRAT1-203ENST00000467558 KRTAP2-4Q9BYR9 128 aa4.08□□□□□ -1.76
BRAT1-203ENST00000467558 KRTAP2-1Q9BYU5 128 aa4.08□□□□□ -1.76
BRAT1-203ENST00000467558 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
BRAT1-203ENST00000467558 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
BRAT1-203ENST00000467558 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
BRAT1-203ENST00000467558 MT4P47944 62 aa4.05□□□□□ -1.76
BRAT1-203ENST00000467558 KRTAP6-3Q3LI67 103 aa4.04□□□□□ -1.76
BRAT1-203ENST00000467558 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
BRAT1-203ENST00000467558 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
BRAT1-203ENST00000467558 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
BRAT1-203ENST00000467558 KRTAP4-9Q9BYQ8 210 aa3.87□□□□□ -1.79
BRAT1-203ENST00000467558 PRM1P04553 51 aa3.83□□□□□ -1.8
BRAT1-203ENST00000467558 KRTAP20-1Q3LI63 56 aa3.81□□□□□ -1.8
BRAT1-203ENST00000467558 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
BRAT1-203ENST00000467558 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
BRAT1-203ENST00000467558 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
BRAT1-203ENST00000467558 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
BRAT1-203ENST00000467558 LCE4AQ5TA78 99 aa3.74□□□□□ -1.81
BRAT1-203ENST00000467558 KRTAP5-9P26371 169 aa3.71□□□□□ -1.82
BRAT1-203ENST00000467558 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
BRAT1-203ENST00000467558 MDN1Q9NU22 5596 aa3.65□□□□□ -1.82
BRAT1-203ENST00000467558 NEBP20929 6669 aa3.44□□□□□ -1.86
BRAT1-203ENST00000467558 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
BRAT1-203ENST00000467558 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
BRAT1-203ENST00000467558 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
BRAT1-203ENST00000467558 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
BRAT1-203ENST00000467558 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
BRAT1-203ENST00000467558 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
BRAT1-203ENST00000467558 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
BRAT1-203ENST00000467558 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
BRAT1-203ENST00000467558 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
BRAT1-203ENST00000467558 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
BRAT1-203ENST00000467558 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
BRAT1-203ENST00000467558 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
BRAT1-203ENST00000467558 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
BRAT1-203ENST00000467558 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
BRAT1-203ENST00000467558 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
BRAT1-203ENST00000467558 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
BRAT1-203ENST00000467558 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
BRAT1-203ENST00000467558 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
BRAT1-203ENST00000467558 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
BRAT1-203ENST00000467558 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
BRAT1-203ENST00000467558 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
BRAT1-203ENST00000467558 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
BRAT1-203ENST00000467558 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
BRAT1-203ENST00000467558 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
BRAT1-203ENST00000467558 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
BRAT1-203ENST00000467558 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
BRAT1-203ENST00000467558 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
BRAT1-203ENST00000467558 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
BRAT1-203ENST00000467558 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
BRAT1-203ENST00000467558 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
BRAT1-203ENST00000467558 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms