RNA–Protein interactions for RNA: ENST00000466405.1

WDR48-208, Transcript of WD repeat domain 48, humanhuman

TSL 1 (best)

Gene WDR48, Length 4,925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-208ENST00000466405 KRTAP9-3Q9BYQ3 159 aa2.16□□□□□ -2.06
WDR48-208ENST00000466405 KRTAP9-9Q9BYP9 154 aa2.15□□□□□ -2.07
WDR48-208ENST00000466405 KRTAP9-4Q9BYQ2 154 aa2.15□□□□□ -2.07
WDR48-208ENST00000466405 KRTAP2-3P0C7H8 128 aa2.15□□□□□ -2.07
WDR48-208ENST00000466405 KRTAP2-4Q9BYR9 128 aa2.15□□□□□ -2.07
WDR48-208ENST00000466405 KRTAP2-1Q9BYU5 128 aa2.15□□□□□ -2.07
WDR48-208ENST00000466405 MT1LQ93083 61 aa2.12□□□□□ -2.07
WDR48-208ENST00000466405 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.12□□□□□ -2.07
WDR48-208ENST00000466405 LCE3DQ9BYE3 92 aa2.1□□□□□ -2.07
WDR48-208ENST00000466405 LCE3EQ5T5B0 92 aa2.09□□□□□ -2.07
WDR48-208ENST00000466405 SPRR2FQ96RM1 72 aa2.08□□□□□ -2.08
WDR48-208ENST00000466405 MT1EP04732 61 aa2.08□□□□□ -2.08
WDR48-208ENST00000466405 KRTAP9-2Q9BYQ4 174 aa2.08□□□□□ -2.08
WDR48-208ENST00000466405 KRTAP9-6A8MVA2 160 aa2.08□□□□□ -2.08
WDR48-208ENST00000466405 PRM1P04553 51 aa2.05□□□□□ -2.08
WDR48-208ENST00000466405 KRTAP4-2Q9BYR5 136 aa2.03□□□□□ -2.08
WDR48-208ENST00000466405 KRTAP19-7Q3SYF9 63 aa2.03□□□□□ -2.08
WDR48-208ENST00000466405 USH2AO75445 5202 aa2.02□□□□□ -2.09
WDR48-208ENST00000466405 KRTAP19-3Q7Z4W3 81 aa2□□□□□ -2.09
WDR48-208ENST00000466405 KRTAP4-12Q9BQ66 201 aa2□□□□□ -2.09
WDR48-208ENST00000466405 KRTAP4-3Q9BYR4 195 aa2□□□□□ -2.09
WDR48-208ENST00000466405 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
WDR48-208ENST00000466405 MT1MQ8N339 61 aa1.98□□□□□ -2.09
WDR48-208ENST00000466405 KRTAP4-9Q9BYQ8 210 aa1.95□□□□□ -2.1
WDR48-208ENST00000466405 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
WDR48-208ENST00000466405 FSIP2Q5CZC0 6907 aa1.91□□□□□ -2.1
WDR48-208ENST00000466405 SSPOA2VEC9 5147 aa1.9□□□□□ -2.11
WDR48-208ENST00000466405 LCE5AQ5TCM9 118 aa1.89□□□□□ -2.11
WDR48-208ENST00000466405 MT1AP04731 61 aa1.87□□□□□ -2.11
WDR48-208ENST00000466405 SPRR2EP22531 72 aa1.86□□□□□ -2.11
WDR48-208ENST00000466405 SPRR2BP35325 72 aa1.86□□□□□ -2.11
WDR48-208ENST00000466405 SPRR2AP35326 72 aa1.86□□□□□ -2.11
WDR48-208ENST00000466405 KMT2DO14686 5537 aa1.85□□□□□ -2.11
WDR48-208ENST00000466405 OBSCNQ5VST9 7968 aa1.84□□□□□ -2.11
WDR48-208ENST00000466405 KRTAP6-2Q3LI66 62 aa1.83□□□□□ -2.12
WDR48-208ENST00000466405 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
WDR48-208ENST00000466405 KRTAP19-6Q3LI70 58 aa1.81□□□□□ -2.12
WDR48-208ENST00000466405 KRTAP6-1Q3LI64 71 aa1.8□□□□□ -2.12
WDR48-208ENST00000466405 FCGBPQ9Y6R7 5405 aaPredicted RBP1.8□□□□□ -2.12
WDR48-208ENST00000466405 SPRR2DP22532 72 aa1.78□□□□□ -2.12
WDR48-208ENST00000466405 LCE1DQ5T752 114 aa1.77□□□□□ -2.13
WDR48-208ENST00000466405 LCE1FQ5T754 118 aa1.73□□□□□ -2.13
WDR48-208ENST00000466405 KRTAP5-9P26371 169 aa1.73□□□□□ -2.13
WDR48-208ENST00000466405 KRTAP2-2Q9BYT5 123 aa1.71□□□□□ -2.14
WDR48-208ENST00000466405 MUC12Q9UKN1 5478 aa1.71□□□□□ -2.14
WDR48-208ENST00000466405 KRTAP4-11Q9BYQ6 195 aa1.7□□□□□ -2.14
WDR48-208ENST00000466405 SYNE2Q8WXH0 6885 aaKnown RBP1.69□□□□□ -2.14
WDR48-208ENST00000466405 DSTQ03001 7570 aaKnown RBP1.68□□□□□ -2.14
WDR48-208ENST00000466405 MACF1Q9UPN3 7388 aaKnown RBP1.68□□□□□ -2.14
WDR48-208ENST00000466405 LCE1AQ5T7P2 110 aa1.67□□□□□ -2.14
WDR48-208ENST00000466405 MDN1Q9NU22 5596 aa1.65□□□□□ -2.15
WDR48-208ENST00000466405 KRTAP5-5Q701N2 237 aaPredicted RBP1.64□□□□□ -2.15
WDR48-208ENST00000466405 LCE1BQ5T7P3 118 aa1.63□□□□□ -2.15
WDR48-208ENST00000466405 KRTAP6-3Q3LI67 103 aa1.62□□□□□ -2.15
WDR48-208ENST00000466405 MT4P47944 62 aa1.6□□□□□ -2.15
WDR48-208ENST00000466405 KRTAP5-4Q6L8H1 288 aa1.57□□□□□ -2.16
WDR48-208ENST00000466405 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
WDR48-208ENST00000466405 LCE1EQ5T753 118 aa1.56□□□□□ -2.16
WDR48-208ENST00000466405 HMCN1Q96RW7 5635 aa1.52□□□□□ -2.17
WDR48-208ENST00000466405 GPR98Q8WXG9 6306 aa1.48□□□□□ -2.17
WDR48-208ENST00000466405 LCE1CQ5T751 118 aa1.47□□□□□ -2.17
WDR48-208ENST00000466405 KRTAP20-1Q3LI63 56 aa1.44□□□□□ -2.18
WDR48-208ENST00000466405 KRTAP4-4Q9BYR3 166 aa1.38□□□□□ -2.19
WDR48-208ENST00000466405 NEBP20929 6669 aa1.37□□□□□ -2.19
WDR48-208ENST00000466405 KRTAP5-8O75690 187 aa1.33□□□□□ -2.2
WDR48-208ENST00000466405 KRTAP20-2Q3LI61 65 aa1.29□□□□□ -2.2
WDR48-208ENST00000466405 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
WDR48-208ENST00000466405 KRTAP5-10Q6L8G5 202 aa1.21□□□□□ -2.22
WDR48-208ENST00000466405 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
WDR48-208ENST00000466405 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
WDR48-208ENST00000466405 KRTAP5-1Q6L8H4 278 aa1.15□□□□□ -2.22
WDR48-208ENST00000466405 AHNAK2Q8IVF2 5795 aa1.08□□□□□ -2.24
WDR48-208ENST00000466405 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
WDR48-208ENST00000466405 KRTAP21-2Q3LI59 83 aa1□□□□□ -2.25
WDR48-208ENST00000466405 KRTAP5-7Q6L8G8 165 aa0.97□□□□□ -2.25
WDR48-208ENST00000466405 AHNAKQ09666 5890 aaKnown RBP0.9□□□□□ -2.27
WDR48-208ENST00000466405 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
WDR48-208ENST00000466405 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 171.9 ms