RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
SMC3-202ENST00000462899 TRAV7A0A075B6U4 112 aa2.55□□□□□ -2
SMC3-202ENST00000462899 LOC105371267A0A1B0GV96 52 aa2.54□□□□□ -2
SMC3-202ENST00000462899 KRTAP12-4P60329 112 aa2.54□□□□□ -2
SMC3-202ENST00000462899 ATP5EP2Q5VTU8 51 aa2.54□□□□□ -2
SMC3-202ENST00000462899 MP68P56378 58 aa2.53□□□□□ -2
SMC3-202ENST00000462899 SMIM6P0DI80 62 aa2.52□□□□□ -2.01
SMC3-202ENST00000462899 HIST1H4AP62805 103 aaKnown RBP2.52□□□□□ -2.01
SMC3-202ENST00000462899 C10orf95Q9H7T3 257 aa2.52□□□□□ -2.01
SMC3-202ENST00000462899 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
SMC3-202ENST00000462899 ETDBQ3ZM63 59 aa2.51□□□□□ -2.01
SMC3-202ENST00000462899 SPTSSBQ8NFR3 76 aa2.5□□□□□ -2.01
SMC3-202ENST00000462899 H3BPC8 53 aa2.49□□□□□ -2.01
SMC3-202ENST00000462899 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
SMC3-202ENST00000462899 FAM240AA0A1B0GVK7 77 aa2.46□□□□□ -2.02
SMC3-202ENST00000462899 F8W1H4 67 aa2.46□□□□□ -2.02
SMC3-202ENST00000462899 ACYP2P14621 99 aa2.45□□□□□ -2.02
SMC3-202ENST00000462899 GTF2H5Q6ZYL4 71 aa2.45□□□□□ -2.02
SMC3-202ENST00000462899 COL5A1-AS1Q5SY13 56 aa2.44□□□□□ -2.02
SMC3-202ENST00000462899 KRTAP12-1P59990 96 aa2.41□□□□□ -2.02
SMC3-202ENST00000462899 CHKB-CPT1BH3BT56 60 aa2.4□□□□□ -2.03
SMC3-202ENST00000462899 LINC00643Q86TS7 51 aa2.38□□□□□ -2.03
SMC3-202ENST00000462899 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
SMC3-202ENST00000462899 KRTAP12-3P60328 96 aa2.37□□□□□ -2.03
SMC3-202ENST00000462899 SPINT4Q6UDR6 99 aa2.36□□□□□ -2.03
SMC3-202ENST00000462899 PCP4L1A6NKN8 68 aa2.35□□□□□ -2.03
SMC3-202ENST00000462899 SPATA8Q6RVD6 105 aa2.35□□□□□ -2.03
SMC3-202ENST00000462899 J3QR89 54 aa2.32□□□□□ -2.04
SMC3-202ENST00000462899 TNP1P09430 55 aa2.32□□□□□ -2.04
SMC3-202ENST00000462899 KRTAP6-1Q3LI64 71 aa2.31□□□□□ -2.04
SMC3-202ENST00000462899 SCGB1A1P11684 91 aa2.3□□□□□ -2.04
SMC3-202ENST00000462899 MT1AP04731 61 aa2.29□□□□□ -2.04
SMC3-202ENST00000462899 SEC61GP60059 68 aa2.27□□□□□ -2.05
SMC3-202ENST00000462899 SMIM20Q8N5G0 67 aa2.27□□□□□ -2.05
SMC3-202ENST00000462899 A0A1B0GV90 55 aa2.25□□□□□ -2.05
SMC3-202ENST00000462899 KRTAP6-2Q3LI66 62 aa2.25□□□□□ -2.05
SMC3-202ENST00000462899 SERP1Q9Y6X1 66 aa2.25□□□□□ -2.05
SMC3-202ENST00000462899 A0A1B0GU33 70 aa2.24□□□□□ -2.05
SMC3-202ENST00000462899 SPANXA2-OT1Q8N9U9 137 aa2.23□□□□□ -2.05
SMC3-202ENST00000462899 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
SMC3-202ENST00000462899 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
SMC3-202ENST00000462899 SNURFQ9Y675 71 aa2.18□□□□□ -2.06
SMC3-202ENST00000462899 SMIM26A0A096LP01 95 aa2.17□□□□□ -2.06
SMC3-202ENST00000462899 COA5Q86WW8 74 aa2.17□□□□□ -2.06
SMC3-202ENST00000462899 K7ERU9 68 aa2.16□□□□□ -2.06
SMC3-202ENST00000462899 KRTAP25-1Q3LHN0 102 aa2.11□□□□□ -2.07
SMC3-202ENST00000462899 SERP2Q8N6R1 65 aa2.08□□□□□ -2.08
SMC3-202ENST00000462899 A0A1B0GU69 56 aa2.03□□□□□ -2.08
SMC3-202ENST00000462899 PRR15LQ9BU68 103 aa2□□□□□ -2.09
SMC3-202ENST00000462899 COX7CP15954 63 aa1.96□□□□□ -2.1
SMC3-202ENST00000462899 ATP5EP56381 51 aaPredicted RBP1.94□□□□□ -2.1
SMC3-202ENST00000462899 ANAPC13Q9BS18 74 aa1.94□□□□□ -2.1
SMC3-202ENST00000462899 H7BZZ5 65 aa1.92□□□□□ -2.1
SMC3-202ENST00000462899 K7ERS5 55 aa1.91□□□□□ -2.1
SMC3-202ENST00000462899 CCDC179H3BU77 68 aa1.89□□□□□ -2.11
SMC3-202ENST00000462899 UQCR11O14957 56 aa1.87□□□□□ -2.11
SMC3-202ENST00000462899 TMEM258P61165 79 aa1.87□□□□□ -2.11
SMC3-202ENST00000462899 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
SMC3-202ENST00000462899 V9GYY9 64 aa1.84□□□□□ -2.11
SMC3-202ENST00000462899 LINC01558Q9Y6Z2 57 aa1.83□□□□□ -2.12
SMC3-202ENST00000462899 RPS28P62857 69 aaKnown RBP1.8□□□□□ -2.12
SMC3-202ENST00000462899 MIR22HGQ0VDD5 57 aa1.77□□□□□ -2.13
SMC3-202ENST00000462899 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
SMC3-202ENST00000462899 Q1T7F1 81 aa1.74□□□□□ -2.13
SMC3-202ENST00000462899 CDC42SE1Q9NRR8 79 aa1.7□□□□□ -2.14
SMC3-202ENST00000462899 PSPHP1O15172 72 aa1.66□□□□□ -2.14
SMC3-202ENST00000462899 A6NED7 52 aa1.65□□□□□ -2.15
SMC3-202ENST00000462899 ROMO1P60602 79 aa1.62□□□□□ -2.15
SMC3-202ENST00000462899 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
SMC3-202ENST00000462899 BRK1Q8WUW1 75 aa1.54□□□□□ -2.16
SMC3-202ENST00000462899 PRO0628Q9UI54 55 aa1.51□□□□□ -2.17
SMC3-202ENST00000462899 PMAIP1Q13794 54 aa1.46□□□□□ -2.18
SMC3-202ENST00000462899 LUZP6Q538Z0 58 aa1.46□□□□□ -2.18
SMC3-202ENST00000462899 KTN1-AS1Q86SY8 53 aa1.4□□□□□ -2.19
SMC3-202ENST00000462899 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
SMC3-202ENST00000462899 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
SMC3-202ENST00000462899 INE1O15225 51 aa0.91□□□□□ -2.26
SMC3-202ENST00000462899 PRM1P04553 51 aa0.79□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 125.3 ms