RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.26□□□□□ -2.21
COL8A1-204ENST00000462604 KRTAP9-2Q9BYQ4 174 aa1.26□□□□□ -2.21
COL8A1-204ENST00000462604 KRTAP4-8Q9BYQ9 185 aa1.26□□□□□ -2.21
COL8A1-204ENST00000462604 USH2AO75445 5202 aa1.23□□□□□ -2.21
COL8A1-204ENST00000462604 KRTAP2-3P0C7H8 128 aa1.23□□□□□ -2.21
COL8A1-204ENST00000462604 KRTAP2-4Q9BYR9 128 aa1.23□□□□□ -2.21
COL8A1-204ENST00000462604 KRTAP2-1Q9BYU5 128 aa1.23□□□□□ -2.21
COL8A1-204ENST00000462604 KRTAP9-6A8MVA2 160 aa1.22□□□□□ -2.21
COL8A1-204ENST00000462604 KRTAP19-7Q3SYF9 63 aa1.22□□□□□ -2.21
COL8A1-204ENST00000462604 KRTAP4-8A0A0G2JLE6 195 aa1.21□□□□□ -2.22
COL8A1-204ENST00000462604 LCE3BQ5TA77 95 aa1.21□□□□□ -2.22
COL8A1-204ENST00000462604 MT1LQ93083 61 aa1.21□□□□□ -2.22
COL8A1-204ENST00000462604 MT1EP04732 61 aa1.2□□□□□ -2.22
COL8A1-204ENST00000462604 KMT2DO14686 5537 aa1.2□□□□□ -2.22
COL8A1-204ENST00000462604 KRTAP4-7Q9BYR0 210 aa1.18□□□□□ -2.22
COL8A1-204ENST00000462604 LCE1DQ5T752 114 aa1.15□□□□□ -2.23
COL8A1-204ENST00000462604 SSPOA2VEC9 5147 aa1.15□□□□□ -2.23
COL8A1-204ENST00000462604 KRTAP19-6Q3LI70 58 aa1.14□□□□□ -2.23
COL8A1-204ENST00000462604 LCE1EQ5T753 118 aa1.14□□□□□ -2.23
COL8A1-204ENST00000462604 MT1GP13640 62 aa1.12□□□□□ -2.23
COL8A1-204ENST00000462604 KRTAP6-3Q3LI67 103 aa1.12□□□□□ -2.23
COL8A1-204ENST00000462604 KRTAP19-3Q7Z4W3 81 aa1.12□□□□□ -2.23
COL8A1-204ENST00000462604 MT1MQ8N339 61 aa1.12□□□□□ -2.23
COL8A1-204ENST00000462604 LCE3EQ5T5B0 92 aa1.11□□□□□ -2.23
COL8A1-204ENST00000462604 KRTAP4-3Q9BYR4 195 aa1.1□□□□□ -2.23
COL8A1-204ENST00000462604 CRCT1Q9UGL9 99 aa1.1□□□□□ -2.23
COL8A1-204ENST00000462604 KRTAP12-4P60329 112 aa1.09□□□□□ -2.23
COL8A1-204ENST00000462604 KRTAP4-9Q9BYQ8 210 aa1.09□□□□□ -2.23
COL8A1-204ENST00000462604 KRTAP4-11Q9BYQ6 195 aa1.08□□□□□ -2.24
COL8A1-204ENST00000462604 FCGBPQ9Y6R7 5405 aaPredicted RBP1.08□□□□□ -2.24
COL8A1-204ENST00000462604 MUC12Q9UKN1 5478 aa1.05□□□□□ -2.24
COL8A1-204ENST00000462604 MT1AP04731 61 aa1.05□□□□□ -2.24
COL8A1-204ENST00000462604 SPRR2FQ96RM1 72 aa1.05□□□□□ -2.24
COL8A1-204ENST00000462604 KRTAP4-2Q9BYR5 136 aa1.04□□□□□ -2.24
COL8A1-204ENST00000462604 MACF1Q9UPN3 7388 aaKnown RBP1.04□□□□□ -2.24
COL8A1-204ENST00000462604 FSIP2Q5CZC0 6907 aa1.03□□□□□ -2.24
COL8A1-204ENST00000462604 LCE3DQ9BYE3 92 aa1.02□□□□□ -2.25
COL8A1-204ENST00000462604 SYNE2Q8WXH0 6885 aaKnown RBP1.01□□□□□ -2.25
COL8A1-204ENST00000462604 KRTAP6-1Q3LI64 71 aa1.01□□□□□ -2.25
COL8A1-204ENST00000462604 MDN1Q9NU22 5596 aa1.01□□□□□ -2.25
COL8A1-204ENST00000462604 PRM1P04553 51 aa0.98□□□□□ -2.25
COL8A1-204ENST00000462604 DSTQ03001 7570 aaKnown RBP0.98□□□□□ -2.25
COL8A1-204ENST00000462604 KRTAP5-5Q701N2 237 aaPredicted RBP0.97□□□□□ -2.25
COL8A1-204ENST00000462604 SYNE1Q8NF91 8797 aaKnown RBP0.96□□□□□ -2.26
COL8A1-204ENST00000462604 SPRR2EP22531 72 aa0.96□□□□□ -2.26
COL8A1-204ENST00000462604 SPRR2BP35325 72 aa0.96□□□□□ -2.26
COL8A1-204ENST00000462604 SPRR2AP35326 72 aa0.96□□□□□ -2.26
COL8A1-204ENST00000462604 KRTAP5-9P26371 169 aa0.95□□□□□ -2.26
COL8A1-204ENST00000462604 KRTAP6-2Q3LI66 62 aa0.94□□□□□ -2.26
COL8A1-204ENST00000462604 SPRR2DP22532 72 aa0.93□□□□□ -2.26
COL8A1-204ENST00000462604 NEBP20929 6669 aa0.92□□□□□ -2.26
COL8A1-204ENST00000462604 KRTAP5-3Q6L8H2 238 aa0.87□□□□□ -2.27
COL8A1-204ENST00000462604 OBSCNQ5VST9 7968 aa0.86□□□□□ -2.27
COL8A1-204ENST00000462604 KRTAP5-4Q6L8H1 288 aa0.84□□□□□ -2.27
COL8A1-204ENST00000462604 HMCN1Q96RW7 5635 aa0.83□□□□□ -2.28
COL8A1-204ENST00000462604 MUC5ACP98088 5654 aa0.8□□□□□ -2.28
COL8A1-204ENST00000462604 MT4P47944 62 aa0.79□□□□□ -2.28
COL8A1-204ENST00000462604 KRTAP20-2Q3LI61 65 aa0.79□□□□□ -2.28
COL8A1-204ENST00000462604 KRTAP5-2Q701N4 177 aa0.79□□□□□ -2.28
COL8A1-204ENST00000462604 KRTAP20-1Q3LI63 56 aa0.75□□□□□ -2.29
COL8A1-204ENST00000462604 LCE1BQ5T7P3 118 aa0.73□□□□□ -2.29
COL8A1-204ENST00000462604 KRTAP5-11Q6L8G4 156 aa0.73□□□□□ -2.29
COL8A1-204ENST00000462604 KRTAP5-10Q6L8G5 202 aa0.72□□□□□ -2.29
COL8A1-204ENST00000462604 LCE1CQ5T751 118 aa0.71□□□□□ -2.3
COL8A1-204ENST00000462604 KRTAP5-1Q6L8H4 278 aa0.71□□□□□ -2.3
COL8A1-204ENST00000462604 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
COL8A1-204ENST00000462604 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.66□□□□□ -2.3
COL8A1-204ENST00000462604 KRTAP21-2Q3LI59 83 aa0.64□□□□□ -2.31
COL8A1-204ENST00000462604 KRTAP5-8O75690 187 aa0.62□□□□□ -2.31
COL8A1-204ENST00000462604 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
COL8A1-204ENST00000462604 MUC5BQ9HC84 5762 aaPredicted RBP0.62□□□□□ -2.31
COL8A1-204ENST00000462604 KRTAP5-7Q6L8G8 165 aa0.61□□□□□ -2.31
COL8A1-204ENST00000462604 GPR98Q8WXG9 6306 aa0.59□□□□□ -2.31
COL8A1-204ENST00000462604 KRTAP4-4Q9BYR3 166 aa0.58□□□□□ -2.32
COL8A1-204ENST00000462604 AHNAKQ09666 5890 aaKnown RBP0.53□□□□□ -2.33
COL8A1-204ENST00000462604 MUC19Q7Z5P9 8384 aa0.52□□□□□ -2.33
COL8A1-204ENST00000462604 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
COL8A1-204ENST00000462604 MUC16Q8WXI7 14507 aa0.4□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 122.6 ms