RNA–Protein interactions for RNA: ENST00000462309.1

COL4A2-203, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-203ENST00000462309 MT1HL1P0DM35 61 aa2.52□□□□□ -2.01
COL4A2-203ENST00000462309 PLAC4Q8WY50 150 aa2.52□□□□□ -2.01
COL4A2-203ENST00000462309 C9orf92A6NGG3 77 aa2.5□□□□□ -2.01
COL4A2-203ENST00000462309 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
COL4A2-203ENST00000462309 C10orf95Q9H7T3 257 aa2.49□□□□□ -2.01
COL4A2-203ENST00000462309 ABCA13Q86UQ4 5058 aa2.47□□□□□ -2.01
COL4A2-203ENST00000462309 PKHD1L1Q86WI1 4243 aa2.47□□□□□ -2.01
COL4A2-203ENST00000462309 LRP1Q07954 4544 aaKnown RBP2.47□□□□□ -2.01
COL4A2-203ENST00000462309 MYCBP2O75592 4640 aa2.46□□□□□ -2.02
COL4A2-203ENST00000462309 FAT3Q8TDW7 4589 aa2.44□□□□□ -2.02
COL4A2-203ENST00000462309 TNXBP22105 4242 aa2.42□□□□□ -2.02
COL4A2-203ENST00000462309 HERC1Q15751 4861 aa2.39□□□□□ -2.03
COL4A2-203ENST00000462309 UBR4Q5T4S7 5183 aa2.38□□□□□ -2.03
COL4A2-203ENST00000462309 TNP1P09430 55 aa2.31□□□□□ -2.04
COL4A2-203ENST00000462309 LRP2P98164 4655 aa2.3□□□□□ -2.04
COL4A2-203ENST00000462309 HMCN2Q8NDA2 5059 aa2.3□□□□□ -2.04
COL4A2-203ENST00000462309 LPAP08519 4548 aa2.27□□□□□ -2.05
COL4A2-203ENST00000462309 KRTAP4-1Q9BYQ7 146 aa2.22□□□□□ -2.05
COL4A2-203ENST00000462309 MUC17Q685J3 4493 aa2.21□□□□□ -2.06
COL4A2-203ENST00000462309 KRTAP19-2Q3LHN2 52 aa2.19□□□□□ -2.06
COL4A2-203ENST00000462309 RNF213Q63HN8 5207 aa2.14□□□□□ -2.07
COL4A2-203ENST00000462309 MUC2Q02817 5179 aa2.13□□□□□ -2.07
COL4A2-203ENST00000462309 MT1HP80294 61 aa2.13□□□□□ -2.07
COL4A2-203ENST00000462309 CRCT1Q9UGL9 99 aa2.12□□□□□ -2.07
COL4A2-203ENST00000462309 FAT4Q6V0I7 4981 aa2.1□□□□□ -2.07
COL4A2-203ENST00000462309 FLGP20930 4061 aaPredicted RBP2.07□□□□□ -2.08
COL4A2-203ENST00000462309 KRTAP8-1Q8IUC2 63 aa2.06□□□□□ -2.08
COL4A2-203ENST00000462309 M0R2T5 61 aa2.05□□□□□ -2.08
COL4A2-203ENST00000462309 SPRR2GQ9BYE4 73 aa2.03□□□□□ -2.08
COL4A2-203ENST00000462309 MT2AP02795 61 aa1.99□□□□□ -2.09
COL4A2-203ENST00000462309 MT1FP04733 61 aa1.97□□□□□ -2.09
COL4A2-203ENST00000462309 FSIP2Q5CZC0 6907 aa1.96□□□□□ -2.1
COL4A2-203ENST00000462309 FCGBPQ9Y6R7 5405 aaPredicted RBP1.93□□□□□ -2.1
COL4A2-203ENST00000462309 KRTAP19-8Q3LI54 63 aa1.91□□□□□ -2.1
COL4A2-203ENST00000462309 KRTAP19-6Q3LI70 58 aa1.9□□□□□ -2.11
COL4A2-203ENST00000462309 MT1BP07438 61 aa1.83□□□□□ -2.12
COL4A2-203ENST00000462309 KRTAP2-3P0C7H8 128 aa1.82□□□□□ -2.12
COL4A2-203ENST00000462309 KRTAP2-4Q9BYR9 128 aa1.82□□□□□ -2.12
COL4A2-203ENST00000462309 KRTAP2-1Q9BYU5 128 aa1.82□□□□□ -2.12
COL4A2-203ENST00000462309 MT1XP80297 61 aa1.81□□□□□ -2.12
COL4A2-203ENST00000462309 USH2AO75445 5202 aa1.81□□□□□ -2.12
COL4A2-203ENST00000462309 SSPOA2VEC9 5147 aa1.79□□□□□ -2.12
COL4A2-203ENST00000462309 KRTAP19-5Q3LI72 72 aa1.73□□□□□ -2.13
COL4A2-203ENST00000462309 SYNE2Q8WXH0 6885 aaKnown RBP1.7□□□□□ -2.14
COL4A2-203ENST00000462309 MACF1Q9UPN3 7388 aaKnown RBP1.66□□□□□ -2.14
COL4A2-203ENST00000462309 MT1EP04732 61 aa1.66□□□□□ -2.14
COL4A2-203ENST00000462309 KRTAP20-1Q3LI63 56 aa1.64□□□□□ -2.15
COL4A2-203ENST00000462309 MT1LQ93083 61 aa1.64□□□□□ -2.15
COL4A2-203ENST00000462309 NEBP20929 6669 aa1.64□□□□□ -2.15
COL4A2-203ENST00000462309 SPRR2FQ96RM1 72 aa1.62□□□□□ -2.15
COL4A2-203ENST00000462309 KRTAP19-7Q3SYF9 63 aa1.6□□□□□ -2.15
COL4A2-203ENST00000462309 SPRR2EP22531 72 aa1.59□□□□□ -2.15
COL4A2-203ENST00000462309 SPRR2BP35325 72 aa1.59□□□□□ -2.15
COL4A2-203ENST00000462309 SPRR2AP35326 72 aa1.59□□□□□ -2.15
COL4A2-203ENST00000462309 MT1AP04731 61 aa1.58□□□□□ -2.16
COL4A2-203ENST00000462309 KMT2DO14686 5537 aa1.56□□□□□ -2.16
COL4A2-203ENST00000462309 GPR98Q8WXG9 6306 aa1.54□□□□□ -2.16
COL4A2-203ENST00000462309 MUC12Q9UKN1 5478 aa1.53□□□□□ -2.16
COL4A2-203ENST00000462309 MT1GP13640 62 aa1.53□□□□□ -2.16
COL4A2-203ENST00000462309 SPRR2DP22532 72 aa1.53□□□□□ -2.16
COL4A2-203ENST00000462309 KRTAP19-3Q7Z4W3 81 aa1.5□□□□□ -2.17
COL4A2-203ENST00000462309 MDN1Q9NU22 5596 aa1.46□□□□□ -2.18
COL4A2-203ENST00000462309 MT1MQ8N339 61 aa1.46□□□□□ -2.18
COL4A2-203ENST00000462309 PRM1P04553 51 aa1.43□□□□□ -2.18
COL4A2-203ENST00000462309 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.19
COL4A2-203ENST00000462309 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
COL4A2-203ENST00000462309 DSTQ03001 7570 aaKnown RBP1.35□□□□□ -2.19
COL4A2-203ENST00000462309 MT4P47944 62 aa1.33□□□□□ -2.2
COL4A2-203ENST00000462309 KRTAP5-10Q6L8G5 202 aa1.33□□□□□ -2.2
COL4A2-203ENST00000462309 KRTAP6-2Q3LI66 62 aa1.32□□□□□ -2.2
COL4A2-203ENST00000462309 KRTAP6-1Q3LI64 71 aa1.31□□□□□ -2.2
COL4A2-203ENST00000462309 KRTAP20-2Q3LI61 65 aa1.29□□□□□ -2.2
COL4A2-203ENST00000462309 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
COL4A2-203ENST00000462309 AHNAKQ09666 5890 aaKnown RBP1.16□□□□□ -2.22
COL4A2-203ENST00000462309 MUC5ACP98088 5654 aa1.12□□□□□ -2.23
COL4A2-203ENST00000462309 MUC5BQ9HC84 5762 aaPredicted RBP1.11□□□□□ -2.23
COL4A2-203ENST00000462309 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
COL4A2-203ENST00000462309 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 52.1 ms