RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 Q1T7F1 81 aa2.4□□□□□ -2.03
PTPN12-209ENST00000460731 SMIM26A0A096LP01 95 aa2.38□□□□□ -2.03
PTPN12-209ENST00000460731 PRR15LQ9BU68 103 aa2.37□□□□□ -2.03
PTPN12-209ENST00000460731 V9GYY9 64 aa2.37□□□□□ -2.03
PTPN12-209ENST00000460731 MT1XP80297 61 aa2.36□□□□□ -2.03
PTPN12-209ENST00000460731 PLAC4Q8WY50 150 aa2.36□□□□□ -2.03
PTPN12-209ENST00000460731 SPATA8Q6RVD6 105 aa2.35□□□□□ -2.03
PTPN12-209ENST00000460731 LINC01554Q52M75 96 aa2.33□□□□□ -2.04
PTPN12-209ENST00000460731 UQCR11O14957 56 aa2.32□□□□□ -2.04
PTPN12-209ENST00000460731 KRTAP12-1P59990 96 aa2.32□□□□□ -2.04
PTPN12-209ENST00000460731 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
PTPN12-209ENST00000460731 PRO2289Q9P1D8 64 aa2.31□□□□□ -2.04
PTPN12-209ENST00000460731 MACF1Q9UPN3 7388 aaKnown RBP2.3□□□□□ -2.04
PTPN12-209ENST00000460731 PSPHP1O15172 72 aa2.29□□□□□ -2.04
PTPN12-209ENST00000460731 A0A0D9SG42 100 aa2.28□□□□□ -2.04
PTPN12-209ENST00000460731 MIR22HGQ0VDD5 57 aa2.26□□□□□ -2.05
PTPN12-209ENST00000460731 PP632Q6XCG6 107 aa2.25□□□□□ -2.05
PTPN12-209ENST00000460731 SPINT4Q6UDR6 99 aa2.24□□□□□ -2.05
PTPN12-209ENST00000460731 CAMK2N1Q7Z7J9 78 aa2.24□□□□□ -2.05
PTPN12-209ENST00000460731 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
PTPN12-209ENST00000460731 SYNE2Q8WXH0 6885 aaKnown RBP2.24□□□□□ -2.05
PTPN12-209ENST00000460731 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
PTPN12-209ENST00000460731 A6NED7 52 aa2.21□□□□□ -2.06
PTPN12-209ENST00000460731 C10orf95Q9H7T3 257 aa2.21□□□□□ -2.06
PTPN12-209ENST00000460731 CDC42SE1Q9NRR8 79 aa2.2□□□□□ -2.06
PTPN12-209ENST00000460731 KMT2DO14686 5537 aa2.19□□□□□ -2.06
PTPN12-209ENST00000460731 K7ERS5 55 aa2.16□□□□□ -2.06
PTPN12-209ENST00000460731 TNP1P09430 55 aa2.14□□□□□ -2.07
PTPN12-209ENST00000460731 KRTAP8-1Q8IUC2 63 aa2.14□□□□□ -2.07
PTPN12-209ENST00000460731 KRTAP25-1Q3LHN0 102 aa2.13□□□□□ -2.07
PTPN12-209ENST00000460731 KRTAP19-7Q3SYF9 63 aa2.12□□□□□ -2.07
PTPN12-209ENST00000460731 NEBP20929 6669 aa2.12□□□□□ -2.07
PTPN12-209ENST00000460731 MUC12Q9UKN1 5478 aa2.11□□□□□ -2.07
PTPN12-209ENST00000460731 MDN1Q9NU22 5596 aa2.1□□□□□ -2.07
PTPN12-209ENST00000460731 SPRR2FQ96RM1 72 aa2.09□□□□□ -2.07
PTPN12-209ENST00000460731 ROMO1P60602 79 aa2.08□□□□□ -2.08
PTPN12-209ENST00000460731 MT1EP04732 61 aa2.07□□□□□ -2.08
PTPN12-209ENST00000460731 KRTAP19-5Q3LI72 72 aa2.06□□□□□ -2.08
PTPN12-209ENST00000460731 BRK1Q8WUW1 75 aa2.06□□□□□ -2.08
PTPN12-209ENST00000460731 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
PTPN12-209ENST00000460731 SPRR2EP22531 72 aa2.02□□□□□ -2.09
PTPN12-209ENST00000460731 SPRR2BP35325 72 aa2.02□□□□□ -2.09
PTPN12-209ENST00000460731 SPRR2AP35326 72 aa2.02□□□□□ -2.09
PTPN12-209ENST00000460731 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
PTPN12-209ENST00000460731 KRTAP19-3Q7Z4W3 81 aa2.02□□□□□ -2.09
PTPN12-209ENST00000460731 MT1GP13640 62 aa2.01□□□□□ -2.09
PTPN12-209ENST00000460731 MT1LQ93083 61 aa2.01□□□□□ -2.09
PTPN12-209ENST00000460731 PRO0628Q9UI54 55 aa1.99□□□□□ -2.09
PTPN12-209ENST00000460731 PMAIP1Q13794 54 aa1.97□□□□□ -2.09
PTPN12-209ENST00000460731 KRTAP2-3P0C7H8 128 aa1.96□□□□□ -2.1
PTPN12-209ENST00000460731 KRTAP2-4Q9BYR9 128 aa1.96□□□□□ -2.1
PTPN12-209ENST00000460731 SPRR2DP22532 72 aa1.95□□□□□ -2.1
PTPN12-209ENST00000460731 MT1MQ8N339 61 aa1.95□□□□□ -2.1
PTPN12-209ENST00000460731 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
PTPN12-209ENST00000460731 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
PTPN12-209ENST00000460731 KRTAP2-1Q9BYU5 128 aa1.91□□□□□ -2.1
PTPN12-209ENST00000460731 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
PTPN12-209ENST00000460731 KTN1-AS1Q86SY8 53 aa1.84□□□□□ -2.11
PTPN12-209ENST00000460731 SPRR5A0A1B0GTR4 108 aa1.77□□□□□ -2.13
PTPN12-209ENST00000460731 MT1AP04731 61 aa1.72□□□□□ -2.13
PTPN12-209ENST00000460731 KRTAP12-4P60329 112 aa1.68□□□□□ -2.14
PTPN12-209ENST00000460731 KRTAP6-1Q3LI64 71 aa1.68□□□□□ -2.14
PTPN12-209ENST00000460731 SYNE1Q8NF91 8797 aaKnown RBP1.68□□□□□ -2.14
PTPN12-209ENST00000460731 MT4P47944 62 aa1.67□□□□□ -2.14
PTPN12-209ENST00000460731 KRTAP20-2Q3LI61 65 aa1.67□□□□□ -2.14
PTPN12-209ENST00000460731 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
PTPN12-209ENST00000460731 GPR98Q8WXG9 6306 aa1.59□□□□□ -2.16
PTPN12-209ENST00000460731 KRTAP6-2Q3LI66 62 aa1.57□□□□□ -2.16
PTPN12-209ENST00000460731 KRTAP5-10Q6L8G5 202 aa1.56□□□□□ -2.16
PTPN12-209ENST00000460731 LUZP6Q538Z0 58 aa1.52□□□□□ -2.17
PTPN12-209ENST00000460731 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
PTPN12-209ENST00000460731 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
PTPN12-209ENST00000460731 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
PTPN12-209ENST00000460731 INE1O15225 51 aa1.21□□□□□ -2.22
PTPN12-209ENST00000460731 PRM1P04553 51 aa1.05□□□□□ -2.24
PTPN12-209ENST00000460731 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
PTPN12-209ENST00000460731 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
PTPN12-209ENST00000460731 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 9.5 ms