RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 DSTQ03001 7570 aaKnown RBP6.07□□□□□ -1.44
HPS3-202ENST00000460120 LCE2DQ5TA82 110 aaPredicted RBP6.05□□□□□ -1.44
HPS3-202ENST00000460120 CRCT1Q9UGL9 99 aa6.05□□□□□ -1.44
HPS3-202ENST00000460120 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
HPS3-202ENST00000460120 MT1GP13640 62 aa6.01□□□□□ -1.45
HPS3-202ENST00000460120 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
HPS3-202ENST00000460120 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
HPS3-202ENST00000460120 MACF1Q9UPN3 7388 aaKnown RBP5.94□□□□□ -1.46
HPS3-202ENST00000460120 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
HPS3-202ENST00000460120 MT1MQ8N339 61 aa5.91□□□□□ -1.46
HPS3-202ENST00000460120 KRTAP19-3Q7Z4W3 81 aa5.9□□□□□ -1.46
HPS3-202ENST00000460120 SPRR2FQ96RM1 72 aa5.88□□□□□ -1.47
HPS3-202ENST00000460120 SYNE2Q8WXH0 6885 aaKnown RBP5.83□□□□□ -1.48
HPS3-202ENST00000460120 MDN1Q9NU22 5596 aa5.7□□□□□ -1.5
HPS3-202ENST00000460120 LCE5AQ5TCM9 118 aa5.69□□□□□ -1.5
HPS3-202ENST00000460120 SYNE1Q8NF91 8797 aaKnown RBP5.6□□□□□ -1.51
HPS3-202ENST00000460120 LCE3BQ5TA77 95 aa5.56□□□□□ -1.52
HPS3-202ENST00000460120 KRTAP9-2Q9BYQ4 174 aa5.52□□□□□ -1.53
HPS3-202ENST00000460120 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
HPS3-202ENST00000460120 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
HPS3-202ENST00000460120 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.54
HPS3-202ENST00000460120 LCE1AQ5T7P2 110 aa5.39□□□□□ -1.55
HPS3-202ENST00000460120 SPRR2EP22531 72 aa5.35□□□□□ -1.55
HPS3-202ENST00000460120 SPRR2BP35325 72 aa5.35□□□□□ -1.55
HPS3-202ENST00000460120 SPRR2AP35326 72 aa5.35□□□□□ -1.55
HPS3-202ENST00000460120 KRTAP5-9P26371 169 aa5.26□□□□□ -1.57
HPS3-202ENST00000460120 MT1AP04731 61 aa5.24□□□□□ -1.57
HPS3-202ENST00000460120 OBSCNQ5VST9 7968 aa5.22□□□□□ -1.57
HPS3-202ENST00000460120 KRTAP5-5Q701N2 237 aaPredicted RBP5.14□□□□□ -1.59
HPS3-202ENST00000460120 SPRR2DP22532 72 aa5.1□□□□□ -1.59
HPS3-202ENST00000460120 LCE3DQ9BYE3 92 aa5.1□□□□□ -1.59
HPS3-202ENST00000460120 KRTAP9-6A0A140TA67 174 aa4.99□□□□□ -1.61
HPS3-202ENST00000460120 LCE3EQ5T5B0 92 aa4.99□□□□□ -1.61
HPS3-202ENST00000460120 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.95□□□□□ -1.62
HPS3-202ENST00000460120 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
HPS3-202ENST00000460120 KRTAP9-7A8MTY7 169 aa4.94□□□□□ -1.62
HPS3-202ENST00000460120 KRTAP6-2Q3LI66 62 aa4.88□□□□□ -1.63
HPS3-202ENST00000460120 KRTAP6-3Q3LI67 103 aa4.87□□□□□ -1.63
HPS3-202ENST00000460120 PRM1P04553 51 aa4.82□□□□□ -1.64
HPS3-202ENST00000460120 MT3P25713 68 aa4.73□□□□□ -1.65
HPS3-202ENST00000460120 KRTAP2-2Q9BYT5 123 aa4.68□□□□□ -1.66
HPS3-202ENST00000460120 NEBP20929 6669 aa4.66□□□□□ -1.66
HPS3-202ENST00000460120 MT4P47944 62 aa4.61□□□□□ -1.67
HPS3-202ENST00000460120 KRTAP4-6Q9BYQ5 205 aa4.59□□□□□ -1.68
HPS3-202ENST00000460120 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
HPS3-202ENST00000460120 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
HPS3-202ENST00000460120 HMCN1Q96RW7 5635 aa4.37□□□□□ -1.71
HPS3-202ENST00000460120 KRTAP20-2Q3LI61 65 aa4.36□□□□□ -1.71
HPS3-202ENST00000460120 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
HPS3-202ENST00000460120 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
HPS3-202ENST00000460120 KRTAP5-2Q701N4 177 aa4.2□□□□□ -1.74
HPS3-202ENST00000460120 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
HPS3-202ENST00000460120 MUC5ACP98088 5654 aa4.08□□□□□ -1.76
HPS3-202ENST00000460120 KRTAP20-1Q3LI63 56 aa4.06□□□□□ -1.76
HPS3-202ENST00000460120 LCE1BQ5T7P3 118 aa4.02□□□□□ -1.77
HPS3-202ENST00000460120 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
HPS3-202ENST00000460120 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
HPS3-202ENST00000460120 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
HPS3-202ENST00000460120 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
HPS3-202ENST00000460120 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.82
HPS3-202ENST00000460120 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
HPS3-202ENST00000460120 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
HPS3-202ENST00000460120 KRTAP5-8O75690 187 aa3.44□□□□□ -1.86
HPS3-202ENST00000460120 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
HPS3-202ENST00000460120 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
HPS3-202ENST00000460120 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
HPS3-202ENST00000460120 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
HPS3-202ENST00000460120 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
HPS3-202ENST00000460120 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
HPS3-202ENST00000460120 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
HPS3-202ENST00000460120 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
HPS3-202ENST00000460120 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
HPS3-202ENST00000460120 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
HPS3-202ENST00000460120 KRTAP21-1Q3LI58 79 aa3□□□□□ -1.93
HPS3-202ENST00000460120 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
HPS3-202ENST00000460120 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
HPS3-202ENST00000460120 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 80.2 ms