RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 KRTAP2-4Q9BYR9 128 aa6.61□□□□□ -1.35
CNEP1R1-203ENST00000458059 KRTAP2-1Q9BYU5 128 aa6.61□□□□□ -1.35
CNEP1R1-203ENST00000458059 DSTQ03001 7570 aaKnown RBP6.6□□□□□ -1.35
CNEP1R1-203ENST00000458059 CRCT1Q9UGL9 99 aa6.57□□□□□ -1.36
CNEP1R1-203ENST00000458059 MT1GP13640 62 aa6.47□□□□□ -1.37
CNEP1R1-203ENST00000458059 LCE2DQ5TA82 110 aaPredicted RBP6.39□□□□□ -1.39
CNEP1R1-203ENST00000458059 KRTAP19-6Q3LI70 58 aa6.32□□□□□ -1.4
CNEP1R1-203ENST00000458059 MACF1Q9UPN3 7388 aaKnown RBP6.28□□□□□ -1.4
CNEP1R1-203ENST00000458059 SYNE1Q8NF91 8797 aaKnown RBP6.25□□□□□ -1.41
CNEP1R1-203ENST00000458059 MT1MQ8N339 61 aa6.25□□□□□ -1.41
CNEP1R1-203ENST00000458059 SYNE2Q8WXH0 6885 aaKnown RBP6.23□□□□□ -1.41
CNEP1R1-203ENST00000458059 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.41
CNEP1R1-203ENST00000458059 KRTAP19-3Q7Z4W3 81 aa6.2□□□□□ -1.42
CNEP1R1-203ENST00000458059 KRTAP9-2Q9BYQ4 174 aa6.19□□□□□ -1.42
CNEP1R1-203ENST00000458059 SPRR2FQ96RM1 72 aa6.11□□□□□ -1.43
CNEP1R1-203ENST00000458059 KRTAP12-4P60329 112 aa6.1□□□□□ -1.43
CNEP1R1-203ENST00000458059 LCE3BQ5TA77 95 aa6.07□□□□□ -1.44
CNEP1R1-203ENST00000458059 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
CNEP1R1-203ENST00000458059 OBSCNQ5VST9 7968 aa5.95□□□□□ -1.46
CNEP1R1-203ENST00000458059 MDN1Q9NU22 5596 aa5.93□□□□□ -1.46
CNEP1R1-203ENST00000458059 LCE5AQ5TCM9 118 aa5.93□□□□□ -1.46
CNEP1R1-203ENST00000458059 KRTAP6-1Q3LI64 71 aa5.79□□□□□ -1.48
CNEP1R1-203ENST00000458059 LCE3DQ9BYE3 92 aa5.58□□□□□ -1.52
CNEP1R1-203ENST00000458059 KRTAP9-7A8MTY7 169 aa5.56□□□□□ -1.52
CNEP1R1-203ENST00000458059 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
CNEP1R1-203ENST00000458059 MT1AP04731 61 aa5.54□□□□□ -1.52
CNEP1R1-203ENST00000458059 LCE1AQ5T7P2 110 aa5.52□□□□□ -1.53
CNEP1R1-203ENST00000458059 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.49□□□□□ -1.53
CNEP1R1-203ENST00000458059 LCE3EQ5T5B0 92 aa5.49□□□□□ -1.53
CNEP1R1-203ENST00000458059 SPRR2EP22531 72 aa5.46□□□□□ -1.54
CNEP1R1-203ENST00000458059 SPRR2BP35325 72 aa5.46□□□□□ -1.54
CNEP1R1-203ENST00000458059 SPRR2AP35326 72 aa5.46□□□□□ -1.54
CNEP1R1-203ENST00000458059 PRM1P04553 51 aa5.44□□□□□ -1.54
CNEP1R1-203ENST00000458059 KRTAP5-5Q701N2 237 aaPredicted RBP5.41□□□□□ -1.54
CNEP1R1-203ENST00000458059 KRTAP5-9P26371 169 aa5.37□□□□□ -1.55
CNEP1R1-203ENST00000458059 KRTAP9-4Q9BYQ2 154 aa5.22□□□□□ -1.57
CNEP1R1-203ENST00000458059 KRTAP6-2Q3LI66 62 aa5.21□□□□□ -1.58
CNEP1R1-203ENST00000458059 SPRR2DP22532 72 aa5.2□□□□□ -1.58
CNEP1R1-203ENST00000458059 KRTAP6-3Q3LI67 103 aa5.2□□□□□ -1.58
CNEP1R1-203ENST00000458059 NEBP20929 6669 aa5.11□□□□□ -1.59
CNEP1R1-203ENST00000458059 MT3P25713 68 aa4.99□□□□□ -1.61
CNEP1R1-203ENST00000458059 KRTAP2-2Q9BYT5 123 aa4.95□□□□□ -1.62
CNEP1R1-203ENST00000458059 LCE1EQ5T753 118 aa4.77□□□□□ -1.65
CNEP1R1-203ENST00000458059 MT4P47944 62 aa4.77□□□□□ -1.65
CNEP1R1-203ENST00000458059 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
CNEP1R1-203ENST00000458059 LCE1FQ5T754 118 aa4.68□□□□□ -1.66
CNEP1R1-203ENST00000458059 HMCN1Q96RW7 5635 aa4.59□□□□□ -1.67
CNEP1R1-203ENST00000458059 KRTAP5-4Q6L8H1 288 aa4.57□□□□□ -1.68
CNEP1R1-203ENST00000458059 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
CNEP1R1-203ENST00000458059 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
CNEP1R1-203ENST00000458059 KRTAP20-2Q3LI61 65 aa4.45□□□□□ -1.7
CNEP1R1-203ENST00000458059 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
CNEP1R1-203ENST00000458059 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
CNEP1R1-203ENST00000458059 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
CNEP1R1-203ENST00000458059 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
CNEP1R1-203ENST00000458059 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
CNEP1R1-203ENST00000458059 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
CNEP1R1-203ENST00000458059 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
CNEP1R1-203ENST00000458059 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
CNEP1R1-203ENST00000458059 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
CNEP1R1-203ENST00000458059 AHNAK2Q8IVF2 5795 aa3.83□□□□□ -1.8
CNEP1R1-203ENST00000458059 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
CNEP1R1-203ENST00000458059 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
CNEP1R1-203ENST00000458059 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
CNEP1R1-203ENST00000458059 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
CNEP1R1-203ENST00000458059 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
CNEP1R1-203ENST00000458059 KRTAP21-2Q3LI59 83 aa3.64□□□□□ -1.83
CNEP1R1-203ENST00000458059 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
CNEP1R1-203ENST00000458059 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
CNEP1R1-203ENST00000458059 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
CNEP1R1-203ENST00000458059 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
CNEP1R1-203ENST00000458059 KRTAP21-1Q3LI58 79 aa3.24□□□□□ -1.89
CNEP1R1-203ENST00000458059 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
CNEP1R1-203ENST00000458059 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
CNEP1R1-203ENST00000458059 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
CNEP1R1-203ENST00000458059 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
CNEP1R1-203ENST00000458059 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 147.4 ms