RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
SF3B4-202ENST00000457312 PHGR1C9JFL3 82 aa4.13□□□□□ -1.75
SF3B4-202ENST00000457312 CHKB-CPT1BH3BT56 60 aa4.13□□□□□ -1.75
SF3B4-202ENST00000457312 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
SF3B4-202ENST00000457312 C9orf118A6NHY6 69 aa4.12□□□□□ -1.75
SF3B4-202ENST00000457312 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
SF3B4-202ENST00000457312 H3BPC8 53 aa4.09□□□□□ -1.75
SF3B4-202ENST00000457312 PRO0461Q9UI25 63 aa4.06□□□□□ -1.76
SF3B4-202ENST00000457312 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
SF3B4-202ENST00000457312 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
SF3B4-202ENST00000457312 ATP5EP2Q5VTU8 51 aa4□□□□□ -1.77
SF3B4-202ENST00000457312 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
SF3B4-202ENST00000457312 SMIM6P0DI80 62 aa3.96□□□□□ -1.78
SF3B4-202ENST00000457312 SVIPQ8NHG7 77 aa3.94□□□□□ -1.78
SF3B4-202ENST00000457312 SCGB1A1P11684 91 aa3.93□□□□□ -1.78
SF3B4-202ENST00000457312 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
SF3B4-202ENST00000457312 LOC105371267A0A1B0GV96 52 aa3.88□□□□□ -1.79
SF3B4-202ENST00000457312 A0A1B0GU33 70 aa3.86□□□□□ -1.79
SF3B4-202ENST00000457312 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
SF3B4-202ENST00000457312 A8MU10 97 aa3.8□□□□□ -1.8
SF3B4-202ENST00000457312 COL5A1-AS1Q5SY13 56 aa3.79□□□□□ -1.8
SF3B4-202ENST00000457312 SERP1Q9Y6X1 66 aa3.79□□□□□ -1.8
SF3B4-202ENST00000457312 ETDBQ3ZM63 59 aa3.76□□□□□ -1.81
SF3B4-202ENST00000457312 PCP4L1A6NKN8 68 aa3.75□□□□□ -1.81
SF3B4-202ENST00000457312 SEC61GP60059 68 aa3.75□□□□□ -1.81
SF3B4-202ENST00000457312 SMIM26A0A096LP01 95 aa3.74□□□□□ -1.81
SF3B4-202ENST00000457312 GTF2H5Q6ZYL4 71 aa3.72□□□□□ -1.81
SF3B4-202ENST00000457312 F8W1H4 67 aa3.67□□□□□ -1.82
SF3B4-202ENST00000457312 FAM240AA0A1B0GVK7 77 aa3.64□□□□□ -1.83
SF3B4-202ENST00000457312 LINC00643Q86TS7 51 aa3.57□□□□□ -1.84
SF3B4-202ENST00000457312 J3QR89 54 aa3.51□□□□□ -1.85
SF3B4-202ENST00000457312 A0A1B0GV90 55 aa3.5□□□□□ -1.85
SF3B4-202ENST00000457312 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
SF3B4-202ENST00000457312 COA5Q86WW8 74 aa3.45□□□□□ -1.86
SF3B4-202ENST00000457312 SPANXA2-OT1Q8N9U9 137 aa3.44□□□□□ -1.86
SF3B4-202ENST00000457312 SERP2Q8N6R1 65 aa3.42□□□□□ -1.86
SF3B4-202ENST00000457312 K7ERU9 68 aa3.37□□□□□ -1.87
SF3B4-202ENST00000457312 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.87
SF3B4-202ENST00000457312 SNURFQ9Y675 71 aa3.32□□□□□ -1.88
SF3B4-202ENST00000457312 SMIM20Q8N5G0 67 aa3.31□□□□□ -1.88
SF3B4-202ENST00000457312 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
SF3B4-202ENST00000457312 H7BZZ5 65 aa3.29□□□□□ -1.88
SF3B4-202ENST00000457312 A0A1B0GU69 56 aa3.25□□□□□ -1.89
SF3B4-202ENST00000457312 PCP4P48539 62 aa3.23□□□□□ -1.89
SF3B4-202ENST00000457312 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
SF3B4-202ENST00000457312 PRR15LQ9BU68 103 aa3.15□□□□□ -1.91
SF3B4-202ENST00000457312 KRTAP21-1Q3LI58 79 aa3.14□□□□□ -1.91
SF3B4-202ENST00000457312 COX7CP15954 63 aa3.09□□□□□ -1.91
SF3B4-202ENST00000457312 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
SF3B4-202ENST00000457312 ANAPC13Q9BS18 74 aa3.05□□□□□ -1.92
SF3B4-202ENST00000457312 H3BS24 57 aa2.97□□□□□ -1.93
SF3B4-202ENST00000457312 CCDC179H3BU77 68 aa2.93□□□□□ -1.94
SF3B4-202ENST00000457312 ATP5EP56381 51 aaPredicted RBP2.93□□□□□ -1.94
SF3B4-202ENST00000457312 A0A0A0MQY5 61 aa2.91□□□□□ -1.94
SF3B4-202ENST00000457312 V9GYY9 64 aa2.91□□□□□ -1.94
SF3B4-202ENST00000457312 RPS28P62857 69 aaKnown RBP2.87□□□□□ -1.95
SF3B4-202ENST00000457312 TMEM258P61165 79 aa2.86□□□□□ -1.95
SF3B4-202ENST00000457312 LINC01558Q9Y6Z2 57 aa2.8□□□□□ -1.96
SF3B4-202ENST00000457312 UQCR11O14957 56 aa2.77□□□□□ -1.97
SF3B4-202ENST00000457312 K7ERS5 55 aa2.72□□□□□ -1.97
SF3B4-202ENST00000457312 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
SF3B4-202ENST00000457312 PRO0628Q9UI54 55 aa2.71□□□□□ -1.98
SF3B4-202ENST00000457312 MIR22HGQ0VDD5 57 aa2.7□□□□□ -1.98
SF3B4-202ENST00000457312 PSPHP1O15172 72 aa2.68□□□□□ -1.98
SF3B4-202ENST00000457312 Q1T7F1 81 aa2.67□□□□□ -1.98
SF3B4-202ENST00000457312 A6NED7 52 aa2.62□□□□□ -1.99
SF3B4-202ENST00000457312 PMAIP1Q13794 54 aa2.61□□□□□ -1.99
SF3B4-202ENST00000457312 CDC42SE1Q9NRR8 79 aa2.53□□□□□ -2
SF3B4-202ENST00000457312 ROMO1P60602 79 aa2.47□□□□□ -2.01
SF3B4-202ENST00000457312 BRK1Q8WUW1 75 aa2.44□□□□□ -2.02
SF3B4-202ENST00000457312 KTN1-AS1Q86SY8 53 aa2.43□□□□□ -2.02
SF3B4-202ENST00000457312 PRAC1Q96KF2 57 aa2.43□□□□□ -2.02
SF3B4-202ENST00000457312 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
SF3B4-202ENST00000457312 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
SF3B4-202ENST00000457312 LUZP6Q538Z0 58 aa2.29□□□□□ -2.04
SF3B4-202ENST00000457312 NDUFAF8A1L188 74 aa2.11□□□□□ -2.07
SF3B4-202ENST00000457312 INE1O15225 51 aa1.75□□□□□ -2.13
SF3B4-202ENST00000457312 PRM1P04553 51 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 48.3 ms