RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-204ENST00000456983 KRTAP19-8Q3LI54 63 aa2.02□□□□□ -2.09
COL21A1-204ENST00000456983 SPATA8Q6RVD6 105 aa2.02□□□□□ -2.09
COL21A1-204ENST00000456983 LINC01558Q9Y6Z2 57 aa2.02□□□□□ -2.09
COL21A1-204ENST00000456983 SMIM26A0A096LP01 95 aa2□□□□□ -2.09
COL21A1-204ENST00000456983 PSPHP1O15172 72 aa2□□□□□ -2.09
COL21A1-204ENST00000456983 PLAC4Q8WY50 150 aa1.99□□□□□ -2.09
COL21A1-204ENST00000456983 V9GYY9 64 aa1.99□□□□□ -2.09
COL21A1-204ENST00000456983 Q1T7F1 81 aa1.98□□□□□ -2.09
COL21A1-204ENST00000456983 KRTAP19-6Q3LI70 58 aa1.98□□□□□ -2.09
COL21A1-204ENST00000456983 A6NN06 94 aa1.97□□□□□ -2.09
COL21A1-204ENST00000456983 SPINT4Q6UDR6 99 aa1.97□□□□□ -2.09
COL21A1-204ENST00000456983 UQCR11O14957 56 aa1.96□□□□□ -2.1
COL21A1-204ENST00000456983 RPS28P62857 69 aaKnown RBP1.96□□□□□ -2.1
COL21A1-204ENST00000456983 FCGBPQ9Y6R7 5405 aaPredicted RBP1.95□□□□□ -2.1
COL21A1-204ENST00000456983 A6NED7 52 aa1.95□□□□□ -2.1
COL21A1-204ENST00000456983 CAMK2N1Q7Z7J9 78 aa1.95□□□□□ -2.1
COL21A1-204ENST00000456983 KRTAP12-1P59990 96 aa1.94□□□□□ -2.1
COL21A1-204ENST00000456983 MT1XP80297 61 aa1.94□□□□□ -2.1
COL21A1-204ENST00000456983 MIR22HGQ0VDD5 57 aa1.94□□□□□ -2.1
COL21A1-204ENST00000456983 PRO2289Q9P1D8 64 aa1.94□□□□□ -2.1
COL21A1-204ENST00000456983 MACF1Q9UPN3 7388 aaKnown RBP1.94□□□□□ -2.1
COL21A1-204ENST00000456983 K7ERS5 55 aa1.88□□□□□ -2.11
COL21A1-204ENST00000456983 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
COL21A1-204ENST00000456983 CDC42SE1Q9NRR8 79 aa1.86□□□□□ -2.11
COL21A1-204ENST00000456983 SYNE2Q8WXH0 6885 aaKnown RBP1.85□□□□□ -2.11
COL21A1-204ENST00000456983 BRK1Q8WUW1 75 aa1.84□□□□□ -2.11
COL21A1-204ENST00000456983 KMT2DO14686 5537 aa1.83□□□□□ -2.12
COL21A1-204ENST00000456983 C10orf95Q9H7T3 257 aa1.83□□□□□ -2.12
COL21A1-204ENST00000456983 KRTAP8-1Q8IUC2 63 aa1.82□□□□□ -2.12
COL21A1-204ENST00000456983 TNP1P09430 55 aa1.81□□□□□ -2.12
COL21A1-204ENST00000456983 SPRR2FQ96RM1 72 aa1.79□□□□□ -2.12
COL21A1-204ENST00000456983 KRTAP6-3Q3LI67 103 aa1.78□□□□□ -2.12
COL21A1-204ENST00000456983 ROMO1P60602 79 aa1.77□□□□□ -2.13
COL21A1-204ENST00000456983 KRTAP25-1Q3LHN0 102 aa1.76□□□□□ -2.13
COL21A1-204ENST00000456983 KRTAP19-5Q3LI72 72 aa1.74□□□□□ -2.13
COL21A1-204ENST00000456983 MUC12Q9UKN1 5478 aa1.73□□□□□ -2.13
COL21A1-204ENST00000456983 SPRR2EP22531 72 aa1.73□□□□□ -2.13
COL21A1-204ENST00000456983 SPRR2BP35325 72 aa1.73□□□□□ -2.13
COL21A1-204ENST00000456983 SPRR2AP35326 72 aa1.73□□□□□ -2.13
COL21A1-204ENST00000456983 KRTAP19-7Q3SYF9 63 aa1.72□□□□□ -2.13
COL21A1-204ENST00000456983 MDN1Q9NU22 5596 aa1.72□□□□□ -2.13
COL21A1-204ENST00000456983 NEBP20929 6669 aa1.72□□□□□ -2.13
COL21A1-204ENST00000456983 MT1EP04732 61 aa1.71□□□□□ -2.14
COL21A1-204ENST00000456983 PMAIP1Q13794 54 aa1.7□□□□□ -2.14
COL21A1-204ENST00000456983 KRTAP12-3P60328 96 aa1.69□□□□□ -2.14
COL21A1-204ENST00000456983 PRO0628Q9UI54 55 aa1.69□□□□□ -2.14
COL21A1-204ENST00000456983 SPRR2DP22532 72 aa1.67□□□□□ -2.14
COL21A1-204ENST00000456983 KRTAP19-3Q7Z4W3 81 aa1.67□□□□□ -2.14
COL21A1-204ENST00000456983 MT1LQ93083 61 aa1.66□□□□□ -2.14
COL21A1-204ENST00000456983 DSTQ03001 7570 aaKnown RBP1.63□□□□□ -2.15
COL21A1-204ENST00000456983 KRTAP20-1Q3LI63 56 aa1.63□□□□□ -2.15
COL21A1-204ENST00000456983 MT1MQ8N339 61 aa1.62□□□□□ -2.15
COL21A1-204ENST00000456983 MT1GP13640 62 aa1.61□□□□□ -2.15
COL21A1-204ENST00000456983 KTN1-AS1Q86SY8 53 aa1.61□□□□□ -2.15
COL21A1-204ENST00000456983 SPRR5A0A1B0GTR4 108 aa1.59□□□□□ -2.15
COL21A1-204ENST00000456983 KRTAP2-3P0C7H8 128 aa1.58□□□□□ -2.16
COL21A1-204ENST00000456983 KRTAP2-4Q9BYR9 128 aa1.58□□□□□ -2.16
COL21A1-204ENST00000456983 KRTAP2-1Q9BYU5 128 aa1.54□□□□□ -2.16
COL21A1-204ENST00000456983 GPR98Q8WXG9 6306 aa1.51□□□□□ -2.17
COL21A1-204ENST00000456983 KRTAP12-4P60329 112 aa1.48□□□□□ -2.17
COL21A1-204ENST00000456983 MT4P47944 62 aa1.46□□□□□ -2.18
COL21A1-204ENST00000456983 HMCN1Q96RW7 5635 aa1.42□□□□□ -2.18
COL21A1-204ENST00000456983 MT1AP04731 61 aa1.41□□□□□ -2.18
COL21A1-204ENST00000456983 SYNE1Q8NF91 8797 aaKnown RBP1.4□□□□□ -2.19
COL21A1-204ENST00000456983 KRTAP6-1Q3LI64 71 aa1.4□□□□□ -2.19
COL21A1-204ENST00000456983 KRTAP20-2Q3LI61 65 aa1.37□□□□□ -2.19
COL21A1-204ENST00000456983 LUZP6Q538Z0 58 aa1.35□□□□□ -2.19
COL21A1-204ENST00000456983 AHNAK2Q8IVF2 5795 aa1.32□□□□□ -2.2
COL21A1-204ENST00000456983 KRTAP6-2Q3LI66 62 aa1.32□□□□□ -2.2
COL21A1-204ENST00000456983 KRTAP5-10Q6L8G5 202 aa1.25□□□□□ -2.21
COL21A1-204ENST00000456983 MUC5ACP98088 5654 aa1.11□□□□□ -2.23
COL21A1-204ENST00000456983 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
COL21A1-204ENST00000456983 MUC5BQ9HC84 5762 aaPredicted RBP1.1□□□□□ -2.23
COL21A1-204ENST00000456983 INE1O15225 51 aa0.97□□□□□ -2.25
COL21A1-204ENST00000456983 PRM1P04553 51 aa0.93□□□□□ -2.26
COL21A1-204ENST00000456983 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
COL21A1-204ENST00000456983 PHGR1C9JFL3 82 aa0.81□□□□□ -2.28
COL21A1-204ENST00000456983 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 79.7 ms