RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-204ENST00000456983 AEBP2Q6ZN18 517 aaPredicted RBP24.32■■□□□ 1.48
COL21A1-204ENST00000456983 CHIC1Q5VXU3 224 aa23.1■■□□□ 1.29
COL21A1-204ENST00000456983 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
COL21A1-204ENST00000456983 PHF23Q9BUL5 403 aaPredicted RBP20.67■□□□□ 0.9
COL21A1-204ENST00000456983 FOXD1Q16676 465 aa19.49■□□□□ 0.71
COL21A1-204ENST00000456983 MSH5O43196 834 aa18.6■□□□□ 0.57
COL21A1-204ENST00000456983 PLPPR3Q6T4P5 718 aa18.45■□□□□ 0.54
COL21A1-204ENST00000456983 POTEDQ86YR6 584 aa18.33■□□□□ 0.52
COL21A1-204ENST00000456983 PIAS4Q8N2W9 510 aaPredicted RBP18.28■□□□□ 0.52
COL21A1-204ENST00000456983 ADRA2BP18089 450 aa17.92■□□□□ 0.46
COL21A1-204ENST00000456983 PPP6R1Q9UPN7 881 aa17.92■□□□□ 0.46
COL21A1-204ENST00000456983 SCAF1Q9H7N4 1312 aaKnown RBP16.78■□□□□ 0.28
COL21A1-204ENST00000456983 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
COL21A1-204ENST00000456983 MAPK8IP2Q13387 824 aaPredicted RBP16.48■□□□□ 0.23
COL21A1-204ENST00000456983 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
COL21A1-204ENST00000456983 PPP4R3CPQ6ZMV5 832 aa16.03■□□□□ 0.16
COL21A1-204ENST00000456983 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
COL21A1-204ENST00000456983 HOXD11P31277 338 aaPredicted RBP15.9■□□□□ 0.14
COL21A1-204ENST00000456983 CNKSR2Q8WXI2 1034 aa15.87■□□□□ 0.13
COL21A1-204ENST00000456983 RNF216Q9NWF9 866 aaPredicted RBP15.78■□□□□ 0.12
COL21A1-204ENST00000456983 RNF39Q9H2S5 420 aa15.68■□□□□ 0.1
COL21A1-204ENST00000456983 C1QBPQ07021 282 aaKnown RBP15.59■□□□□ 0.09
COL21A1-204ENST00000456983 NCBP3Q53F19 620 aaKnown RBP15.56■□□□□ 0.08
COL21A1-204ENST00000456983 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
COL21A1-204ENST00000456983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.03
COL21A1-204ENST00000456983 NPM3O75607 178 aaKnown RBP15.06■□□□□ 0
COL21A1-204ENST00000456983 U3KPZ7 1027 aaPredicted RBP14.73□□□□□ -0.05
COL21A1-204ENST00000456983 CAPN15O75808 1086 aa14.72□□□□□ -0.05
COL21A1-204ENST00000456983 APLP2Q06481 763 aa14.71□□□□□ -0.05
COL21A1-204ENST00000456983 DSG3P32926 999 aa14.59□□□□□ -0.07
COL21A1-204ENST00000456983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
COL21A1-204ENST00000456983 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
COL21A1-204ENST00000456983 SPINK5Q9NQ38 1064 aaPredicted RBP14.55□□□□□ -0.08
COL21A1-204ENST00000456983 KCNA4P22459 653 aa14.49□□□□□ -0.09
COL21A1-204ENST00000456983 ZNF219Q9P2Y4 722 aaPredicted RBP14.48□□□□□ -0.09
COL21A1-204ENST00000456983 TRHP20396 242 aaPredicted RBP14.39□□□□□ -0.11
COL21A1-204ENST00000456983 POTEHQ6S545 545 aa14.39□□□□□ -0.11
COL21A1-204ENST00000456983 SAMD1Q6SPF0 538 aaPredicted RBP14.39□□□□□ -0.11
COL21A1-204ENST00000456983 SLC4A2P04920 1241 aa14.36□□□□□ -0.11
COL21A1-204ENST00000456983 ABCB7O75027 752 aa14.23□□□□□ -0.13
COL21A1-204ENST00000456983 RBM42Q9BTD8 480 aaKnown RBP14.18□□□□□ -0.14
COL21A1-204ENST00000456983 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.16
COL21A1-204ENST00000456983 POLA2Q14181 598 aa13.93□□□□□ -0.18
COL21A1-204ENST00000456983 ZBTB12Q9Y330 459 aaPredicted RBP13.86□□□□□ -0.19
COL21A1-204ENST00000456983 CHRDL2Q6WN34 429 aa13.79□□□□□ -0.2
COL21A1-204ENST00000456983 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
COL21A1-204ENST00000456983 FOXD4L1Q9NU39 408 aa13.77□□□□□ -0.21
COL21A1-204ENST00000456983 AKT1S1Q96B36 256 aa13.7□□□□□ -0.22
COL21A1-204ENST00000456983 ATF5Q9Y2D1 282 aaPredicted RBP13.49□□□□□ -0.25
COL21A1-204ENST00000456983 ATXN8OSP0DMR3 200 aa13.46□□□□□ -0.25
COL21A1-204ENST00000456983 REM2Q8IYK8 340 aaPredicted RBP13.46□□□□□ -0.25
COL21A1-204ENST00000456983 OSCARQ8IYS5 282 aa13.44□□□□□ -0.26
COL21A1-204ENST00000456983 SP7Q8TDD2 431 aaPredicted RBP13.4□□□□□ -0.26
COL21A1-204ENST00000456983 FBLN2P98095 1184 aa13.37□□□□□ -0.27
COL21A1-204ENST00000456983 PIP4P2Q8N4L2 257 aa13.33□□□□□ -0.28
COL21A1-204ENST00000456983 SPDYE2BA6NHP3 402 aa13.3□□□□□ -0.28
COL21A1-204ENST00000456983 SPDYE6P0CI01 402 aa13.3□□□□□ -0.28
COL21A1-204ENST00000456983 SPDYE2Q495Y8 402 aa13.3□□□□□ -0.28
COL21A1-204ENST00000456983 HAX1O00165 279 aa13.28□□□□□ -0.28
COL21A1-204ENST00000456983 PITPNM1O00562 1244 aa13.28□□□□□ -0.28
COL21A1-204ENST00000456983 FXR2P51116 673 aaKnown RBP eCLIP13.26□□□□□ -0.29
COL21A1-204ENST00000456983 ZBTB22O15209 634 aa13.2□□□□□ -0.3
COL21A1-204ENST00000456983 SPDYE1Q8NFV5 336 aaPredicted RBP13.15□□□□□ -0.3
COL21A1-204ENST00000456983 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
COL21A1-204ENST00000456983 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
COL21A1-204ENST00000456983 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
COL21A1-204ENST00000456983 SSUH2Q9Y2M2 353 aa12.96□□□□□ -0.33
COL21A1-204ENST00000456983 MKRN4PQ13434 485 aaPredicted RBP12.89□□□□□ -0.35
COL21A1-204ENST00000456983 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
COL21A1-204ENST00000456983 C19orf67A6NJJ6 358 aa12.83□□□□□ -0.36
COL21A1-204ENST00000456983 EVX2Q03828 476 aa12.81□□□□□ -0.36
COL21A1-204ENST00000456983 PABPN1Q86U42 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
COL21A1-204ENST00000456983 CLCN6P51797 869 aa12.74□□□□□ -0.37
COL21A1-204ENST00000456983 GABBR2O75899 941 aa12.7□□□□□ -0.38
COL21A1-204ENST00000456983 CHADLQ6NUI6 762 aa12.7□□□□□ -0.38
COL21A1-204ENST00000456983 STAG3Q9UJ98 1225 aa12.61□□□□□ -0.39
COL21A1-204ENST00000456983 CD44P16070 742 aaKnown RBP12.6□□□□□ -0.39
COL21A1-204ENST00000456983 FARP1Q9Y4F1 1045 aaPredicted RBP12.59□□□□□ -0.39
COL21A1-204ENST00000456983 LHX8Q68G74 356 aa12.58□□□□□ -0.4
COL21A1-204ENST00000456983 CSRNP3Q8WYN3 585 aa12.48□□□□□ -0.41
COL21A1-204ENST00000456983 DCBLD2Q96PD2 775 aa12.46□□□□□ -0.41
COL21A1-204ENST00000456983 PAK3O75914 559 aaPredicted RBP12.44□□□□□ -0.42
COL21A1-204ENST00000456983 ZRANB1Q9UGI0 708 aa12.39□□□□□ -0.43
COL21A1-204ENST00000456983 ZNF579Q8NAF0 562 aaKnown RBP12.38□□□□□ -0.43
COL21A1-204ENST00000456983 SPDYE4A6NLX3 237 aa12.36□□□□□ -0.43
COL21A1-204ENST00000456983 NPM1P06748 294 aaKnown RBP eCLIP12.35□□□□□ -0.43
COL21A1-204ENST00000456983 CREBZFQ9NS37 354 aa12.31□□□□□ -0.44
COL21A1-204ENST00000456983 POTEIP0CG38 1075 aa12.28□□□□□ -0.44
COL21A1-204ENST00000456983 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
COL21A1-204ENST00000456983 GALR2O43603 387 aaPredicted RBP12.15□□□□□ -0.46
COL21A1-204ENST00000456983 PLEKHG5O94827 1062 aa12.12□□□□□ -0.47
COL21A1-204ENST00000456983 PHF12Q96QT6 1004 aa12.07□□□□□ -0.48
COL21A1-204ENST00000456983 MNX1P50219 401 aaPredicted RBP12.01□□□□□ -0.49
COL21A1-204ENST00000456983 SLC39A7Q92504 469 aa12.01□□□□□ -0.49
COL21A1-204ENST00000456983 MAMSTRQ6ZN01 415 aa12□□□□□ -0.49
COL21A1-204ENST00000456983 C7P10643 843 aa11.99□□□□□ -0.49
COL21A1-204ENST00000456983 PLSCR2Q9NRY7 297 aa11.97□□□□□ -0.49
COL21A1-204ENST00000456983 ASTLQ6HA08 431 aaPredicted RBP11.96□□□□□ -0.49
COL21A1-204ENST00000456983 OTUD5Q96G74 571 aa11.96□□□□□ -0.49
COL21A1-204ENST00000456983 METRNQ9UJH8 293 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms