RNA–Protein interactions for RNA: ENST00000452875.5

WDR6-208, Transcript of WD repeat domain 6, humanhuman

TSL 1 (best)

Gene WDR6, Length 3,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR6-208ENST00000452875 MT1LQ93083 61 aa3.83□□□□□ -1.8
WDR6-208ENST00000452875 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
WDR6-208ENST00000452875 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
WDR6-208ENST00000452875 MT1EP04732 61 aa3.8□□□□□ -1.8
WDR6-208ENST00000452875 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
WDR6-208ENST00000452875 LCE2AQ5TA79 106 aaPredicted RBP3.79□□□□□ -1.8
WDR6-208ENST00000452875 SYNE2Q8WXH0 6885 aaKnown RBP3.74□□□□□ -1.81
WDR6-208ENST00000452875 KRTAP2-3P0C7H8 128 aa3.71□□□□□ -1.82
WDR6-208ENST00000452875 KRTAP2-4Q9BYR9 128 aa3.71□□□□□ -1.82
WDR6-208ENST00000452875 KRTAP2-1Q9BYU5 128 aa3.71□□□□□ -1.82
WDR6-208ENST00000452875 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
WDR6-208ENST00000452875 KRTAP19-4Q3LI73 84 aa3.65□□□□□ -1.83
WDR6-208ENST00000452875 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
WDR6-208ENST00000452875 MT1MQ8N339 61 aa3.6□□□□□ -1.83
WDR6-208ENST00000452875 SSPOA2VEC9 5147 aa3.56□□□□□ -1.84
WDR6-208ENST00000452875 KRTAP4-9Q9BYQ8 210 aa3.54□□□□□ -1.84
WDR6-208ENST00000452875 KRTAP19-6Q3LI70 58 aa3.54□□□□□ -1.84
WDR6-208ENST00000452875 MACF1Q9UPN3 7388 aaKnown RBP3.54□□□□□ -1.84
WDR6-208ENST00000452875 SPRR2EP22531 72 aa3.53□□□□□ -1.84
WDR6-208ENST00000452875 SPRR2BP35325 72 aa3.53□□□□□ -1.84
WDR6-208ENST00000452875 SPRR2AP35326 72 aa3.53□□□□□ -1.84
WDR6-208ENST00000452875 KRTAP9-2Q9BYQ4 174 aa3.49□□□□□ -1.85
WDR6-208ENST00000452875 LCE3DQ9BYE3 92 aa3.49□□□□□ -1.85
WDR6-208ENST00000452875 LCE2DQ5TA82 110 aaPredicted RBP3.47□□□□□ -1.85
WDR6-208ENST00000452875 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.86
WDR6-208ENST00000452875 PRM1P04553 51 aa3.39□□□□□ -1.87
WDR6-208ENST00000452875 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
WDR6-208ENST00000452875 KRTAP9-6A0A140TA67 174 aa3.36□□□□□ -1.87
WDR6-208ENST00000452875 SPRR2DP22532 72 aa3.36□□□□□ -1.87
WDR6-208ENST00000452875 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
WDR6-208ENST00000452875 LCE5AQ5TCM9 118 aa3.29□□□□□ -1.88
WDR6-208ENST00000452875 KRTAP9-7A8MTY7 169 aa3.29□□□□□ -1.88
WDR6-208ENST00000452875 MT1AP04731 61 aa3.22□□□□□ -1.89
WDR6-208ENST00000452875 MT4P47944 62 aa3.21□□□□□ -1.9
WDR6-208ENST00000452875 LCE1AQ5T7P2 110 aa3.2□□□□□ -1.9
WDR6-208ENST00000452875 MDN1Q9NU22 5596 aa3.17□□□□□ -1.9
WDR6-208ENST00000452875 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.91
WDR6-208ENST00000452875 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
WDR6-208ENST00000452875 LCE1DQ5T752 114 aa3.09□□□□□ -1.92
WDR6-208ENST00000452875 MT3P25713 68 aa3.08□□□□□ -1.92
WDR6-208ENST00000452875 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
WDR6-208ENST00000452875 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
WDR6-208ENST00000452875 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
WDR6-208ENST00000452875 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.04□□□□□ -1.92
WDR6-208ENST00000452875 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
WDR6-208ENST00000452875 KRTAP9-4Q9BYQ2 154 aa3□□□□□ -1.93
WDR6-208ENST00000452875 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
WDR6-208ENST00000452875 NEBP20929 6669 aa2.77□□□□□ -1.97
WDR6-208ENST00000452875 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
WDR6-208ENST00000452875 KRTAP20-1Q3LI63 56 aa2.71□□□□□ -1.98
WDR6-208ENST00000452875 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
WDR6-208ENST00000452875 KRTAP4-11Q9BYQ6 195 aa2.6□□□□□ -1.99
WDR6-208ENST00000452875 LCE1FQ5T754 118 aa2.57□□□□□ -2
WDR6-208ENST00000452875 KRTAP20-2Q3LI61 65 aa2.53□□□□□ -2
WDR6-208ENST00000452875 HMCN1Q96RW7 5635 aa2.52□□□□□ -2.01
WDR6-208ENST00000452875 LCE4AQ5TA78 99 aa2.51□□□□□ -2.01
WDR6-208ENST00000452875 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
WDR6-208ENST00000452875 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
WDR6-208ENST00000452875 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
WDR6-208ENST00000452875 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.02
WDR6-208ENST00000452875 KRTAP4-12Q9BQ66 201 aa2.32□□□□□ -2.04
WDR6-208ENST00000452875 KRTAP4-2Q9BYR5 136 aa2.32□□□□□ -2.04
WDR6-208ENST00000452875 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
WDR6-208ENST00000452875 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
WDR6-208ENST00000452875 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
WDR6-208ENST00000452875 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
WDR6-208ENST00000452875 KRTAP9-9Q9BYP9 154 aa2.06□□□□□ -2.08
WDR6-208ENST00000452875 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
WDR6-208ENST00000452875 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
WDR6-208ENST00000452875 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
WDR6-208ENST00000452875 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
WDR6-208ENST00000452875 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
WDR6-208ENST00000452875 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.11
WDR6-208ENST00000452875 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.13
WDR6-208ENST00000452875 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
WDR6-208ENST00000452875 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
WDR6-208ENST00000452875 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
WDR6-208ENST00000452875 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms