RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
UBE3B-204ENST00000449510 MT1LQ93083 61 aa4.08□□□□□ -1.76
UBE3B-204ENST00000449510 SPRR2FQ96RM1 72 aa4.07□□□□□ -1.76
UBE3B-204ENST00000449510 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
UBE3B-204ENST00000449510 SYNE2Q8WXH0 6885 aaKnown RBP4.04□□□□□ -1.76
UBE3B-204ENST00000449510 MUC12Q9UKN1 5478 aa4.03□□□□□ -1.76
UBE3B-204ENST00000449510 MT1EP04732 61 aa4.02□□□□□ -1.77
UBE3B-204ENST00000449510 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
UBE3B-204ENST00000449510 KRTAP2-3P0C7H8 128 aa3.97□□□□□ -1.77
UBE3B-204ENST00000449510 KRTAP2-4Q9BYR9 128 aa3.97□□□□□ -1.77
UBE3B-204ENST00000449510 KRTAP2-1Q9BYU5 128 aa3.97□□□□□ -1.77
UBE3B-204ENST00000449510 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
UBE3B-204ENST00000449510 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
UBE3B-204ENST00000449510 SSPOA2VEC9 5147 aa3.81□□□□□ -1.8
UBE3B-204ENST00000449510 MT1MQ8N339 61 aa3.81□□□□□ -1.8
UBE3B-204ENST00000449510 KRTAP19-4Q3LI73 84 aa3.77□□□□□ -1.81
UBE3B-204ENST00000449510 PRM1P04553 51 aa3.77□□□□□ -1.81
UBE3B-204ENST00000449510 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
UBE3B-204ENST00000449510 LCE2AQ5TA79 106 aaPredicted RBP3.72□□□□□ -1.81
UBE3B-204ENST00000449510 KRTAP9-7A8MTY7 169 aa3.64□□□□□ -1.83
UBE3B-204ENST00000449510 LCE2DQ5TA82 110 aaPredicted RBP3.63□□□□□ -1.83
UBE3B-204ENST00000449510 MACF1Q9UPN3 7388 aaKnown RBP3.58□□□□□ -1.84
UBE3B-204ENST00000449510 SPRR2EP22531 72 aa3.57□□□□□ -1.84
UBE3B-204ENST00000449510 SPRR2BP35325 72 aa3.57□□□□□ -1.84
UBE3B-204ENST00000449510 SPRR2AP35326 72 aa3.57□□□□□ -1.84
UBE3B-204ENST00000449510 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
UBE3B-204ENST00000449510 KRTAP19-6Q3LI70 58 aa3.56□□□□□ -1.84
UBE3B-204ENST00000449510 KRTAP9-2Q9BYQ4 174 aa3.51□□□□□ -1.85
UBE3B-204ENST00000449510 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
UBE3B-204ENST00000449510 MDN1Q9NU22 5596 aa3.41□□□□□ -1.86
UBE3B-204ENST00000449510 LCE5AQ5TCM9 118 aa3.41□□□□□ -1.86
UBE3B-204ENST00000449510 MT1AP04731 61 aa3.39□□□□□ -1.87
UBE3B-204ENST00000449510 SPRR2DP22532 72 aa3.38□□□□□ -1.87
UBE3B-204ENST00000449510 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
UBE3B-204ENST00000449510 MT3P25713 68 aa3.29□□□□□ -1.88
UBE3B-204ENST00000449510 MT4P47944 62 aa3.24□□□□□ -1.89
UBE3B-204ENST00000449510 LCE1AQ5T7P2 110 aa3.2□□□□□ -1.9
UBE3B-204ENST00000449510 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
UBE3B-204ENST00000449510 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
UBE3B-204ENST00000449510 KRTAP9-4Q9BYQ2 154 aa3.16□□□□□ -1.9
UBE3B-204ENST00000449510 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
UBE3B-204ENST00000449510 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
UBE3B-204ENST00000449510 KRTAP9-6A0A140TA67 174 aa3.09□□□□□ -1.91
UBE3B-204ENST00000449510 KRTAP6-3Q3LI67 103 aa2.98□□□□□ -1.93
UBE3B-204ENST00000449510 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
UBE3B-204ENST00000449510 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.94
UBE3B-204ENST00000449510 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.88□□□□□ -1.95
UBE3B-204ENST00000449510 KRTAP4-6Q9BYQ5 205 aa2.86□□□□□ -1.95
UBE3B-204ENST00000449510 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
UBE3B-204ENST00000449510 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
UBE3B-204ENST00000449510 NEBP20929 6669 aa2.71□□□□□ -1.98
UBE3B-204ENST00000449510 HMCN1Q96RW7 5635 aa2.6□□□□□ -1.99
UBE3B-204ENST00000449510 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -2
UBE3B-204ENST00000449510 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
UBE3B-204ENST00000449510 KRTAP20-1Q3LI63 56 aa2.55□□□□□ -2
UBE3B-204ENST00000449510 LCE4AQ5TA78 99 aa2.49□□□□□ -2.01
UBE3B-204ENST00000449510 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.03
UBE3B-204ENST00000449510 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
UBE3B-204ENST00000449510 KRTAP4-2Q9BYR5 136 aa2.37□□□□□ -2.03
UBE3B-204ENST00000449510 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.03
UBE3B-204ENST00000449510 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.04
UBE3B-204ENST00000449510 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
UBE3B-204ENST00000449510 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
UBE3B-204ENST00000449510 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
UBE3B-204ENST00000449510 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
UBE3B-204ENST00000449510 KRTAP5-3Q6L8H2 238 aa2.21□□□□□ -2.06
UBE3B-204ENST00000449510 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
UBE3B-204ENST00000449510 KRTAP9-9Q9BYP9 154 aa2.05□□□□□ -2.08
UBE3B-204ENST00000449510 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
UBE3B-204ENST00000449510 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
UBE3B-204ENST00000449510 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
UBE3B-204ENST00000449510 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
UBE3B-204ENST00000449510 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.13
UBE3B-204ENST00000449510 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
UBE3B-204ENST00000449510 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
UBE3B-204ENST00000449510 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
UBE3B-204ENST00000449510 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
UBE3B-204ENST00000449510 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 87.1 ms