RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 MACF1Q9UPN3 7388 aaKnown RBP5.15□□□□□ -1.58
SF1-211ENST00000448404 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.59
SF1-211ENST00000448404 LCE2DQ5TA82 110 aaPredicted RBP5.12□□□□□ -1.59
SF1-211ENST00000448404 SYNE2Q8WXH0 6885 aaKnown RBP5.1□□□□□ -1.59
SF1-211ENST00000448404 LOC100996750A0A140TA64 210 aa5.06□□□□□ -1.6
SF1-211ENST00000448404 MDN1Q9NU22 5596 aa5□□□□□ -1.61
SF1-211ENST00000448404 CRCT1Q9UGL9 99 aa4.99□□□□□ -1.61
SF1-211ENST00000448404 MT1GP13640 62 aa4.95□□□□□ -1.62
SF1-211ENST00000448404 SPRR2FQ96RM1 72 aa4.92□□□□□ -1.62
SF1-211ENST00000448404 MT1MQ8N339 61 aa4.87□□□□□ -1.63
SF1-211ENST00000448404 KRTAP19-3Q7Z4W3 81 aa4.87□□□□□ -1.63
SF1-211ENST00000448404 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
SF1-211ENST00000448404 KRTAP9-2Q9BYQ4 174 aa4.84□□□□□ -1.63
SF1-211ENST00000448404 KRTAP2-3P0C7H8 128 aa4.83□□□□□ -1.64
SF1-211ENST00000448404 KRTAP2-4Q9BYR9 128 aa4.83□□□□□ -1.64
SF1-211ENST00000448404 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
SF1-211ENST00000448404 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
SF1-211ENST00000448404 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
SF1-211ENST00000448404 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
SF1-211ENST00000448404 LCE3BQ5TA77 95 aa4.55□□□□□ -1.68
SF1-211ENST00000448404 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
SF1-211ENST00000448404 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
SF1-211ENST00000448404 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
SF1-211ENST00000448404 SPRR2EP22531 72 aa4.48□□□□□ -1.69
SF1-211ENST00000448404 SPRR2BP35325 72 aa4.48□□□□□ -1.69
SF1-211ENST00000448404 SPRR2AP35326 72 aa4.48□□□□□ -1.69
SF1-211ENST00000448404 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
SF1-211ENST00000448404 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
SF1-211ENST00000448404 KRTAP9-6A0A140TA67 174 aa4.39□□□□□ -1.71
SF1-211ENST00000448404 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.34□□□□□ -1.72
SF1-211ENST00000448404 KRTAP6-3Q3LI67 103 aa4.29□□□□□ -1.72
SF1-211ENST00000448404 SPRR2DP22532 72 aa4.27□□□□□ -1.73
SF1-211ENST00000448404 MT1AP04731 61 aa4.26□□□□□ -1.73
SF1-211ENST00000448404 KRTAP5-5Q701N2 237 aaPredicted RBP4.26□□□□□ -1.73
SF1-211ENST00000448404 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.75
SF1-211ENST00000448404 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
SF1-211ENST00000448404 NEBP20929 6669 aa4.07□□□□□ -1.76
SF1-211ENST00000448404 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
SF1-211ENST00000448404 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
SF1-211ENST00000448404 KRTAP9-4Q9BYQ2 154 aa4.04□□□□□ -1.76
SF1-211ENST00000448404 PRM1P04553 51 aa4.02□□□□□ -1.77
SF1-211ENST00000448404 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
SF1-211ENST00000448404 MT4P47944 62 aa3.91□□□□□ -1.78
SF1-211ENST00000448404 MT3P25713 68 aa3.83□□□□□ -1.8
SF1-211ENST00000448404 HMCN1Q96RW7 5635 aa3.81□□□□□ -1.8
SF1-211ENST00000448404 KRTAP5-4Q6L8H1 288 aa3.79□□□□□ -1.8
SF1-211ENST00000448404 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
SF1-211ENST00000448404 KRTAP20-2Q3LI61 65 aa3.66□□□□□ -1.82
SF1-211ENST00000448404 KRTAP2-2Q9BYT5 123 aa3.65□□□□□ -1.82
SF1-211ENST00000448404 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
SF1-211ENST00000448404 KRTAP20-1Q3LI63 56 aa3.57□□□□□ -1.84
SF1-211ENST00000448404 KRTAP5-2Q701N4 177 aa3.5□□□□□ -1.85
SF1-211ENST00000448404 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
SF1-211ENST00000448404 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
SF1-211ENST00000448404 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
SF1-211ENST00000448404 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
SF1-211ENST00000448404 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
SF1-211ENST00000448404 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
SF1-211ENST00000448404 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
SF1-211ENST00000448404 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
SF1-211ENST00000448404 AHNAK2Q8IVF2 5795 aa3.09□□□□□ -1.92
SF1-211ENST00000448404 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
SF1-211ENST00000448404 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
SF1-211ENST00000448404 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
SF1-211ENST00000448404 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
SF1-211ENST00000448404 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
SF1-211ENST00000448404 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
SF1-211ENST00000448404 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.95
SF1-211ENST00000448404 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
SF1-211ENST00000448404 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
SF1-211ENST00000448404 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
SF1-211ENST00000448404 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
SF1-211ENST00000448404 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
SF1-211ENST00000448404 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
SF1-211ENST00000448404 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
SF1-211ENST00000448404 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
SF1-211ENST00000448404 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
SF1-211ENST00000448404 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 131.1 ms