RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 FLGP20930 4061 aaPredicted RBP1.81□□□□□ -2.12
PTPN12-208ENST00000447995 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
PTPN12-208ENST00000447995 M0R2T5 61 aa1.78□□□□□ -2.12
PTPN12-208ENST00000447995 HERC1Q15751 4861 aa1.78□□□□□ -2.12
PTPN12-208ENST00000447995 HMCN2Q8NDA2 5059 aa1.77□□□□□ -2.13
PTPN12-208ENST00000447995 TNP1P09430 55 aa1.77□□□□□ -2.13
PTPN12-208ENST00000447995 PLAC4Q8WY50 150 aa1.77□□□□□ -2.13
PTPN12-208ENST00000447995 SPRR2GQ9BYE4 73 aa1.76□□□□□ -2.13
PTPN12-208ENST00000447995 PCLOQ9Y6V0 5065 aa1.75□□□□□ -2.13
PTPN12-208ENST00000447995 MT1HP80294 61 aa1.74□□□□□ -2.13
PTPN12-208ENST00000447995 KRTAP10-10P60014 251 aa1.73□□□□□ -2.13
PTPN12-208ENST00000447995 MT2AP02795 61 aa1.71□□□□□ -2.14
PTPN12-208ENST00000447995 MT1FP04733 61 aa1.7□□□□□ -2.14
PTPN12-208ENST00000447995 RNF213Q63HN8 5207 aa1.7□□□□□ -2.14
PTPN12-208ENST00000447995 KRTAP19-8Q3LI54 63 aa1.69□□□□□ -2.14
PTPN12-208ENST00000447995 LUZP6Q538Z0 58 aa1.69□□□□□ -2.14
PTPN12-208ENST00000447995 MUC2Q02817 5179 aa1.68□□□□□ -2.14
PTPN12-208ENST00000447995 PRO2289Q9P1D8 64 aa1.65□□□□□ -2.15
PTPN12-208ENST00000447995 UBR4Q5T4S7 5183 aa1.63□□□□□ -2.15
PTPN12-208ENST00000447995 MT1BP07438 61 aa1.63□□□□□ -2.15
PTPN12-208ENST00000447995 FAT4Q6V0I7 4981 aa1.63□□□□□ -2.15
PTPN12-208ENST00000447995 MT1XP80297 61 aa1.62□□□□□ -2.15
PTPN12-208ENST00000447995 KRTAP8-1Q8IUC2 63 aa1.62□□□□□ -2.15
PTPN12-208ENST00000447995 LCE3DQ9BYE3 92 aa1.62□□□□□ -2.15
PTPN12-208ENST00000447995 SPRR5A0A1B0GTR4 108 aa1.61□□□□□ -2.15
PTPN12-208ENST00000447995 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
PTPN12-208ENST00000447995 KRTAP12-3P60328 96 aa1.57□□□□□ -2.16
PTPN12-208ENST00000447995 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
PTPN12-208ENST00000447995 KRTAP19-5Q3LI72 72 aa1.49□□□□□ -2.17
PTPN12-208ENST00000447995 KRTAP19-6Q3LI70 58 aa1.45□□□□□ -2.18
PTPN12-208ENST00000447995 USH2AO75445 5202 aa1.45□□□□□ -2.18
PTPN12-208ENST00000447995 INE1O15225 51 aa1.44□□□□□ -2.18
PTPN12-208ENST00000447995 KRTAP19-7Q3SYF9 63 aa1.43□□□□□ -2.18
PTPN12-208ENST00000447995 HMCN1Q96RW7 5635 aa1.42□□□□□ -2.18
PTPN12-208ENST00000447995 MT1EP04732 61 aa1.42□□□□□ -2.18
PTPN12-208ENST00000447995 SSPOA2VEC9 5147 aa1.42□□□□□ -2.18
PTPN12-208ENST00000447995 MT1LQ93083 61 aa1.4□□□□□ -2.19
PTPN12-208ENST00000447995 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
PTPN12-208ENST00000447995 KRTAP2-3P0C7H8 128 aa1.35□□□□□ -2.19
PTPN12-208ENST00000447995 MT1GP13640 62 aa1.35□□□□□ -2.19
PTPN12-208ENST00000447995 KRTAP2-4Q9BYR9 128 aa1.35□□□□□ -2.19
PTPN12-208ENST00000447995 KRTAP2-1Q9BYU5 128 aa1.35□□□□□ -2.19
PTPN12-208ENST00000447995 KRTAP19-3Q7Z4W3 81 aa1.34□□□□□ -2.19
PTPN12-208ENST00000447995 MT1MQ8N339 61 aa1.33□□□□□ -2.2
PTPN12-208ENST00000447995 KMT2DO14686 5537 aa1.32□□□□□ -2.2
PTPN12-208ENST00000447995 SPRR2FQ96RM1 72 aa1.3□□□□□ -2.2
PTPN12-208ENST00000447995 FCGBPQ9Y6R7 5405 aaPredicted RBP1.29□□□□□ -2.2
PTPN12-208ENST00000447995 FSIP2Q5CZC0 6907 aa1.25□□□□□ -2.21
PTPN12-208ENST00000447995 CRCT1Q9UGL9 99 aa1.24□□□□□ -2.21
PTPN12-208ENST00000447995 MUC12Q9UKN1 5478 aa1.22□□□□□ -2.21
PTPN12-208ENST00000447995 MT1AP04731 61 aa1.21□□□□□ -2.22
PTPN12-208ENST00000447995 SPRR2EP22531 72 aa1.21□□□□□ -2.22
PTPN12-208ENST00000447995 SPRR2BP35325 72 aa1.21□□□□□ -2.22
PTPN12-208ENST00000447995 SPRR2AP35326 72 aa1.21□□□□□ -2.22
PTPN12-208ENST00000447995 MACF1Q9UPN3 7388 aaKnown RBP1.18□□□□□ -2.22
PTPN12-208ENST00000447995 SPRR2DP22532 72 aa1.17□□□□□ -2.22
PTPN12-208ENST00000447995 KRTAP12-4P60329 112 aa1.17□□□□□ -2.22
PTPN12-208ENST00000447995 KRTAP6-1Q3LI64 71 aa1.17□□□□□ -2.22
PTPN12-208ENST00000447995 KRTAP6-3Q3LI67 103 aa1.17□□□□□ -2.22
PTPN12-208ENST00000447995 MDN1Q9NU22 5596 aa1.14□□□□□ -2.23
PTPN12-208ENST00000447995 DSTQ03001 7570 aaKnown RBP1.14□□□□□ -2.23
PTPN12-208ENST00000447995 SYNE2Q8WXH0 6885 aaKnown RBP1.08□□□□□ -2.24
PTPN12-208ENST00000447995 SYNE1Q8NF91 8797 aaKnown RBP1.07□□□□□ -2.24
PTPN12-208ENST00000447995 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
PTPN12-208ENST00000447995 PRM1P04553 51 aa1.03□□□□□ -2.24
PTPN12-208ENST00000447995 NEBP20929 6669 aa0.99□□□□□ -2.25
PTPN12-208ENST00000447995 MT4P47944 62 aa0.99□□□□□ -2.25
PTPN12-208ENST00000447995 KRTAP20-2Q3LI61 65 aa0.99□□□□□ -2.25
PTPN12-208ENST00000447995 KRTAP20-1Q3LI63 56 aa0.98□□□□□ -2.25
PTPN12-208ENST00000447995 MUC5ACP98088 5654 aa0.86□□□□□ -2.27
PTPN12-208ENST00000447995 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
PTPN12-208ENST00000447995 AHNAK2Q8IVF2 5795 aa0.78□□□□□ -2.29
PTPN12-208ENST00000447995 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
PTPN12-208ENST00000447995 MUC5BQ9HC84 5762 aaPredicted RBP0.71□□□□□ -2.3
PTPN12-208ENST00000447995 AHNAKQ09666 5890 aaKnown RBP0.68□□□□□ -2.3
PTPN12-208ENST00000447995 GPR98Q8WXG9 6306 aa0.67□□□□□ -2.3
PTPN12-208ENST00000447995 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
PTPN12-208ENST00000447995 PHGR1C9JFL3 82 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 16.9 ms