RNA–Protein interactions for RNA: ENST00000447368.6

UBP1-204, Transcript of upstream binding protein 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBP1, Length 3,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-204ENST00000447368 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
UBP1-204ENST00000447368 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
UBP1-204ENST00000447368 KRTAP2-1Q9BYU5 128 aa4.24□□□□□ -1.73
UBP1-204ENST00000447368 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
UBP1-204ENST00000447368 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
UBP1-204ENST00000447368 MT1GP13640 62 aa4.19□□□□□ -1.74
UBP1-204ENST00000447368 MUC12Q9UKN1 5478 aa4.18□□□□□ -1.74
UBP1-204ENST00000447368 SSPOA2VEC9 5147 aa4.17□□□□□ -1.74
UBP1-204ENST00000447368 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
UBP1-204ENST00000447368 SPRR2FQ96RM1 72 aa4.01□□□□□ -1.77
UBP1-204ENST00000447368 KRTAP19-6Q3LI70 58 aa4.01□□□□□ -1.77
UBP1-204ENST00000447368 KRTAP4-9Q9BYQ8 210 aa4.01□□□□□ -1.77
UBP1-204ENST00000447368 LCE3BQ5TA77 95 aa4□□□□□ -1.77
UBP1-204ENST00000447368 MT1MQ8N339 61 aa4□□□□□ -1.77
UBP1-204ENST00000447368 KRTAP19-3Q7Z4W3 81 aa3.99□□□□□ -1.77
UBP1-204ENST00000447368 LCE2DQ5TA82 110 aaPredicted RBP3.98□□□□□ -1.77
UBP1-204ENST00000447368 SYNE2Q8WXH0 6885 aaKnown RBP3.94□□□□□ -1.78
UBP1-204ENST00000447368 PRM1P04553 51 aa3.84□□□□□ -1.79
UBP1-204ENST00000447368 KRTAP9-7A8MTY7 169 aa3.81□□□□□ -1.8
UBP1-204ENST00000447368 MACF1Q9UPN3 7388 aaKnown RBP3.78□□□□□ -1.8
UBP1-204ENST00000447368 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
UBP1-204ENST00000447368 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
UBP1-204ENST00000447368 KRTAP9-2Q9BYQ4 174 aa3.71□□□□□ -1.82
UBP1-204ENST00000447368 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
UBP1-204ENST00000447368 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
UBP1-204ENST00000447368 MDN1Q9NU22 5596 aa3.68□□□□□ -1.82
UBP1-204ENST00000447368 KRTAP9-6A0A140TA67 174 aa3.61□□□□□ -1.83
UBP1-204ENST00000447368 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
UBP1-204ENST00000447368 SPRR2EP22531 72 aa3.58□□□□□ -1.84
UBP1-204ENST00000447368 SPRR2BP35325 72 aa3.58□□□□□ -1.84
UBP1-204ENST00000447368 SPRR2AP35326 72 aa3.58□□□□□ -1.84
UBP1-204ENST00000447368 MT1AP04731 61 aa3.57□□□□□ -1.84
UBP1-204ENST00000447368 LCE1AQ5T7P2 110 aa3.52□□□□□ -1.85
UBP1-204ENST00000447368 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
UBP1-204ENST00000447368 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
UBP1-204ENST00000447368 KRTAP6-3Q3LI67 103 aa3.48□□□□□ -1.85
UBP1-204ENST00000447368 SPRR2DP22532 72 aa3.41□□□□□ -1.86
UBP1-204ENST00000447368 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
UBP1-204ENST00000447368 KRTAP9-4Q9BYQ2 154 aa3.34□□□□□ -1.87
UBP1-204ENST00000447368 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
UBP1-204ENST00000447368 MT3P25713 68 aa3.29□□□□□ -1.88
UBP1-204ENST00000447368 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
UBP1-204ENST00000447368 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
UBP1-204ENST00000447368 MT4P47944 62 aa3.13□□□□□ -1.91
UBP1-204ENST00000447368 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.05□□□□□ -1.92
UBP1-204ENST00000447368 KRTAP4-6Q9BYQ5 205 aa3.01□□□□□ -1.93
UBP1-204ENST00000447368 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
UBP1-204ENST00000447368 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
UBP1-204ENST00000447368 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
UBP1-204ENST00000447368 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
UBP1-204ENST00000447368 NEBP20929 6669 aa2.81□□□□□ -1.96
UBP1-204ENST00000447368 HMCN1Q96RW7 5635 aa2.78□□□□□ -1.97
UBP1-204ENST00000447368 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
UBP1-204ENST00000447368 LCE4AQ5TA78 99 aa2.75□□□□□ -1.97
UBP1-204ENST00000447368 KRTAP20-1Q3LI63 56 aa2.73□□□□□ -1.97
UBP1-204ENST00000447368 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
UBP1-204ENST00000447368 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
UBP1-204ENST00000447368 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
UBP1-204ENST00000447368 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
UBP1-204ENST00000447368 KRTAP5-10Q6L8G5 202 aa2.53□□□□□ -2.01
UBP1-204ENST00000447368 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
UBP1-204ENST00000447368 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.02
UBP1-204ENST00000447368 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
UBP1-204ENST00000447368 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
UBP1-204ENST00000447368 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
UBP1-204ENST00000447368 KRTAP4-12Q9BQ66 201 aa2.28□□□□□ -2.04
UBP1-204ENST00000447368 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
UBP1-204ENST00000447368 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
UBP1-204ENST00000447368 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
UBP1-204ENST00000447368 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
UBP1-204ENST00000447368 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
UBP1-204ENST00000447368 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
UBP1-204ENST00000447368 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
UBP1-204ENST00000447368 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
UBP1-204ENST00000447368 KRTAP9-9Q9BYP9 154 aa1.94□□□□□ -2.1
UBP1-204ENST00000447368 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
UBP1-204ENST00000447368 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 67.1 ms