RNA–Protein interactions for RNA: ENST00000446204.6

VPS8-210, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 4,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-210ENST00000446204 MT1GP13640 62 aa2.69□□□□□ -1.98
VPS8-210ENST00000446204 KRTAP4-7Q9BYR0 210 aa2.69□□□□□ -1.98
VPS8-210ENST00000446204 SPRR2DP22532 72 aa2.68□□□□□ -1.98
VPS8-210ENST00000446204 RNF213Q63HN8 5207 aa2.68□□□□□ -1.98
VPS8-210ENST00000446204 MT1LQ93083 61 aa2.67□□□□□ -1.98
VPS8-210ENST00000446204 KRTAP12-4P60329 112 aa2.66□□□□□ -1.98
VPS8-210ENST00000446204 MT1EP04732 61 aa2.65□□□□□ -1.98
VPS8-210ENST00000446204 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
VPS8-210ENST00000446204 UBR4Q5T4S7 5183 aa2.64□□□□□ -1.99
VPS8-210ENST00000446204 LCE3BQ5TA77 95 aa2.63□□□□□ -1.99
VPS8-210ENST00000446204 KRTAP2-3P0C7H8 128 aa2.59□□□□□ -1.99
VPS8-210ENST00000446204 KRTAP2-4Q9BYR9 128 aa2.59□□□□□ -1.99
VPS8-210ENST00000446204 KRTAP19-3Q7Z4W3 81 aa2.59□□□□□ -1.99
VPS8-210ENST00000446204 KRTAP19-7Q3SYF9 63 aa2.59□□□□□ -2
VPS8-210ENST00000446204 DSTQ03001 7570 aaKnown RBP2.58□□□□□ -2
VPS8-210ENST00000446204 KRTAP2-1Q9BYU5 128 aa2.53□□□□□ -2
VPS8-210ENST00000446204 MT1MQ8N339 61 aa2.53□□□□□ -2.01
VPS8-210ENST00000446204 KRTAP19-6Q3LI70 58 aa2.52□□□□□ -2.01
VPS8-210ENST00000446204 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
VPS8-210ENST00000446204 LOC100996750A0A140TA64 210 aa2.51□□□□□ -2.01
VPS8-210ENST00000446204 KRTAP9-6A8MVA2 160 aa2.5□□□□□ -2.01
VPS8-210ENST00000446204 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
VPS8-210ENST00000446204 SSPOA2VEC9 5147 aa2.49□□□□□ -2.01
VPS8-210ENST00000446204 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
VPS8-210ENST00000446204 SYNE2Q8WXH0 6885 aaKnown RBP2.47□□□□□ -2.01
VPS8-210ENST00000446204 NEBP20929 6669 aa2.45□□□□□ -2.02
VPS8-210ENST00000446204 FSIP2Q5CZC0 6907 aa2.45□□□□□ -2.02
VPS8-210ENST00000446204 KRTAP2-2Q9BYT5 123 aa2.44□□□□□ -2.02
VPS8-210ENST00000446204 MT4P47944 62 aa2.41□□□□□ -2.02
VPS8-210ENST00000446204 PRM1P04553 51 aa2.33□□□□□ -2.04
VPS8-210ENST00000446204 MT1AP04731 61 aa2.33□□□□□ -2.04
VPS8-210ENST00000446204 KRTAP4-9Q9BYQ8 210 aa2.32□□□□□ -2.04
VPS8-210ENST00000446204 KMT2DO14686 5537 aa2.32□□□□□ -2.04
VPS8-210ENST00000446204 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
VPS8-210ENST00000446204 USH2AO75445 5202 aa2.31□□□□□ -2.04
VPS8-210ENST00000446204 MT3P25713 68 aa2.3□□□□□ -2.04
VPS8-210ENST00000446204 LCE5AQ5TCM9 118 aa2.28□□□□□ -2.04
VPS8-210ENST00000446204 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
VPS8-210ENST00000446204 KRTAP6-1Q3LI64 71 aa2.25□□□□□ -2.05
VPS8-210ENST00000446204 KRTAP5-9P26371 169 aa2.25□□□□□ -2.05
VPS8-210ENST00000446204 LCE1AQ5T7P2 110 aa2.25□□□□□ -2.05
VPS8-210ENST00000446204 FCGBPQ9Y6R7 5405 aaPredicted RBP2.24□□□□□ -2.05
VPS8-210ENST00000446204 LCE1DQ5T752 114 aa2.23□□□□□ -2.05
VPS8-210ENST00000446204 KRTAP9-9Q9BYP9 154 aa2.23□□□□□ -2.05
VPS8-210ENST00000446204 KRTAP9-4Q9BYQ2 154 aa2.23□□□□□ -2.05
VPS8-210ENST00000446204 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
VPS8-210ENST00000446204 LCE1EQ5T753 118 aa2.17□□□□□ -2.06
VPS8-210ENST00000446204 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
VPS8-210ENST00000446204 KRTAP6-2Q3LI66 62 aa2.14□□□□□ -2.07
VPS8-210ENST00000446204 LCE4AQ5TA78 99 aa2.13□□□□□ -2.07
VPS8-210ENST00000446204 MUC12Q9UKN1 5478 aa2.11□□□□□ -2.07
VPS8-210ENST00000446204 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
VPS8-210ENST00000446204 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
VPS8-210ENST00000446204 MDN1Q9NU22 5596 aa2.06□□□□□ -2.08
VPS8-210ENST00000446204 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
VPS8-210ENST00000446204 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
VPS8-210ENST00000446204 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
VPS8-210ENST00000446204 KRTAP5-5Q701N2 237 aaPredicted RBP1.91□□□□□ -2.1
VPS8-210ENST00000446204 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
VPS8-210ENST00000446204 KRTAP5-4Q6L8H1 288 aa1.82□□□□□ -2.12
VPS8-210ENST00000446204 KRTAP5-3Q6L8H2 238 aa1.82□□□□□ -2.12
VPS8-210ENST00000446204 KRTAP4-6Q9BYQ5 205 aa1.8□□□□□ -2.12
VPS8-210ENST00000446204 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
VPS8-210ENST00000446204 KRTAP4-11Q9BYQ6 195 aa1.73□□□□□ -2.13
VPS8-210ENST00000446204 KRTAP4-2Q9BYR5 136 aa1.69□□□□□ -2.14
VPS8-210ENST00000446204 KRTAP4-12Q9BQ66 201 aa1.68□□□□□ -2.14
VPS8-210ENST00000446204 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
VPS8-210ENST00000446204 KRTAP4-4Q9BYR3 166 aa1.51□□□□□ -2.17
VPS8-210ENST00000446204 KRTAP5-2Q701N4 177 aa1.5□□□□□ -2.17
VPS8-210ENST00000446204 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
VPS8-210ENST00000446204 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
VPS8-210ENST00000446204 KRTAP5-1Q6L8H4 278 aa1.39□□□□□ -2.19
VPS8-210ENST00000446204 KRTAP21-2Q3LI59 83 aa1.28□□□□□ -2.2
VPS8-210ENST00000446204 KRTAP5-11Q6L8G4 156 aa1.24□□□□□ -2.21
VPS8-210ENST00000446204 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.23□□□□□ -2.21
VPS8-210ENST00000446204 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
VPS8-210ENST00000446204 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 10 ms