RNA–Protein interactions for RNA: ENST00000445658.6

ERBB2-203, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-203ENST00000445658 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
ERBB2-203ENST00000445658 MACF1Q9UPN3 7388 aaKnown RBP4.31□□□□□ -1.72
ERBB2-203ENST00000445658 MT1EP04732 61 aa4.31□□□□□ -1.72
ERBB2-203ENST00000445658 SYNE1Q8NF91 8797 aaKnown RBP4.28□□□□□ -1.72
ERBB2-203ENST00000445658 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
ERBB2-203ENST00000445658 SPRR2FQ96RM1 72 aa4.27□□□□□ -1.73
ERBB2-203ENST00000445658 MT1LQ93083 61 aa4.26□□□□□ -1.73
ERBB2-203ENST00000445658 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
ERBB2-203ENST00000445658 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.73
ERBB2-203ENST00000445658 MT1GP13640 62 aa4.16□□□□□ -1.74
ERBB2-203ENST00000445658 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
ERBB2-203ENST00000445658 KRTAP9-2Q9BYQ4 174 aa4.16□□□□□ -1.74
ERBB2-203ENST00000445658 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
ERBB2-203ENST00000445658 KRTAP2-1Q9BYU5 128 aa4.16□□□□□ -1.74
ERBB2-203ENST00000445658 MDN1Q9NU22 5596 aa4.12□□□□□ -1.75
ERBB2-203ENST00000445658 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
ERBB2-203ENST00000445658 MT1MQ8N339 61 aa4.04□□□□□ -1.76
ERBB2-203ENST00000445658 KRTAP12-4P60329 112 aa4.01□□□□□ -1.77
ERBB2-203ENST00000445658 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
ERBB2-203ENST00000445658 KRTAP5-9P26371 169 aa3.96□□□□□ -1.78
ERBB2-203ENST00000445658 KRTAP4-9Q9BYQ8 210 aa3.93□□□□□ -1.78
ERBB2-203ENST00000445658 LCE3BQ5TA77 95 aa3.93□□□□□ -1.78
ERBB2-203ENST00000445658 SPRR2EP22531 72 aa3.9□□□□□ -1.78
ERBB2-203ENST00000445658 SPRR2BP35325 72 aa3.9□□□□□ -1.78
ERBB2-203ENST00000445658 SPRR2AP35326 72 aa3.9□□□□□ -1.78
ERBB2-203ENST00000445658 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
ERBB2-203ENST00000445658 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
ERBB2-203ENST00000445658 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.72□□□□□ -1.81
ERBB2-203ENST00000445658 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
ERBB2-203ENST00000445658 SPRR2DP22532 72 aa3.72□□□□□ -1.81
ERBB2-203ENST00000445658 KRTAP9-6A0A140TA67 174 aa3.68□□□□□ -1.82
ERBB2-203ENST00000445658 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
ERBB2-203ENST00000445658 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
ERBB2-203ENST00000445658 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
ERBB2-203ENST00000445658 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
ERBB2-203ENST00000445658 MT1AP04731 61 aa3.62□□□□□ -1.83
ERBB2-203ENST00000445658 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
ERBB2-203ENST00000445658 PRM1P04553 51 aa3.6□□□□□ -1.83
ERBB2-203ENST00000445658 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
ERBB2-203ENST00000445658 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
ERBB2-203ENST00000445658 MT4P47944 62 aa3.44□□□□□ -1.86
ERBB2-203ENST00000445658 KRTAP9-4Q9BYQ2 154 aa3.43□□□□□ -1.86
ERBB2-203ENST00000445658 NEBP20929 6669 aa3.43□□□□□ -1.86
ERBB2-203ENST00000445658 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
ERBB2-203ENST00000445658 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
ERBB2-203ENST00000445658 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.88
ERBB2-203ENST00000445658 MT3P25713 68 aa3.25□□□□□ -1.89
ERBB2-203ENST00000445658 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
ERBB2-203ENST00000445658 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
ERBB2-203ENST00000445658 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.91
ERBB2-203ENST00000445658 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
ERBB2-203ENST00000445658 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
ERBB2-203ENST00000445658 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
ERBB2-203ENST00000445658 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
ERBB2-203ENST00000445658 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
ERBB2-203ENST00000445658 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
ERBB2-203ENST00000445658 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
ERBB2-203ENST00000445658 KRTAP4-11Q9BYQ6 195 aa2.76□□□□□ -1.97
ERBB2-203ENST00000445658 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
ERBB2-203ENST00000445658 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
ERBB2-203ENST00000445658 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
ERBB2-203ENST00000445658 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -1.99
ERBB2-203ENST00000445658 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -2
ERBB2-203ENST00000445658 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
ERBB2-203ENST00000445658 KRTAP5-8O75690 187 aa2.55□□□□□ -2
ERBB2-203ENST00000445658 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
ERBB2-203ENST00000445658 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
ERBB2-203ENST00000445658 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
ERBB2-203ENST00000445658 KRTAP4-12Q9BQ66 201 aa2.41□□□□□ -2.02
ERBB2-203ENST00000445658 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.03
ERBB2-203ENST00000445658 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
ERBB2-203ENST00000445658 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
ERBB2-203ENST00000445658 KRTAP9-9Q9BYP9 154 aa2.23□□□□□ -2.05
ERBB2-203ENST00000445658 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
ERBB2-203ENST00000445658 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
ERBB2-203ENST00000445658 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
ERBB2-203ENST00000445658 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 63.4 ms