RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 UTRNP46939 3433 aa0.46□□□□□ -2.34
UBBP3-201ENST00000445497 USP34Q70CQ2 3546 aa0.46□□□□□ -2.34
UBBP3-201ENST00000445497 CSMD2Q7Z408 3487 aa0.45□□□□□ -2.34
UBBP3-201ENST00000445497 DNAH5Q8TE73 4624 aa0.45□□□□□ -2.34
UBBP3-201ENST00000445497 DYNC1H1Q14204 4646 aaKnown RBP0.45□□□□□ -2.34
UBBP3-201ENST00000445497 VPS13CQ709C8 3753 aa0.44□□□□□ -2.34
UBBP3-201ENST00000445497 MUC17Q685J3 4493 aa0.44□□□□□ -2.34
UBBP3-201ENST00000445497 LRP1BQ9NZR2 4599 aa0.44□□□□□ -2.34
UBBP3-201ENST00000445497 TRRAPQ9Y4A5 3859 aa0.44□□□□□ -2.34
UBBP3-201ENST00000445497 LAMA2P24043 3122 aaKnown RBP0.43□□□□□ -2.34
UBBP3-201ENST00000445497 KRTAP21-2Q3LI59 83 aa0.43□□□□□ -2.34
UBBP3-201ENST00000445497 ASPMQ8IZT6 3477 aa0.43□□□□□ -2.34
UBBP3-201ENST00000445497 MUC19Q7Z5P9 8384 aa0.43□□□□□ -2.34
UBBP3-201ENST00000445497 KRTAP4-1Q9BYQ7 146 aa0.42□□□□□ -2.34
UBBP3-201ENST00000445497 CRCT1Q9UGL9 99 aa0.42□□□□□ -2.34
UBBP3-201ENST00000445497 VCANP13611 3396 aa0.39□□□□□ -2.35
UBBP3-201ENST00000445497 PCNTO95613 3336 aa0.39□□□□□ -2.35
UBBP3-201ENST00000445497 MYO15AQ9UKN7 3530 aa0.39□□□□□ -2.35
UBBP3-201ENST00000445497 MT2AP02795 61 aa0.39□□□□□ -2.35
UBBP3-201ENST00000445497 KRTAP5-10Q6L8G5 202 aa0.39□□□□□ -2.35
UBBP3-201ENST00000445497 HMCN1Q96RW7 5635 aa0.38□□□□□ -2.35
UBBP3-201ENST00000445497 EYSQ5T1H1 3165 aa0.38□□□□□ -2.35
UBBP3-201ENST00000445497 KRTAP19-7Q3SYF9 63 aa0.38□□□□□ -2.35
UBBP3-201ENST00000445497 MT1MQ8N339 61 aa0.38□□□□□ -2.35
UBBP3-201ENST00000445497 STARD9Q9P2P6 4700 aa0.37□□□□□ -2.35
UBBP3-201ENST00000445497 MT1GP13640 62 aa0.37□□□□□ -2.35
UBBP3-201ENST00000445497 HMCN2Q8NDA2 5059 aa0.36□□□□□ -2.35
UBBP3-201ENST00000445497 LRP2P98164 4655 aa0.35□□□□□ -2.35
UBBP3-201ENST00000445497 MT1HL1P0DM35 61 aa0.35□□□□□ -2.35
UBBP3-201ENST00000445497 KMT2CQ8NEZ4 4911 aaKnown RBP0.35□□□□□ -2.35
UBBP3-201ENST00000445497 UNC80Q8N2C7 3258 aa0.35□□□□□ -2.35
UBBP3-201ENST00000445497 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
UBBP3-201ENST00000445497 KRTAP19-2Q3LHN2 52 aa0.34□□□□□ -2.36
UBBP3-201ENST00000445497 USH2AO75445 5202 aa0.33□□□□□ -2.36
UBBP3-201ENST00000445497 MT1BP07438 61 aa0.33□□□□□ -2.36
UBBP3-201ENST00000445497 WDFY3Q8IZQ1 3526 aa0.32□□□□□ -2.36
UBBP3-201ENST00000445497 BRCA2P51587 3418 aa0.32□□□□□ -2.36
UBBP3-201ENST00000445497 DNAH14Q0VDD8 3507 aa0.31□□□□□ -2.36
UBBP3-201ENST00000445497 SSPOA2VEC9 5147 aa0.31□□□□□ -2.36
UBBP3-201ENST00000445497 KRTAP6-1Q3LI64 71 aa0.31□□□□□ -2.36
UBBP3-201ENST00000445497 CENPFP49454 3210 aa0.31□□□□□ -2.36
UBBP3-201ENST00000445497 FAT4Q6V0I7 4981 aa0.3□□□□□ -2.36
UBBP3-201ENST00000445497 MT1FP04733 61 aa0.29□□□□□ -2.36
UBBP3-201ENST00000445497 PCLOQ9Y6V0 5065 aa0.29□□□□□ -2.36
UBBP3-201ENST00000445497 MUC2Q02817 5179 aa0.29□□□□□ -2.36
UBBP3-201ENST00000445497 HERC2O95714 4834 aa0.28□□□□□ -2.36
UBBP3-201ENST00000445497 CDH23Q9H251 3354 aa0.28□□□□□ -2.37
UBBP3-201ENST00000445497 MUC16Q8WXI7 14507 aa0.27□□□□□ -2.37
UBBP3-201ENST00000445497 DNHD1Q96M86 4753 aa0.27□□□□□ -2.37
UBBP3-201ENST00000445497 RYR1P21817 5038 aa0.27□□□□□ -2.37
UBBP3-201ENST00000445497 FCGBPQ9Y6R7 5405 aaPredicted RBP0.27□□□□□ -2.37
UBBP3-201ENST00000445497 KMT2DO14686 5537 aa0.27□□□□□ -2.37
UBBP3-201ENST00000445497 PHGR1C9JFL3 82 aa0.26□□□□□ -2.37
UBBP3-201ENST00000445497 MUC5ACP98088 5654 aa0.25□□□□□ -2.37
UBBP3-201ENST00000445497 HYDINQ4G0P3 5121 aa0.23□□□□□ -2.37
UBBP3-201ENST00000445497 UBR4Q5T4S7 5183 aa0.23□□□□□ -2.37
UBBP3-201ENST00000445497 BIRC6Q9NR09 4857 aa0.22□□□□□ -2.37
UBBP3-201ENST00000445497 RYR3Q15413 4870 aa0.21□□□□□ -2.38
UBBP3-201ENST00000445497 MUC12Q9UKN1 5478 aa0.18□□□□□ -2.38
UBBP3-201ENST00000445497 RNF213Q63HN8 5207 aa0.17□□□□□ -2.38
UBBP3-201ENST00000445497 AHNAKQ09666 5890 aaKnown RBP0.15□□□□□ -2.39
UBBP3-201ENST00000445497 MUC5BQ9HC84 5762 aaPredicted RBP0.15□□□□□ -2.39
UBBP3-201ENST00000445497 EPPK1P58107 5090 aaKnown RBP0.14□□□□□ -2.39
UBBP3-201ENST00000445497 AHNAK2Q8IVF2 5795 aa0.14□□□□□ -2.39
UBBP3-201ENST00000445497 MT4P47944 62 aa0.13□□□□□ -2.39
UBBP3-201ENST00000445497 KIAA1109Q2LD37 5005 aa0.11□□□□□ -2.39
UBBP3-201ENST00000445497 RYR2Q92736 4967 aa0.1□□□□□ -2.39
UBBP3-201ENST00000445497 GPR98Q8WXG9 6306 aa0.09□□□□□ -2.4
UBBP3-201ENST00000445497 ABCA13Q86UQ4 5058 aa0.08□□□□□ -2.4
UBBP3-201ENST00000445497 FSIP2Q5CZC0 6907 aa0.06□□□□□ -2.4
UBBP3-201ENST00000445497 DSTQ03001 7570 aaKnown RBP0.06□□□□□ -2.4
UBBP3-201ENST00000445497 KRTAP20-2Q3LI61 65 aa0.06□□□□□ -2.4
UBBP3-201ENST00000445497 SYNE2Q8WXH0 6885 aaKnown RBP0.04□□□□□ -2.4
UBBP3-201ENST00000445497 KRTAP19-6Q3LI70 58 aa0.01□□□□□ -2.41
UBBP3-201ENST00000445497 KRTAP20-1Q3LI63 56 aa-0.07□□□□□ -2.42
UBBP3-201ENST00000445497 NEBP20929 6669 aa-0.08□□□□□ -2.42
UBBP3-201ENST00000445497 MACF1Q9UPN3 7388 aaKnown RBP-0.1□□□□□ -2.43
Retrieved 77 of 20,778 RNA–protein pairs in 106 ms