RNA–Protein interactions for RNA: ENST00000441090.6

LRCH3-207, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2 BASIC

Gene LRCH3, Length 2,034 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-207ENST00000441090 KRTAP2-4Q9BYR9 128 aa6.3□□□□□ -1.4
LRCH3-207ENST00000441090 KRTAP2-1Q9BYU5 128 aa6.3□□□□□ -1.4
LRCH3-207ENST00000441090 KRTAP19-3Q7Z4W3 81 aa6.24□□□□□ -1.41
LRCH3-207ENST00000441090 MT1GP13640 62 aa6.21□□□□□ -1.42
LRCH3-207ENST00000441090 MUC12Q9UKN1 5478 aa6.21□□□□□ -1.42
LRCH3-207ENST00000441090 MT1MQ8N339 61 aa6.2□□□□□ -1.42
LRCH3-207ENST00000441090 KRTAP4-3Q9BYR4 195 aa6.18□□□□□ -1.42
LRCH3-207ENST00000441090 LOC100996750A0A140TA64 210 aa6.11□□□□□ -1.43
LRCH3-207ENST00000441090 SPRR2FQ96RM1 72 aa6.07□□□□□ -1.44
LRCH3-207ENST00000441090 LCE5AQ5TCM9 118 aa6.06□□□□□ -1.44
LRCH3-207ENST00000441090 MACF1Q9UPN3 7388 aaKnown RBP6.02□□□□□ -1.45
LRCH3-207ENST00000441090 KRTAP9-2Q9BYQ4 174 aa5.96□□□□□ -1.45
LRCH3-207ENST00000441090 CRCT1Q9UGL9 99 aa5.91□□□□□ -1.46
LRCH3-207ENST00000441090 DSTQ03001 7570 aaKnown RBP5.86□□□□□ -1.47
LRCH3-207ENST00000441090 SYNE2Q8WXH0 6885 aaKnown RBP5.82□□□□□ -1.48
LRCH3-207ENST00000441090 KRTAP5-9P26371 169 aa5.77□□□□□ -1.49
LRCH3-207ENST00000441090 MDN1Q9NU22 5596 aa5.73□□□□□ -1.49
LRCH3-207ENST00000441090 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
LRCH3-207ENST00000441090 SPRR2EP22531 72 aa5.58□□□□□ -1.52
LRCH3-207ENST00000441090 SPRR2BP35325 72 aa5.58□□□□□ -1.52
LRCH3-207ENST00000441090 SPRR2AP35326 72 aa5.58□□□□□ -1.52
LRCH3-207ENST00000441090 LCE3BQ5TA77 95 aa5.57□□□□□ -1.52
LRCH3-207ENST00000441090 KRTAP6-1Q3LI64 71 aa5.57□□□□□ -1.52
LRCH3-207ENST00000441090 MT1AP04731 61 aa5.56□□□□□ -1.52
LRCH3-207ENST00000441090 KRTAP5-5Q701N2 237 aaPredicted RBP5.53□□□□□ -1.52
LRCH3-207ENST00000441090 KRTAP9-6A0A140TA67 174 aa5.48□□□□□ -1.53
LRCH3-207ENST00000441090 KRTAP12-4P60329 112 aa5.48□□□□□ -1.53
LRCH3-207ENST00000441090 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.55
LRCH3-207ENST00000441090 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
LRCH3-207ENST00000441090 KRTAP6-3Q3LI67 103 aa5.36□□□□□ -1.55
LRCH3-207ENST00000441090 SPRR2DP22532 72 aa5.35□□□□□ -1.55
LRCH3-207ENST00000441090 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
LRCH3-207ENST00000441090 LCE3DQ9BYE3 92 aa5.24□□□□□ -1.57
LRCH3-207ENST00000441090 KRTAP9-4Q9BYQ2 154 aa5.24□□□□□ -1.57
LRCH3-207ENST00000441090 LCE3EQ5T5B0 92 aa5.16□□□□□ -1.58
LRCH3-207ENST00000441090 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
LRCH3-207ENST00000441090 KRTAP6-2Q3LI66 62 aa5.02□□□□□ -1.61
LRCH3-207ENST00000441090 MT3P25713 68 aa5□□□□□ -1.61
LRCH3-207ENST00000441090 NEBP20929 6669 aa4.98□□□□□ -1.61
LRCH3-207ENST00000441090 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
LRCH3-207ENST00000441090 PRM1P04553 51 aa4.82□□□□□ -1.64
LRCH3-207ENST00000441090 KRTAP4-6Q9BYQ5 205 aa4.72□□□□□ -1.65
LRCH3-207ENST00000441090 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
LRCH3-207ENST00000441090 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
LRCH3-207ENST00000441090 MT4P47944 62 aa4.68□□□□□ -1.66
LRCH3-207ENST00000441090 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
LRCH3-207ENST00000441090 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
LRCH3-207ENST00000441090 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
LRCH3-207ENST00000441090 HMCN1Q96RW7 5635 aa4.5□□□□□ -1.69
LRCH3-207ENST00000441090 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
LRCH3-207ENST00000441090 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
LRCH3-207ENST00000441090 KRTAP5-3Q6L8H2 238 aa4.45□□□□□ -1.7
LRCH3-207ENST00000441090 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
LRCH3-207ENST00000441090 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
LRCH3-207ENST00000441090 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
LRCH3-207ENST00000441090 KRTAP5-10Q6L8G5 202 aa3.96□□□□□ -1.78
LRCH3-207ENST00000441090 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
LRCH3-207ENST00000441090 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
LRCH3-207ENST00000441090 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
LRCH3-207ENST00000441090 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
LRCH3-207ENST00000441090 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.79
LRCH3-207ENST00000441090 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
LRCH3-207ENST00000441090 AHNAK2Q8IVF2 5795 aa3.76□□□□□ -1.81
LRCH3-207ENST00000441090 KRTAP5-8O75690 187 aa3.71□□□□□ -1.81
LRCH3-207ENST00000441090 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.81
LRCH3-207ENST00000441090 KRTAP5-7Q6L8G8 165 aa3.68□□□□□ -1.82
LRCH3-207ENST00000441090 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
LRCH3-207ENST00000441090 GPR98Q8WXG9 6306 aa3.44□□□□□ -1.86
LRCH3-207ENST00000441090 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
LRCH3-207ENST00000441090 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
LRCH3-207ENST00000441090 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
LRCH3-207ENST00000441090 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
LRCH3-207ENST00000441090 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
LRCH3-207ENST00000441090 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
LRCH3-207ENST00000441090 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
LRCH3-207ENST00000441090 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
LRCH3-207ENST00000441090 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 9 ms