RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
SHPRH-206ENST00000438092 KRTAP19-2Q3LHN2 52 aa3.14□□□□□ -1.91
SHPRH-206ENST00000438092 KMT2CQ8NEZ4 4911 aaKnown RBP3.13□□□□□ -1.91
SHPRH-206ENST00000438092 KRTAP19-6Q3LI70 58 aa3.12□□□□□ -1.91
SHPRH-206ENST00000438092 KRTAP4-9Q9BYQ8 210 aa3.12□□□□□ -1.91
SHPRH-206ENST00000438092 FSIP2Q5CZC0 6907 aa3.12□□□□□ -1.91
SHPRH-206ENST00000438092 KRTAP9-7A8MTY7 169 aa3.11□□□□□ -1.91
SHPRH-206ENST00000438092 LCE5AQ5TCM9 118 aa3.1□□□□□ -1.91
SHPRH-206ENST00000438092 PCLOQ9Y6V0 5065 aa3.08□□□□□ -1.92
SHPRH-206ENST00000438092 HERC1Q15751 4861 aa3.05□□□□□ -1.92
SHPRH-206ENST00000438092 MUC17Q685J3 4493 aa3.05□□□□□ -1.92
SHPRH-206ENST00000438092 BIRC6Q9NR09 4857 aa3□□□□□ -1.93
SHPRH-206ENST00000438092 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
SHPRH-206ENST00000438092 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
SHPRH-206ENST00000438092 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
SHPRH-206ENST00000438092 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
SHPRH-206ENST00000438092 KRTAP19-7Q3SYF9 63 aa2.93□□□□□ -1.94
SHPRH-206ENST00000438092 KRTAP2-3P0C7H8 128 aa2.92□□□□□ -1.94
SHPRH-206ENST00000438092 KRTAP2-4Q9BYR9 128 aa2.92□□□□□ -1.94
SHPRH-206ENST00000438092 KRTAP2-1Q9BYU5 128 aa2.92□□□□□ -1.94
SHPRH-206ENST00000438092 LCE2AQ5TA79 106 aaPredicted RBP2.91□□□□□ -1.94
SHPRH-206ENST00000438092 HMCN2Q8NDA2 5059 aa2.91□□□□□ -1.94
SHPRH-206ENST00000438092 MT1AP04731 61 aa2.9□□□□□ -1.94
SHPRH-206ENST00000438092 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
SHPRH-206ENST00000438092 EPPK1P58107 5090 aaKnown RBP2.87□□□□□ -1.95
SHPRH-206ENST00000438092 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.95
SHPRH-206ENST00000438092 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
SHPRH-206ENST00000438092 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.8□□□□□ -1.96
SHPRH-206ENST00000438092 MUC2Q02817 5179 aa2.79□□□□□ -1.96
SHPRH-206ENST00000438092 FAT4Q6V0I7 4981 aa2.79□□□□□ -1.96
SHPRH-206ENST00000438092 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
SHPRH-206ENST00000438092 KRTAP9-4Q9BYQ2 154 aa2.74□□□□□ -1.97
SHPRH-206ENST00000438092 ABCA13Q86UQ4 5058 aa2.72□□□□□ -1.97
SHPRH-206ENST00000438092 UBR4Q5T4S7 5183 aa2.71□□□□□ -1.97
SHPRH-206ENST00000438092 KRTAP2-2Q9BYT5 123 aa2.71□□□□□ -1.98
SHPRH-206ENST00000438092 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
SHPRH-206ENST00000438092 LCE4AQ5TA78 99 aa2.69□□□□□ -1.98
SHPRH-206ENST00000438092 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
SHPRH-206ENST00000438092 RNF213Q63HN8 5207 aa2.64□□□□□ -1.99
SHPRH-206ENST00000438092 KRTAP9-9Q9BYP9 154 aa2.57□□□□□ -2
SHPRH-206ENST00000438092 KMT2DO14686 5537 aa2.51□□□□□ -2.01
SHPRH-206ENST00000438092 KRTAP4-6Q9BYQ5 205 aa2.49□□□□□ -2.01
SHPRH-206ENST00000438092 DSTQ03001 7570 aaKnown RBP2.47□□□□□ -2.01
SHPRH-206ENST00000438092 FCGBPQ9Y6R7 5405 aaPredicted RBP2.46□□□□□ -2.02
SHPRH-206ENST00000438092 KRTAP20-2Q3LI61 65 aa2.43□□□□□ -2.02
SHPRH-206ENST00000438092 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
SHPRH-206ENST00000438092 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
SHPRH-206ENST00000438092 KRTAP4-11Q9BYQ6 195 aa2.42□□□□□ -2.02
SHPRH-206ENST00000438092 MACF1Q9UPN3 7388 aaKnown RBP2.42□□□□□ -2.02
SHPRH-206ENST00000438092 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
SHPRH-206ENST00000438092 USH2AO75445 5202 aa2.32□□□□□ -2.04
SHPRH-206ENST00000438092 NEBP20929 6669 aa2.21□□□□□ -2.06
SHPRH-206ENST00000438092 SSPOA2VEC9 5147 aa2.21□□□□□ -2.06
SHPRH-206ENST00000438092 KRTAP5-9P26371 169 aa2.2□□□□□ -2.06
SHPRH-206ENST00000438092 MUC12Q9UKN1 5478 aa2.12□□□□□ -2.07
SHPRH-206ENST00000438092 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
SHPRH-206ENST00000438092 KRTAP5-4Q6L8H1 288 aa2.04□□□□□ -2.08
SHPRH-206ENST00000438092 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
SHPRH-206ENST00000438092 KRTAP5-5Q701N2 237 aaPredicted RBP1.95□□□□□ -2.1
SHPRH-206ENST00000438092 MDN1Q9NU22 5596 aa1.94□□□□□ -2.1
SHPRH-206ENST00000438092 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
SHPRH-206ENST00000438092 KRTAP5-3Q6L8H2 238 aa1.84□□□□□ -2.11
SHPRH-206ENST00000438092 MUC5ACP98088 5654 aa1.77□□□□□ -2.13
SHPRH-206ENST00000438092 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
SHPRH-206ENST00000438092 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
SHPRH-206ENST00000438092 AHNAK2Q8IVF2 5795 aa1.58□□□□□ -2.16
SHPRH-206ENST00000438092 KRTAP5-10Q6L8G5 202 aa1.54□□□□□ -2.16
SHPRH-206ENST00000438092 KRTAP5-2Q701N4 177 aa1.51□□□□□ -2.17
SHPRH-206ENST00000438092 KRTAP5-1Q6L8H4 278 aa1.44□□□□□ -2.18
SHPRH-206ENST00000438092 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
SHPRH-206ENST00000438092 KRTAP5-11Q6L8G4 156 aa1.34□□□□□ -2.2
SHPRH-206ENST00000438092 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
SHPRH-206ENST00000438092 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
SHPRH-206ENST00000438092 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.18□□□□□ -2.22
SHPRH-206ENST00000438092 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
SHPRH-206ENST00000438092 KRTAP5-7Q6L8G8 165 aa1.06□□□□□ -2.24
SHPRH-206ENST00000438092 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 8.4 ms