RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 KRTAP19-7Q3SYF9 63 aa3.85□□□□□ -1.79
PDLIM5-206ENST00000437932 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
PDLIM5-206ENST00000437932 KRTAP19-3Q7Z4W3 81 aa3.73□□□□□ -1.81
PDLIM5-206ENST00000437932 SPRR2EP22531 72 aa3.72□□□□□ -1.81
PDLIM5-206ENST00000437932 SPRR2BP35325 72 aa3.72□□□□□ -1.81
PDLIM5-206ENST00000437932 SPRR2AP35326 72 aa3.72□□□□□ -1.81
PDLIM5-206ENST00000437932 SYNE2Q8WXH0 6885 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-206ENST00000437932 MT1MQ8N339 61 aa3.7□□□□□ -1.82
PDLIM5-206ENST00000437932 KRTAP19-6Q3LI70 58 aa3.67□□□□□ -1.82
PDLIM5-206ENST00000437932 KRTAP4-9Q9BYQ8 210 aa3.67□□□□□ -1.82
PDLIM5-206ENST00000437932 KRTAP2-3P0C7H8 128 aa3.62□□□□□ -1.83
PDLIM5-206ENST00000437932 KRTAP2-4Q9BYR9 128 aa3.62□□□□□ -1.83
PDLIM5-206ENST00000437932 KRTAP2-1Q9BYU5 128 aa3.62□□□□□ -1.83
PDLIM5-206ENST00000437932 KRTAP19-4Q3LI73 84 aa3.6□□□□□ -1.83
PDLIM5-206ENST00000437932 SPRR2DP22532 72 aa3.55□□□□□ -1.84
PDLIM5-206ENST00000437932 KRTAP9-2Q9BYQ4 174 aa3.54□□□□□ -1.84
PDLIM5-206ENST00000437932 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
PDLIM5-206ENST00000437932 SSPOA2VEC9 5147 aa3.51□□□□□ -1.85
PDLIM5-206ENST00000437932 MUC12Q9UKN1 5478 aa3.5□□□□□ -1.85
PDLIM5-206ENST00000437932 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
PDLIM5-206ENST00000437932 DSTQ03001 7570 aaKnown RBP3.49□□□□□ -1.85
PDLIM5-206ENST00000437932 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
PDLIM5-206ENST00000437932 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
PDLIM5-206ENST00000437932 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
PDLIM5-206ENST00000437932 PRM1P04553 51 aa3.4□□□□□ -1.87
PDLIM5-206ENST00000437932 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
PDLIM5-206ENST00000437932 MT4P47944 62 aa3.3□□□□□ -1.88
PDLIM5-206ENST00000437932 KRTAP9-7A8MTY7 169 aa3.28□□□□□ -1.88
PDLIM5-206ENST00000437932 MT1AP04731 61 aa3.28□□□□□ -1.88
PDLIM5-206ENST00000437932 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
PDLIM5-206ENST00000437932 LCE1AQ5T7P2 110 aa3.23□□□□□ -1.89
PDLIM5-206ENST00000437932 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
PDLIM5-206ENST00000437932 KRTAP9-6A0A140TA67 174 aa3.18□□□□□ -1.9
PDLIM5-206ENST00000437932 MT3P25713 68 aa3.16□□□□□ -1.9
PDLIM5-206ENST00000437932 KRTAP9-4Q9BYQ2 154 aa3.12□□□□□ -1.91
PDLIM5-206ENST00000437932 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.07□□□□□ -1.92
PDLIM5-206ENST00000437932 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
PDLIM5-206ENST00000437932 MDN1Q9NU22 5596 aa3.05□□□□□ -1.92
PDLIM5-206ENST00000437932 LCE1DQ5T752 114 aa3.04□□□□□ -1.92
PDLIM5-206ENST00000437932 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
PDLIM5-206ENST00000437932 KRTAP6-3Q3LI67 103 aa2.93□□□□□ -1.94
PDLIM5-206ENST00000437932 LCE4AQ5TA78 99 aa2.92□□□□□ -1.94
PDLIM5-206ENST00000437932 KRTAP5-9P26371 169 aa2.9□□□□□ -1.94
PDLIM5-206ENST00000437932 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.94
PDLIM5-206ENST00000437932 KRTAP4-6Q9BYQ5 205 aa2.86□□□□□ -1.95
PDLIM5-206ENST00000437932 NEBP20929 6669 aa2.82□□□□□ -1.96
PDLIM5-206ENST00000437932 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
PDLIM5-206ENST00000437932 KRTAP2-2Q9BYT5 123 aa2.72□□□□□ -1.97
PDLIM5-206ENST00000437932 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
PDLIM5-206ENST00000437932 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
PDLIM5-206ENST00000437932 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
PDLIM5-206ENST00000437932 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
PDLIM5-206ENST00000437932 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
PDLIM5-206ENST00000437932 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
PDLIM5-206ENST00000437932 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.03
PDLIM5-206ENST00000437932 KRTAP4-12Q9BQ66 201 aa2.32□□□□□ -2.04
PDLIM5-206ENST00000437932 KRTAP4-2Q9BYR5 136 aa2.32□□□□□ -2.04
PDLIM5-206ENST00000437932 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
PDLIM5-206ENST00000437932 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
PDLIM5-206ENST00000437932 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
PDLIM5-206ENST00000437932 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
PDLIM5-206ENST00000437932 KRTAP5-3Q6L8H2 238 aa2.21□□□□□ -2.06
PDLIM5-206ENST00000437932 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
PDLIM5-206ENST00000437932 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
PDLIM5-206ENST00000437932 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
PDLIM5-206ENST00000437932 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
PDLIM5-206ENST00000437932 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
PDLIM5-206ENST00000437932 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
PDLIM5-206ENST00000437932 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
PDLIM5-206ENST00000437932 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
PDLIM5-206ENST00000437932 GPR98Q8WXG9 6306 aa1.73□□□□□ -2.13
PDLIM5-206ENST00000437932 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.13
PDLIM5-206ENST00000437932 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
PDLIM5-206ENST00000437932 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
PDLIM5-206ENST00000437932 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
PDLIM5-206ENST00000437932 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
PDLIM5-206ENST00000437932 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms