RNA–Protein interactions for RNA: ENST00000437768.1

CASC6-201, Transcript of cancer susceptibility 6, humanhuman

TSL 1 (best) BASIC

Gene CASC6, Length 733 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC6-201ENST00000437768 KRTAP19-8Q3LI54 63 aa3.03□□□□□ -1.92
CASC6-201ENST00000437768 ABCA13Q86UQ4 5058 aa3.03□□□□□ -1.92
CASC6-201ENST00000437768 EPPK1P58107 5090 aaKnown RBP3.01□□□□□ -1.93
CASC6-201ENST00000437768 MT2AP02795 61 aa3□□□□□ -1.93
CASC6-201ENST00000437768 KRTAP8-1Q8IUC2 63 aa3□□□□□ -1.93
CASC6-201ENST00000437768 MT1FP04733 61 aa2.97□□□□□ -1.93
CASC6-201ENST00000437768 BIRC6Q9NR09 4857 aa2.95□□□□□ -1.94
CASC6-201ENST00000437768 PRO2289Q9P1D8 64 aa2.95□□□□□ -1.94
CASC6-201ENST00000437768 FLGP20930 4061 aaPredicted RBP2.93□□□□□ -1.94
CASC6-201ENST00000437768 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
CASC6-201ENST00000437768 HERC1Q15751 4861 aa2.91□□□□□ -1.94
CASC6-201ENST00000437768 MT1BP07438 61 aa2.91□□□□□ -1.94
CASC6-201ENST00000437768 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
CASC6-201ENST00000437768 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
CASC6-201ENST00000437768 KRTAP12-3P60328 96 aa2.9□□□□□ -1.95
CASC6-201ENST00000437768 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
CASC6-201ENST00000437768 MT1XP80297 61 aa2.89□□□□□ -1.95
CASC6-201ENST00000437768 HERC2O95714 4834 aa2.88□□□□□ -1.95
CASC6-201ENST00000437768 INE1O15225 51 aa2.88□□□□□ -1.95
CASC6-201ENST00000437768 HMCN2Q8NDA2 5059 aa2.77□□□□□ -1.97
CASC6-201ENST00000437768 MUC2Q02817 5179 aa2.76□□□□□ -1.97
CASC6-201ENST00000437768 PCLOQ9Y6V0 5065 aa2.74□□□□□ -1.97
CASC6-201ENST00000437768 KRTAP19-5Q3LI72 72 aa2.72□□□□□ -1.97
CASC6-201ENST00000437768 RNF213Q63HN8 5207 aa2.66□□□□□ -1.98
CASC6-201ENST00000437768 FAT4Q6V0I7 4981 aa2.61□□□□□ -1.99
CASC6-201ENST00000437768 UBR4Q5T4S7 5183 aa2.57□□□□□ -2
CASC6-201ENST00000437768 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
CASC6-201ENST00000437768 KRTAP2-3P0C7H8 128 aa2.56□□□□□ -2
CASC6-201ENST00000437768 KRTAP2-4Q9BYR9 128 aa2.56□□□□□ -2
CASC6-201ENST00000437768 KRTAP2-1Q9BYU5 128 aa2.56□□□□□ -2
CASC6-201ENST00000437768 MT1LQ93083 61 aa2.53□□□□□ -2
CASC6-201ENST00000437768 MT1EP04732 61 aa2.52□□□□□ -2.01
CASC6-201ENST00000437768 KRTAP19-6Q3LI70 58 aa2.49□□□□□ -2.01
CASC6-201ENST00000437768 MT1GP13640 62 aa2.42□□□□□ -2.02
CASC6-201ENST00000437768 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
CASC6-201ENST00000437768 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.03
CASC6-201ENST00000437768 KRTAP19-3Q7Z4W3 81 aa2.38□□□□□ -2.03
CASC6-201ENST00000437768 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
CASC6-201ENST00000437768 MT1MQ8N339 61 aa2.36□□□□□ -2.03
CASC6-201ENST00000437768 USH2AO75445 5202 aa2.32□□□□□ -2.04
CASC6-201ENST00000437768 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
CASC6-201ENST00000437768 MT1AP04731 61 aa2.24□□□□□ -2.05
CASC6-201ENST00000437768 SPRR2FQ96RM1 72 aa2.23□□□□□ -2.05
CASC6-201ENST00000437768 SSPOA2VEC9 5147 aa2.21□□□□□ -2.05
CASC6-201ENST00000437768 CRCT1Q9UGL9 99 aa2.21□□□□□ -2.06
CASC6-201ENST00000437768 KMT2DO14686 5537 aa2.19□□□□□ -2.06
CASC6-201ENST00000437768 KRTAP6-1Q3LI64 71 aa2.1□□□□□ -2.07
CASC6-201ENST00000437768 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
CASC6-201ENST00000437768 SPRR2EP22531 72 aa2.04□□□□□ -2.08
CASC6-201ENST00000437768 SPRR2BP35325 72 aa2.04□□□□□ -2.08
CASC6-201ENST00000437768 SPRR2AP35326 72 aa2.04□□□□□ -2.08
CASC6-201ENST00000437768 FCGBPQ9Y6R7 5405 aaPredicted RBP2.04□□□□□ -2.08
CASC6-201ENST00000437768 PRM1P04553 51 aa1.96□□□□□ -2.1
CASC6-201ENST00000437768 SPRR2DP22532 72 aa1.96□□□□□ -2.1
CASC6-201ENST00000437768 MUC12Q9UKN1 5478 aa1.93□□□□□ -2.1
CASC6-201ENST00000437768 KRTAP6-3Q3LI67 103 aa1.93□□□□□ -2.1
CASC6-201ENST00000437768 KRTAP6-2Q3LI66 62 aa1.9□□□□□ -2.11
CASC6-201ENST00000437768 FSIP2Q5CZC0 6907 aa1.87□□□□□ -2.11
CASC6-201ENST00000437768 SYNE1Q8NF91 8797 aaKnown RBP1.83□□□□□ -2.12
CASC6-201ENST00000437768 MACF1Q9UPN3 7388 aaKnown RBP1.8□□□□□ -2.12
CASC6-201ENST00000437768 DSTQ03001 7570 aaKnown RBP1.79□□□□□ -2.12
CASC6-201ENST00000437768 KRTAP20-2Q3LI61 65 aa1.7□□□□□ -2.14
CASC6-201ENST00000437768 MDN1Q9NU22 5596 aa1.69□□□□□ -2.14
CASC6-201ENST00000437768 MT4P47944 62 aa1.67□□□□□ -2.14
CASC6-201ENST00000437768 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
CASC6-201ENST00000437768 SYNE2Q8WXH0 6885 aaKnown RBP1.66□□□□□ -2.14
CASC6-201ENST00000437768 KRTAP20-1Q3LI63 56 aa1.65□□□□□ -2.15
CASC6-201ENST00000437768 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
CASC6-201ENST00000437768 KRTAP5-10Q6L8G5 202 aa1.5□□□□□ -2.17
CASC6-201ENST00000437768 NEBP20929 6669 aa1.48□□□□□ -2.17
CASC6-201ENST00000437768 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
CASC6-201ENST00000437768 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
CASC6-201ENST00000437768 AHNAKQ09666 5890 aaKnown RBP1.19□□□□□ -2.22
CASC6-201ENST00000437768 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
CASC6-201ENST00000437768 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
CASC6-201ENST00000437768 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
CASC6-201ENST00000437768 AHNAK2Q8IVF2 5795 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 68.9 ms