RNA–Protein interactions for RNA: ENST00000437034.6

CAST-209, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 3,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-209ENST00000437034 KRTAP10-12P60413 245 aa1.89□□□□□ -2.11
CAST-209ENST00000437034 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
CAST-209ENST00000437034 LPAP08519 4548 aa1.83□□□□□ -2.12
CAST-209ENST00000437034 KRTAP4-1Q9BYQ7 146 aa1.81□□□□□ -2.12
CAST-209ENST00000437034 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.12
CAST-209ENST00000437034 KRTAP12-3P60328 96 aa1.78□□□□□ -2.12
CAST-209ENST00000437034 SMR3BP02814 79 aaPredicted RBP1.77□□□□□ -2.13
CAST-209ENST00000437034 LCE3AQ5TA76 89 aa1.77□□□□□ -2.13
CAST-209ENST00000437034 KRTAP2-3P0C7H8 128 aa1.75□□□□□ -2.13
CAST-209ENST00000437034 KRTAP2-4Q9BYR9 128 aa1.75□□□□□ -2.13
CAST-209ENST00000437034 KRTAP2-1Q9BYU5 128 aa1.75□□□□□ -2.13
CAST-209ENST00000437034 RNF213Q63HN8 5207 aa1.74□□□□□ -2.13
CAST-209ENST00000437034 FAT4Q6V0I7 4981 aa1.73□□□□□ -2.13
CAST-209ENST00000437034 KRTAP19-8Q3LI54 63 aa1.73□□□□□ -2.13
CAST-209ENST00000437034 SPRR2GQ9BYE4 73 aa1.73□□□□□ -2.13
CAST-209ENST00000437034 MT1HP80294 61 aa1.72□□□□□ -2.13
CAST-209ENST00000437034 KRTAP8-1Q8IUC2 63 aa1.7□□□□□ -2.14
CAST-209ENST00000437034 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
CAST-209ENST00000437034 PRM1P04553 51 aa1.68□□□□□ -2.14
CAST-209ENST00000437034 UBR4Q5T4S7 5183 aa1.68□□□□□ -2.14
CAST-209ENST00000437034 KRTAP5-9P26371 169 aa1.67□□□□□ -2.14
CAST-209ENST00000437034 MT2AP02795 61 aa1.64□□□□□ -2.15
CAST-209ENST00000437034 MT1FP04733 61 aa1.6□□□□□ -2.15
CAST-209ENST00000437034 USH2AO75445 5202 aa1.6□□□□□ -2.15
CAST-209ENST00000437034 MT1BP07438 61 aa1.6□□□□□ -2.15
CAST-209ENST00000437034 KRTAP19-6Q3LI70 58 aa1.59□□□□□ -2.15
CAST-209ENST00000437034 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
CAST-209ENST00000437034 SYNE1Q8NF91 8797 aaKnown RBP1.58□□□□□ -2.16
CAST-209ENST00000437034 SSPOA2VEC9 5147 aa1.57□□□□□ -2.16
CAST-209ENST00000437034 KRTAP4-4Q9BYR3 166 aa1.56□□□□□ -2.16
CAST-209ENST00000437034 KRTAP9-6A8MVA2 160 aa1.55□□□□□ -2.16
CAST-209ENST00000437034 KRTAP5-4Q6L8H1 288 aa1.55□□□□□ -2.16
CAST-209ENST00000437034 OBSCNQ5VST9 7968 aa1.54□□□□□ -2.16
CAST-209ENST00000437034 MT1XP80297 61 aa1.53□□□□□ -2.16
CAST-209ENST00000437034 MUC2Q02817 5179 aa1.52□□□□□ -2.17
CAST-209ENST00000437034 AHNAK2Q8IVF2 5795 aa1.49□□□□□ -2.17
CAST-209ENST00000437034 CRCT1Q9UGL9 99 aa1.47□□□□□ -2.17
CAST-209ENST00000437034 KRTAP5-5Q701N2 237 aaPredicted RBP1.43□□□□□ -2.18
CAST-209ENST00000437034 KRTAP19-5Q3LI72 72 aa1.42□□□□□ -2.18
CAST-209ENST00000437034 KRTAP5-1Q6L8H4 278 aa1.42□□□□□ -2.18
CAST-209ENST00000437034 LCE1CQ5T751 118 aa1.4□□□□□ -2.19
CAST-209ENST00000437034 LCE1BQ5T7P3 118 aa1.4□□□□□ -2.19
CAST-209ENST00000437034 KRTAP19-7Q3SYF9 63 aa1.39□□□□□ -2.19
CAST-209ENST00000437034 MT1EP04732 61 aa1.37□□□□□ -2.19
CAST-209ENST00000437034 KRTAP5-8O75690 187 aa1.37□□□□□ -2.19
CAST-209ENST00000437034 KRTAP6-2Q3LI66 62 aa1.36□□□□□ -2.19
CAST-209ENST00000437034 KRTAP19-3Q7Z4W3 81 aa1.34□□□□□ -2.19
CAST-209ENST00000437034 KRTAP20-1Q3LI63 56 aa1.33□□□□□ -2.2
CAST-209ENST00000437034 KRTAP5-2Q701N4 177 aa1.33□□□□□ -2.2
CAST-209ENST00000437034 NEBP20929 6669 aa1.31□□□□□ -2.2
CAST-209ENST00000437034 MT1LQ93083 61 aa1.31□□□□□ -2.2
CAST-209ENST00000437034 FCGBPQ9Y6R7 5405 aaPredicted RBP1.3□□□□□ -2.2
CAST-209ENST00000437034 MT1AP04731 61 aa1.29□□□□□ -2.2
CAST-209ENST00000437034 KMT2DO14686 5537 aa1.29□□□□□ -2.2
CAST-209ENST00000437034 MT1GP13640 62 aa1.28□□□□□ -2.21
CAST-209ENST00000437034 SPRR2DP22532 72 aa1.26□□□□□ -2.21
CAST-209ENST00000437034 MT1MQ8N339 61 aa1.25□□□□□ -2.21
CAST-209ENST00000437034 KRTAP4-3Q9BYR4 195 aa1.25□□□□□ -2.21
CAST-209ENST00000437034 MUC12Q9UKN1 5478 aa1.23□□□□□ -2.21
CAST-209ENST00000437034 SPRR2FQ96RM1 72 aa1.19□□□□□ -2.22
CAST-209ENST00000437034 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
CAST-209ENST00000437034 SPRR2BP35325 72 aa1.18□□□□□ -2.22
CAST-209ENST00000437034 SYNE2Q8WXH0 6885 aaKnown RBP1.16□□□□□ -2.22
CAST-209ENST00000437034 SPRR2AP35326 72 aa1.16□□□□□ -2.22
CAST-209ENST00000437034 FSIP2Q5CZC0 6907 aa1.15□□□□□ -2.23
CAST-209ENST00000437034 KRTAP5-7Q6L8G8 165 aa1.13□□□□□ -2.23
CAST-209ENST00000437034 SPRR2EP22531 72 aa1.12□□□□□ -2.23
CAST-209ENST00000437034 MDN1Q9NU22 5596 aa1.11□□□□□ -2.23
CAST-209ENST00000437034 MACF1Q9UPN3 7388 aaKnown RBP1.1□□□□□ -2.23
CAST-209ENST00000437034 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
CAST-209ENST00000437034 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
CAST-209ENST00000437034 KRTAP6-1Q3LI64 71 aa1.04□□□□□ -2.24
CAST-209ENST00000437034 KRTAP20-2Q3LI61 65 aa1.03□□□□□ -2.24
CAST-209ENST00000437034 DSTQ03001 7570 aaKnown RBP0.92□□□□□ -2.26
CAST-209ENST00000437034 KRTAP21-2Q3LI59 83 aa0.8□□□□□ -2.28
CAST-209ENST00000437034 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
CAST-209ENST00000437034 MT4P47944 62 aa0.76□□□□□ -2.29
CAST-209ENST00000437034 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms