RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 KRTAP2-3P0C7H8 128 aa2.16□□□□□ -2.06
VRK2-206ENST00000435505 KRTAP2-4Q9BYR9 128 aa2.16□□□□□ -2.06
VRK2-206ENST00000435505 KRTAP2-1Q9BYU5 128 aa2.16□□□□□ -2.06
VRK2-206ENST00000435505 KIAA1109Q2LD37 5005 aa2.15□□□□□ -2.06
VRK2-206ENST00000435505 KRTAP9-6A8MVA2 160 aa2.15□□□□□ -2.07
VRK2-206ENST00000435505 RYR3Q15413 4870 aa2.15□□□□□ -2.07
VRK2-206ENST00000435505 MUC2Q02817 5179 aa2.14□□□□□ -2.07
VRK2-206ENST00000435505 MT1XP80297 61 aa2.12□□□□□ -2.07
VRK2-206ENST00000435505 HERC2O95714 4834 aa2.1□□□□□ -2.07
VRK2-206ENST00000435505 KRTAP5-4Q6L8H1 288 aa2.08□□□□□ -2.08
VRK2-206ENST00000435505 UBR4Q5T4S7 5183 aa2.07□□□□□ -2.08
VRK2-206ENST00000435505 KRTAP19-5Q3LI72 72 aa2.07□□□□□ -2.08
VRK2-206ENST00000435505 HMCN2Q8NDA2 5059 aa2.05□□□□□ -2.08
VRK2-206ENST00000435505 MT1BP07438 61 aa2.05□□□□□ -2.08
VRK2-206ENST00000435505 FAT4Q6V0I7 4981 aa2.04□□□□□ -2.08
VRK2-206ENST00000435505 MT1FP04733 61 aa2.04□□□□□ -2.08
VRK2-206ENST00000435505 KRTAP19-8Q3LI54 63 aa2.04□□□□□ -2.08
VRK2-206ENST00000435505 BIRC6Q9NR09 4857 aa2.03□□□□□ -2.08
VRK2-206ENST00000435505 M0R2T5 61 aa2.03□□□□□ -2.08
VRK2-206ENST00000435505 EPPK1P58107 5090 aaKnown RBP2.02□□□□□ -2.09
VRK2-206ENST00000435505 MT2AP02795 61 aa2.01□□□□□ -2.09
VRK2-206ENST00000435505 MT1HP80294 61 aa1.93□□□□□ -2.1
VRK2-206ENST00000435505 KMT2DO14686 5537 aa1.93□□□□□ -2.1
VRK2-206ENST00000435505 RNF213Q63HN8 5207 aa1.92□□□□□ -2.1
VRK2-206ENST00000435505 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
VRK2-206ENST00000435505 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
VRK2-206ENST00000435505 KRTAP19-7Q3SYF9 63 aa1.88□□□□□ -2.11
VRK2-206ENST00000435505 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
VRK2-206ENST00000435505 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
VRK2-206ENST00000435505 MT1LQ93083 61 aa1.85□□□□□ -2.11
VRK2-206ENST00000435505 PRM1P04553 51 aa1.84□□□□□ -2.11
VRK2-206ENST00000435505 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
VRK2-206ENST00000435505 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
VRK2-206ENST00000435505 MT1EP04732 61 aa1.79□□□□□ -2.12
VRK2-206ENST00000435505 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
VRK2-206ENST00000435505 KRTAP5-5Q701N2 237 aaPredicted RBP1.79□□□□□ -2.12
VRK2-206ENST00000435505 MT1GP13640 62 aa1.78□□□□□ -2.12
VRK2-206ENST00000435505 KRTAP4-3Q9BYR4 195 aa1.78□□□□□ -2.12
VRK2-206ENST00000435505 CRCT1Q9UGL9 99 aa1.78□□□□□ -2.12
VRK2-206ENST00000435505 USH2AO75445 5202 aa1.74□□□□□ -2.13
VRK2-206ENST00000435505 KRTAP21-3Q3LHN1 58 aa1.71□□□□□ -2.14
VRK2-206ENST00000435505 SYNE1Q8NF91 8797 aaKnown RBP1.7□□□□□ -2.14
VRK2-206ENST00000435505 MT1AP04731 61 aa1.69□□□□□ -2.14
VRK2-206ENST00000435505 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
VRK2-206ENST00000435505 LCE1BQ5T7P3 118 aa1.67□□□□□ -2.14
VRK2-206ENST00000435505 KRTAP6-2Q3LI66 62 aa1.67□□□□□ -2.14
VRK2-206ENST00000435505 MT1MQ8N339 61 aa1.65□□□□□ -2.15
VRK2-206ENST00000435505 KRTAP6-1Q3LI64 71 aa1.6□□□□□ -2.15
VRK2-206ENST00000435505 SSPOA2VEC9 5147 aa1.59□□□□□ -2.15
VRK2-206ENST00000435505 FCGBPQ9Y6R7 5405 aaPredicted RBP1.59□□□□□ -2.16
VRK2-206ENST00000435505 KRTAP19-3Q7Z4W3 81 aa1.58□□□□□ -2.16
VRK2-206ENST00000435505 MUC12Q9UKN1 5478 aa1.57□□□□□ -2.16
VRK2-206ENST00000435505 SPRR2FQ96RM1 72 aa1.56□□□□□ -2.16
VRK2-206ENST00000435505 OBSCNQ5VST9 7968 aa1.54□□□□□ -2.16
VRK2-206ENST00000435505 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
VRK2-206ENST00000435505 NEBP20929 6669 aa1.53□□□□□ -2.16
VRK2-206ENST00000435505 DSTQ03001 7570 aaKnown RBP1.51□□□□□ -2.17
VRK2-206ENST00000435505 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
VRK2-206ENST00000435505 SPRR2AP35326 72 aa1.42□□□□□ -2.18
VRK2-206ENST00000435505 SPRR2EP22531 72 aa1.41□□□□□ -2.18
VRK2-206ENST00000435505 KRTAP20-1Q3LI63 56 aa1.4□□□□□ -2.18
VRK2-206ENST00000435505 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
VRK2-206ENST00000435505 SPRR2DP22532 72 aa1.38□□□□□ -2.19
VRK2-206ENST00000435505 KRTAP19-6Q3LI70 58 aa1.38□□□□□ -2.19
VRK2-206ENST00000435505 SPRR2BP35325 72 aa1.36□□□□□ -2.19
VRK2-206ENST00000435505 MACF1Q9UPN3 7388 aaKnown RBP1.35□□□□□ -2.19
VRK2-206ENST00000435505 SYNE2Q8WXH0 6885 aaKnown RBP1.33□□□□□ -2.2
VRK2-206ENST00000435505 MDN1Q9NU22 5596 aa1.29□□□□□ -2.2
VRK2-206ENST00000435505 FSIP2Q5CZC0 6907 aa1.25□□□□□ -2.21
VRK2-206ENST00000435505 MUC5ACP98088 5654 aa1.24□□□□□ -2.21
VRK2-206ENST00000435505 KRTAP5-10Q6L8G5 202 aa1.21□□□□□ -2.22
VRK2-206ENST00000435505 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
VRK2-206ENST00000435505 KRTAP21-2Q3LI59 83 aa1.04□□□□□ -2.24
VRK2-206ENST00000435505 KRTAP20-2Q3LI61 65 aa0.99□□□□□ -2.25
VRK2-206ENST00000435505 MT4P47944 62 aa0.98□□□□□ -2.25
VRK2-206ENST00000435505 PHGR1C9JFL3 82 aa0.67□□□□□ -2.3
VRK2-206ENST00000435505 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 9.6 ms