RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.01□□□□□ -1.77
UBE3B-203ENST00000434735 RNF213Q63HN8 5207 aa3.99□□□□□ -1.77
UBE3B-203ENST00000434735 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
UBE3B-203ENST00000434735 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
UBE3B-203ENST00000434735 MT1EP04732 61 aa3.96□□□□□ -1.78
UBE3B-203ENST00000434735 FAT4Q6V0I7 4981 aa3.96□□□□□ -1.78
UBE3B-203ENST00000434735 MUC2Q02817 5179 aa3.94□□□□□ -1.78
UBE3B-203ENST00000434735 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
UBE3B-203ENST00000434735 MT1LQ93083 61 aa3.94□□□□□ -1.78
UBE3B-203ENST00000434735 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
UBE3B-203ENST00000434735 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
UBE3B-203ENST00000434735 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
UBE3B-203ENST00000434735 LCE1DQ5T752 114 aa3.91□□□□□ -1.78
UBE3B-203ENST00000434735 MT1MQ8N339 61 aa3.9□□□□□ -1.79
UBE3B-203ENST00000434735 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
UBE3B-203ENST00000434735 MT3P25713 68 aa3.86□□□□□ -1.79
UBE3B-203ENST00000434735 KRTAP4-9Q9BYQ8 210 aa3.85□□□□□ -1.79
UBE3B-203ENST00000434735 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.8
UBE3B-203ENST00000434735 TNXBP22105 4242 aa3.81□□□□□ -1.8
UBE3B-203ENST00000434735 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
UBE3B-203ENST00000434735 KRTAP2-1Q9BYU5 128 aa3.79□□□□□ -1.8
UBE3B-203ENST00000434735 LOC100996750A0A140TA64 210 aa3.79□□□□□ -1.8
UBE3B-203ENST00000434735 FLGP20930 4061 aaPredicted RBP3.78□□□□□ -1.8
UBE3B-203ENST00000434735 MUC17Q685J3 4493 aa3.77□□□□□ -1.81
UBE3B-203ENST00000434735 LCE5AQ5TCM9 118 aa3.76□□□□□ -1.81
UBE3B-203ENST00000434735 HMCN2Q8NDA2 5059 aa3.74□□□□□ -1.81
UBE3B-203ENST00000434735 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.82
UBE3B-203ENST00000434735 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
UBE3B-203ENST00000434735 PRM1P04553 51 aa3.57□□□□□ -1.84
UBE3B-203ENST00000434735 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
UBE3B-203ENST00000434735 MT1AP04731 61 aa3.54□□□□□ -1.84
UBE3B-203ENST00000434735 MACF1Q9UPN3 7388 aaKnown RBP3.53□□□□□ -1.84
UBE3B-203ENST00000434735 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
UBE3B-203ENST00000434735 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
UBE3B-203ENST00000434735 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
UBE3B-203ENST00000434735 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
UBE3B-203ENST00000434735 NEBP20929 6669 aa3.46□□□□□ -1.86
UBE3B-203ENST00000434735 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
UBE3B-203ENST00000434735 DSTQ03001 7570 aaKnown RBP3.43□□□□□ -1.86
UBE3B-203ENST00000434735 KMT2DO14686 5537 aa3.39□□□□□ -1.87
UBE3B-203ENST00000434735 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
UBE3B-203ENST00000434735 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
UBE3B-203ENST00000434735 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.87
UBE3B-203ENST00000434735 USH2AO75445 5202 aa3.33□□□□□ -1.88
UBE3B-203ENST00000434735 KRTAP9-4Q9BYQ2 154 aa3.3□□□□□ -1.88
UBE3B-203ENST00000434735 FCGBPQ9Y6R7 5405 aaPredicted RBP3.21□□□□□ -1.9
UBE3B-203ENST00000434735 SSPOA2VEC9 5147 aa3.16□□□□□ -1.9
UBE3B-203ENST00000434735 MDN1Q9NU22 5596 aa3.15□□□□□ -1.9
UBE3B-203ENST00000434735 KRTAP5-9P26371 169 aa3.12□□□□□ -1.91
UBE3B-203ENST00000434735 KRTAP4-6Q9BYQ5 205 aa3.11□□□□□ -1.91
UBE3B-203ENST00000434735 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
UBE3B-203ENST00000434735 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
UBE3B-203ENST00000434735 MUC12Q9UKN1 5478 aa2.88□□□□□ -1.95
UBE3B-203ENST00000434735 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
UBE3B-203ENST00000434735 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
UBE3B-203ENST00000434735 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
UBE3B-203ENST00000434735 KRTAP4-11Q9BYQ6 195 aa2.78□□□□□ -1.96
UBE3B-203ENST00000434735 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
UBE3B-203ENST00000434735 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
UBE3B-203ENST00000434735 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
UBE3B-203ENST00000434735 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2
UBE3B-203ENST00000434735 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
UBE3B-203ENST00000434735 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
UBE3B-203ENST00000434735 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
UBE3B-203ENST00000434735 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
UBE3B-203ENST00000434735 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
UBE3B-203ENST00000434735 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
UBE3B-203ENST00000434735 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
UBE3B-203ENST00000434735 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
UBE3B-203ENST00000434735 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
UBE3B-203ENST00000434735 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
UBE3B-203ENST00000434735 KRTAP5-1Q6L8H4 278 aa1.8□□□□□ -2.12
UBE3B-203ENST00000434735 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
UBE3B-203ENST00000434735 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
UBE3B-203ENST00000434735 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
UBE3B-203ENST00000434735 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.47□□□□□ -2.17
UBE3B-203ENST00000434735 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 150 ms