RNA–Protein interactions for RNA: ENST00000434140.5

ALS2CL-206, Transcript of ALS2 C-terminal like, humanhuman

TSL 1 (best)

Gene ALS2CL, Length 3,937 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CL-206ENST00000434140 KRTAP2-4Q9BYR9 128 aa3.78□□□□□ -1.8
ALS2CL-206ENST00000434140 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
ALS2CL-206ENST00000434140 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
ALS2CL-206ENST00000434140 LOC100996750A0A140TA64 210 aa3.72□□□□□ -1.81
ALS2CL-206ENST00000434140 KRTAP19-7Q3SYF9 63 aa3.72□□□□□ -1.81
ALS2CL-206ENST00000434140 MACF1Q9UPN3 7388 aaKnown RBP3.71□□□□□ -1.82
ALS2CL-206ENST00000434140 MT1GP13640 62 aa3.71□□□□□ -1.82
ALS2CL-206ENST00000434140 SPRR2FQ96RM1 72 aa3.71□□□□□ -1.82
ALS2CL-206ENST00000434140 MUC12Q9UKN1 5478 aa3.71□□□□□ -1.82
ALS2CL-206ENST00000434140 MT1LQ93083 61 aa3.69□□□□□ -1.82
ALS2CL-206ENST00000434140 KRTAP4-3Q9BYR4 195 aa3.67□□□□□ -1.82
ALS2CL-206ENST00000434140 KRTAP9-2Q9BYQ4 174 aa3.66□□□□□ -1.82
ALS2CL-206ENST00000434140 MT1EP04732 61 aa3.63□□□□□ -1.83
ALS2CL-206ENST00000434140 LCE3BQ5TA77 95 aa3.62□□□□□ -1.83
ALS2CL-206ENST00000434140 KRTAP19-6Q3LI70 58 aa3.54□□□□□ -1.84
ALS2CL-206ENST00000434140 KRTAP4-9Q9BYQ8 210 aa3.53□□□□□ -1.84
ALS2CL-206ENST00000434140 MDN1Q9NU22 5596 aa3.5□□□□□ -1.85
ALS2CL-206ENST00000434140 KRTAP19-4Q3LI73 84 aa3.5□□□□□ -1.85
ALS2CL-206ENST00000434140 LCE2DQ5TA82 110 aaPredicted RBP3.49□□□□□ -1.85
ALS2CL-206ENST00000434140 KRTAP9-6A0A140TA67 174 aa3.43□□□□□ -1.86
ALS2CL-206ENST00000434140 KRTAP19-3Q7Z4W3 81 aa3.42□□□□□ -1.86
ALS2CL-206ENST00000434140 MT1MQ8N339 61 aa3.4□□□□□ -1.86
ALS2CL-206ENST00000434140 SPRR2EP22531 72 aa3.38□□□□□ -1.87
ALS2CL-206ENST00000434140 SPRR2BP35325 72 aa3.38□□□□□ -1.87
ALS2CL-206ENST00000434140 SPRR2AP35326 72 aa3.38□□□□□ -1.87
ALS2CL-206ENST00000434140 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
ALS2CL-206ENST00000434140 PRM1P04553 51 aa3.36□□□□□ -1.87
ALS2CL-206ENST00000434140 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
ALS2CL-206ENST00000434140 KRTAP9-7A8MTY7 169 aa3.32□□□□□ -1.88
ALS2CL-206ENST00000434140 SPRR2DP22532 72 aa3.23□□□□□ -1.89
ALS2CL-206ENST00000434140 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.2□□□□□ -1.9
ALS2CL-206ENST00000434140 KRTAP6-1Q3LI64 71 aa3.2□□□□□ -1.9
ALS2CL-206ENST00000434140 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
ALS2CL-206ENST00000434140 LCE5AQ5TCM9 118 aa3.16□□□□□ -1.9
ALS2CL-206ENST00000434140 LCE1AQ5T7P2 110 aa3.12□□□□□ -1.91
ALS2CL-206ENST00000434140 MT1AP04731 61 aa3.11□□□□□ -1.91
ALS2CL-206ENST00000434140 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
ALS2CL-206ENST00000434140 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
ALS2CL-206ENST00000434140 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
ALS2CL-206ENST00000434140 MT4P47944 62 aa3□□□□□ -1.93
ALS2CL-206ENST00000434140 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
ALS2CL-206ENST00000434140 NEBP20929 6669 aa2.91□□□□□ -1.94
ALS2CL-206ENST00000434140 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
ALS2CL-206ENST00000434140 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
ALS2CL-206ENST00000434140 MT3P25713 68 aa2.86□□□□□ -1.95
ALS2CL-206ENST00000434140 KRTAP9-4Q9BYQ2 154 aa2.86□□□□□ -1.95
ALS2CL-206ENST00000434140 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
ALS2CL-206ENST00000434140 LCE1DQ5T752 114 aa2.83□□□□□ -1.96
ALS2CL-206ENST00000434140 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
ALS2CL-206ENST00000434140 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
ALS2CL-206ENST00000434140 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
ALS2CL-206ENST00000434140 LCE4AQ5TA78 99 aa2.59□□□□□ -1.99
ALS2CL-206ENST00000434140 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
ALS2CL-206ENST00000434140 KRTAP20-2Q3LI61 65 aa2.52□□□□□ -2.01
ALS2CL-206ENST00000434140 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
ALS2CL-206ENST00000434140 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.02
ALS2CL-206ENST00000434140 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.03
ALS2CL-206ENST00000434140 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
ALS2CL-206ENST00000434140 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
ALS2CL-206ENST00000434140 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
ALS2CL-206ENST00000434140 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
ALS2CL-206ENST00000434140 KRTAP5-10Q6L8G5 202 aa2.21□□□□□ -2.06
ALS2CL-206ENST00000434140 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
ALS2CL-206ENST00000434140 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
ALS2CL-206ENST00000434140 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
ALS2CL-206ENST00000434140 KRTAP4-12Q9BQ66 201 aa2.11□□□□□ -2.07
ALS2CL-206ENST00000434140 KRTAP4-2Q9BYR5 136 aa2.11□□□□□ -2.07
ALS2CL-206ENST00000434140 KRTAP9-9Q9BYP9 154 aa2.11□□□□□ -2.07
ALS2CL-206ENST00000434140 KRTAP5-8O75690 187 aa2□□□□□ -2.09
ALS2CL-206ENST00000434140 KRTAP5-1Q6L8H4 278 aa1.97□□□□□ -2.09
ALS2CL-206ENST00000434140 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
ALS2CL-206ENST00000434140 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
ALS2CL-206ENST00000434140 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
ALS2CL-206ENST00000434140 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
ALS2CL-206ENST00000434140 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
ALS2CL-206ENST00000434140 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
ALS2CL-206ENST00000434140 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
ALS2CL-206ENST00000434140 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 32 ms