RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 SSPOA2VEC9 5147 aa1.27□□□□□ -2.21
SHPRH-205ENST00000433355 MT1AP04731 61 aa1.26□□□□□ -2.21
SHPRH-205ENST00000433355 DSTQ03001 7570 aaKnown RBP1.25□□□□□ -2.21
SHPRH-205ENST00000433355 KRTAP12-4P60329 112 aa1.25□□□□□ -2.21
SHPRH-205ENST00000433355 MUC2Q02817 5179 aa1.25□□□□□ -2.21
SHPRH-205ENST00000433355 KRTAP19-7Q3SYF9 63 aa1.24□□□□□ -2.21
SHPRH-205ENST00000433355 SPRR2AP35326 72 aa1.23□□□□□ -2.21
SHPRH-205ENST00000433355 SPRR2FQ96RM1 72 aa1.22□□□□□ -2.21
SHPRH-205ENST00000433355 LCE5AQ5TCM9 118 aa1.22□□□□□ -2.21
SHPRH-205ENST00000433355 KRTAP5-9P26371 169 aa1.21□□□□□ -2.22
SHPRH-205ENST00000433355 SPRR2BP35325 72 aa1.21□□□□□ -2.22
SHPRH-205ENST00000433355 LOC100996750A0A140TA64 210 aa1.2□□□□□ -2.22
SHPRH-205ENST00000433355 KRTAP4-6Q9BYQ5 205 aa1.2□□□□□ -2.22
SHPRH-205ENST00000433355 MACF1Q9UPN3 7388 aaKnown RBP1.2□□□□□ -2.22
SHPRH-205ENST00000433355 LCE3EQ5T5B0 92 aa1.19□□□□□ -2.22
SHPRH-205ENST00000433355 AHNAK2Q8IVF2 5795 aa1.19□□□□□ -2.22
SHPRH-205ENST00000433355 KRTAP2-2Q9BYT5 123 aa1.19□□□□□ -2.22
SHPRH-205ENST00000433355 LCE1EQ5T753 118 aa1.18□□□□□ -2.22
SHPRH-205ENST00000433355 FSIP2Q5CZC0 6907 aa1.18□□□□□ -2.22
SHPRH-205ENST00000433355 KRTAP6-3Q3LI67 103 aa1.18□□□□□ -2.22
SHPRH-205ENST00000433355 LCE3DQ9BYE3 92 aa1.17□□□□□ -2.22
SHPRH-205ENST00000433355 FCGBPQ9Y6R7 5405 aaPredicted RBP1.16□□□□□ -2.22
SHPRH-205ENST00000433355 CRCT1Q9UGL9 99 aa1.16□□□□□ -2.22
SHPRH-205ENST00000433355 KMT2DO14686 5537 aa1.15□□□□□ -2.23
SHPRH-205ENST00000433355 HMCN1Q96RW7 5635 aa1.14□□□□□ -2.23
SHPRH-205ENST00000433355 LCE4AQ5TA78 99 aa1.13□□□□□ -2.23
SHPRH-205ENST00000433355 MUC12Q9UKN1 5478 aa1.13□□□□□ -2.23
SHPRH-205ENST00000433355 LPAP08519 4548 aa1.13□□□□□ -2.23
SHPRH-205ENST00000433355 SYNE1Q8NF91 8797 aaKnown RBP1.12□□□□□ -2.23
SHPRH-205ENST00000433355 SPRR2DP22532 72 aa1.12□□□□□ -2.23
SHPRH-205ENST00000433355 GPR98Q8WXG9 6306 aa1.11□□□□□ -2.23
SHPRH-205ENST00000433355 SPRR2EP22531 72 aa1.11□□□□□ -2.23
SHPRH-205ENST00000433355 KRTAP9-4Q9BYQ2 154 aa1.09□□□□□ -2.24
SHPRH-205ENST00000433355 SYNE2Q8WXH0 6885 aaKnown RBP1.08□□□□□ -2.24
SHPRH-205ENST00000433355 MUC5BQ9HC84 5762 aaPredicted RBP1.06□□□□□ -2.24
SHPRH-205ENST00000433355 KRTAP9-2Q9BYQ4 174 aa1.06□□□□□ -2.24
SHPRH-205ENST00000433355 KRTAP9-6A8MVA2 160 aa1.05□□□□□ -2.24
SHPRH-205ENST00000433355 KRTAP4-12Q9BQ66 201 aa1.05□□□□□ -2.24
SHPRH-205ENST00000433355 KRTAP4-8A0A0G2JLE6 195 aa1.05□□□□□ -2.24
SHPRH-205ENST00000433355 KRTAP4-8Q9BYQ9 185 aa1.05□□□□□ -2.24
SHPRH-205ENST00000433355 KRTAP9-9Q9BYP9 154 aa1.04□□□□□ -2.24
SHPRH-205ENST00000433355 NEBP20929 6669 aa1.04□□□□□ -2.24
SHPRH-205ENST00000433355 KRTAP20-1Q3LI63 56 aa1.03□□□□□ -2.24
SHPRH-205ENST00000433355 LCE3BQ5TA77 95 aa1.03□□□□□ -2.24
SHPRH-205ENST00000433355 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.02□□□□□ -2.25
SHPRH-205ENST00000433355 OBSCNQ5VST9 7968 aa1.02□□□□□ -2.25
SHPRH-205ENST00000433355 KRTAP5-5Q701N2 237 aaPredicted RBP1.01□□□□□ -2.25
SHPRH-205ENST00000433355 KRTAP5-4Q6L8H1 288 aa1.01□□□□□ -2.25
SHPRH-205ENST00000433355 KRTAP9-6A0A140TA67 174 aa1□□□□□ -2.25
SHPRH-205ENST00000433355 KRTAP9-7A8MTY7 169 aa0.98□□□□□ -2.25
SHPRH-205ENST00000433355 MUC5ACP98088 5654 aa0.98□□□□□ -2.25
SHPRH-205ENST00000433355 KRTAP6-1Q3LI64 71 aa0.96□□□□□ -2.26
SHPRH-205ENST00000433355 LCE1DQ5T752 114 aa0.95□□□□□ -2.26
SHPRH-205ENST00000433355 KRTAP4-2Q9BYR5 136 aa0.93□□□□□ -2.26
SHPRH-205ENST00000433355 KRTAP4-7Q9BYR0 210 aa0.93□□□□□ -2.26
SHPRH-205ENST00000433355 KRTAP5-2Q701N4 177 aa0.92□□□□□ -2.26
SHPRH-205ENST00000433355 KRTAP6-2Q3LI66 62 aa0.92□□□□□ -2.26
SHPRH-205ENST00000433355 PRM1P04553 51 aa0.91□□□□□ -2.26
SHPRH-205ENST00000433355 LCE1CQ5T751 118 aa0.9□□□□□ -2.27
SHPRH-205ENST00000433355 LCE1BQ5T7P3 118 aa0.9□□□□□ -2.27
SHPRH-205ENST00000433355 KRTAP20-2Q3LI61 65 aa0.89□□□□□ -2.27
SHPRH-205ENST00000433355 KRTAP5-3Q6L8H2 238 aa0.87□□□□□ -2.27
SHPRH-205ENST00000433355 KRTAP5-8O75690 187 aa0.87□□□□□ -2.27
SHPRH-205ENST00000433355 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.87□□□□□ -2.27
SHPRH-205ENST00000433355 KRTAP4-9Q9BYQ8 210 aa0.86□□□□□ -2.27
SHPRH-205ENST00000433355 KRTAP5-7Q6L8G8 165 aa0.84□□□□□ -2.28
SHPRH-205ENST00000433355 KRTAP4-3Q9BYR4 195 aa0.84□□□□□ -2.28
SHPRH-205ENST00000433355 KRTAP4-11Q9BYQ6 195 aa0.83□□□□□ -2.28
SHPRH-205ENST00000433355 MT4P47944 62 aa0.8□□□□□ -2.28
SHPRH-205ENST00000433355 KRTAP5-11Q6L8G4 156 aa0.8□□□□□ -2.28
SHPRH-205ENST00000433355 KRTAP5-10Q6L8G5 202 aa0.78□□□□□ -2.28
SHPRH-205ENST00000433355 KRTAP5-1Q6L8H4 278 aa0.76□□□□□ -2.29
SHPRH-205ENST00000433355 MUC19Q7Z5P9 8384 aa0.7□□□□□ -2.3
SHPRH-205ENST00000433355 KRTAP21-2Q3LI59 83 aa0.66□□□□□ -2.3
SHPRH-205ENST00000433355 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
SHPRH-205ENST00000433355 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
SHPRH-205ENST00000433355 KRTAP4-4Q9BYR3 166 aa0.55□□□□□ -2.32
SHPRH-205ENST00000433355 MUC16Q8WXI7 14507 aa0.46□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 71 ms