RNA–Protein interactions for RNA: ENST00000432641.2

SDHAF3-202, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHAF3, Length 2,060 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-202ENST00000432641 MT1GP13640 62 aa6.88□□□□□ -1.31
SDHAF3-202ENST00000432641 MT1MQ8N339 61 aa6.79□□□□□ -1.32
SDHAF3-202ENST00000432641 KRTAP9-2Q9BYQ4 174 aa6.78□□□□□ -1.32
SDHAF3-202ENST00000432641 KRTAP2-3P0C7H8 128 aa6.77□□□□□ -1.33
SDHAF3-202ENST00000432641 KRTAP2-4Q9BYR9 128 aa6.77□□□□□ -1.33
SDHAF3-202ENST00000432641 KRTAP2-1Q9BYU5 128 aa6.77□□□□□ -1.33
SDHAF3-202ENST00000432641 SPRR2FQ96RM1 72 aa6.74□□□□□ -1.33
SDHAF3-202ENST00000432641 LCE5AQ5TCM9 118 aa6.69□□□□□ -1.34
SDHAF3-202ENST00000432641 CRCT1Q9UGL9 99 aa6.65□□□□□ -1.34
SDHAF3-202ENST00000432641 KRTAP4-3Q9BYR4 195 aa6.62□□□□□ -1.35
SDHAF3-202ENST00000432641 MUC12Q9UKN1 5478 aa6.62□□□□□ -1.35
SDHAF3-202ENST00000432641 MACF1Q9UPN3 7388 aaKnown RBP6.61□□□□□ -1.35
SDHAF3-202ENST00000432641 KRTAP5-9P26371 169 aa6.53□□□□□ -1.36
SDHAF3-202ENST00000432641 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
SDHAF3-202ENST00000432641 LCE1AQ5T7P2 110 aa6.38□□□□□ -1.39
SDHAF3-202ENST00000432641 SYNE2Q8WXH0 6885 aaKnown RBP6.31□□□□□ -1.4
SDHAF3-202ENST00000432641 SPRR2EP22531 72 aa6.27□□□□□ -1.41
SDHAF3-202ENST00000432641 SPRR2BP35325 72 aa6.27□□□□□ -1.41
SDHAF3-202ENST00000432641 SPRR2AP35326 72 aa6.27□□□□□ -1.41
SDHAF3-202ENST00000432641 KRTAP6-3Q3LI67 103 aa6.19□□□□□ -1.42
SDHAF3-202ENST00000432641 MDN1Q9NU22 5596 aa6.18□□□□□ -1.42
SDHAF3-202ENST00000432641 DSTQ03001 7570 aaKnown RBP6.14□□□□□ -1.43
SDHAF3-202ENST00000432641 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.13□□□□□ -1.43
SDHAF3-202ENST00000432641 MT1AP04731 61 aa6.11□□□□□ -1.43
SDHAF3-202ENST00000432641 KRTAP5-5Q701N2 237 aaPredicted RBP6.07□□□□□ -1.44
SDHAF3-202ENST00000432641 KRTAP9-6A0A140TA67 174 aa6.05□□□□□ -1.44
SDHAF3-202ENST00000432641 SPRR2DP22532 72 aa6.03□□□□□ -1.44
SDHAF3-202ENST00000432641 KRTAP6-1Q3LI64 71 aa6.02□□□□□ -1.45
SDHAF3-202ENST00000432641 LCE3BQ5TA77 95 aa5.97□□□□□ -1.45
SDHAF3-202ENST00000432641 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
SDHAF3-202ENST00000432641 KRTAP9-4Q9BYQ2 154 aa5.76□□□□□ -1.49
SDHAF3-202ENST00000432641 SYNE1Q8NF91 8797 aaKnown RBP5.69□□□□□ -1.5
SDHAF3-202ENST00000432641 KRTAP4-9Q9BYQ8 210 aa5.67□□□□□ -1.5
SDHAF3-202ENST00000432641 LCE3DQ9BYE3 92 aa5.65□□□□□ -1.51
SDHAF3-202ENST00000432641 NEBP20929 6669 aa5.64□□□□□ -1.51
SDHAF3-202ENST00000432641 KRTAP9-7A8MTY7 169 aa5.62□□□□□ -1.51
SDHAF3-202ENST00000432641 KRTAP5-4Q6L8H1 288 aa5.57□□□□□ -1.52
SDHAF3-202ENST00000432641 KRTAP4-6Q9BYQ5 205 aa5.55□□□□□ -1.52
SDHAF3-202ENST00000432641 LCE3EQ5T5B0 92 aa5.55□□□□□ -1.52
SDHAF3-202ENST00000432641 MT3P25713 68 aa5.53□□□□□ -1.52
SDHAF3-202ENST00000432641 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
SDHAF3-202ENST00000432641 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
SDHAF3-202ENST00000432641 PRM1P04553 51 aa5.32□□□□□ -1.56
SDHAF3-202ENST00000432641 KRTAP2-2Q9BYT5 123 aa5.23□□□□□ -1.57
SDHAF3-202ENST00000432641 MT4P47944 62 aa5.2□□□□□ -1.58
SDHAF3-202ENST00000432641 KRTAP20-2Q3LI61 65 aa5.18□□□□□ -1.58
SDHAF3-202ENST00000432641 KRTAP5-2Q701N4 177 aa5.15□□□□□ -1.59
SDHAF3-202ENST00000432641 KRTAP20-1Q3LI63 56 aa5.09□□□□□ -1.59
SDHAF3-202ENST00000432641 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
SDHAF3-202ENST00000432641 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.61
SDHAF3-202ENST00000432641 OBSCNQ5VST9 7968 aa4.96□□□□□ -1.61
SDHAF3-202ENST00000432641 HMCN1Q96RW7 5635 aa4.95□□□□□ -1.62
SDHAF3-202ENST00000432641 LCE1EQ5T753 118 aa4.69□□□□□ -1.66
SDHAF3-202ENST00000432641 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
SDHAF3-202ENST00000432641 KRTAP5-10Q6L8G5 202 aa4.4□□□□□ -1.71
SDHAF3-202ENST00000432641 LCE1CQ5T751 118 aa4.37□□□□□ -1.71
SDHAF3-202ENST00000432641 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
SDHAF3-202ENST00000432641 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
SDHAF3-202ENST00000432641 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
SDHAF3-202ENST00000432641 KRTAP4-2Q9BYR5 136 aa4.31□□□□□ -1.72
SDHAF3-202ENST00000432641 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
SDHAF3-202ENST00000432641 KRTAP5-8O75690 187 aa4.2□□□□□ -1.74
SDHAF3-202ENST00000432641 KRTAP5-7Q6L8G8 165 aa4.19□□□□□ -1.74
SDHAF3-202ENST00000432641 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
SDHAF3-202ENST00000432641 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.15□□□□□ -1.75
SDHAF3-202ENST00000432641 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
SDHAF3-202ENST00000432641 KRTAP21-2Q3LI59 83 aa3.93□□□□□ -1.78
SDHAF3-202ENST00000432641 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
SDHAF3-202ENST00000432641 GPR98Q8WXG9 6306 aa3.56□□□□□ -1.84
SDHAF3-202ENST00000432641 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.85
SDHAF3-202ENST00000432641 KRTAP21-1Q3LI58 79 aa3.48□□□□□ -1.85
SDHAF3-202ENST00000432641 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
SDHAF3-202ENST00000432641 LCE1FQ5T754 118 aa3.34□□□□□ -1.88
SDHAF3-202ENST00000432641 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
SDHAF3-202ENST00000432641 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.94
SDHAF3-202ENST00000432641 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
SDHAF3-202ENST00000432641 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 126.7 ms