RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
CHFR-203ENST00000432561 DSTQ03001 7570 aaKnown RBP5.54□□□□□ -1.52
CHFR-203ENST00000432561 KRTAP2-3P0C7H8 128 aa5.53□□□□□ -1.52
CHFR-203ENST00000432561 KRTAP2-4Q9BYR9 128 aa5.53□□□□□ -1.52
CHFR-203ENST00000432561 KRTAP2-1Q9BYU5 128 aa5.53□□□□□ -1.52
CHFR-203ENST00000432561 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
CHFR-203ENST00000432561 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
CHFR-203ENST00000432561 MT1GP13640 62 aa5.47□□□□□ -1.53
CHFR-203ENST00000432561 KRTAP19-3Q7Z4W3 81 aa5.44□□□□□ -1.54
CHFR-203ENST00000432561 MT1MQ8N339 61 aa5.44□□□□□ -1.54
CHFR-203ENST00000432561 CRCT1Q9UGL9 99 aa5.43□□□□□ -1.54
CHFR-203ENST00000432561 SPRR2FQ96RM1 72 aa5.37□□□□□ -1.55
CHFR-203ENST00000432561 KRTAP9-2Q9BYQ4 174 aa5.37□□□□□ -1.55
CHFR-203ENST00000432561 SYNE2Q8WXH0 6885 aaKnown RBP5.36□□□□□ -1.55
CHFR-203ENST00000432561 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
CHFR-203ENST00000432561 MDN1Q9NU22 5596 aa5.24□□□□□ -1.57
CHFR-203ENST00000432561 KRTAP9-6A0A140TA67 174 aa5.14□□□□□ -1.59
CHFR-203ENST00000432561 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
CHFR-203ENST00000432561 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
CHFR-203ENST00000432561 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
CHFR-203ENST00000432561 KRTAP4-9Q9BYQ8 210 aa4.97□□□□□ -1.61
CHFR-203ENST00000432561 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
CHFR-203ENST00000432561 KRTAP5-9P26371 169 aa4.93□□□□□ -1.62
CHFR-203ENST00000432561 KRTAP12-4P60329 112 aa4.93□□□□□ -1.62
CHFR-203ENST00000432561 SPRR2EP22531 72 aa4.91□□□□□ -1.62
CHFR-203ENST00000432561 SPRR2BP35325 72 aa4.91□□□□□ -1.62
CHFR-203ENST00000432561 SPRR2AP35326 72 aa4.91□□□□□ -1.62
CHFR-203ENST00000432561 MT1AP04731 61 aa4.82□□□□□ -1.64
CHFR-203ENST00000432561 KRTAP5-5Q701N2 237 aaPredicted RBP4.78□□□□□ -1.64
CHFR-203ENST00000432561 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
CHFR-203ENST00000432561 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
CHFR-203ENST00000432561 SPRR2DP22532 72 aa4.69□□□□□ -1.66
CHFR-203ENST00000432561 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.67
CHFR-203ENST00000432561 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
CHFR-203ENST00000432561 KRTAP6-3Q3LI67 103 aa4.57□□□□□ -1.68
CHFR-203ENST00000432561 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
CHFR-203ENST00000432561 LCE3EQ5T5B0 92 aa4.55□□□□□ -1.68
CHFR-203ENST00000432561 KRTAP6-2Q3LI66 62 aa4.46□□□□□ -1.69
CHFR-203ENST00000432561 NEBP20929 6669 aa4.38□□□□□ -1.71
CHFR-203ENST00000432561 PRM1P04553 51 aa4.36□□□□□ -1.71
CHFR-203ENST00000432561 MT3P25713 68 aa4.33□□□□□ -1.72
CHFR-203ENST00000432561 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
CHFR-203ENST00000432561 KRTAP4-6Q9BYQ5 205 aa4.22□□□□□ -1.73
CHFR-203ENST00000432561 MT4P47944 62 aa4.21□□□□□ -1.74
CHFR-203ENST00000432561 KRTAP20-1Q3LI63 56 aa4.08□□□□□ -1.76
CHFR-203ENST00000432561 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
CHFR-203ENST00000432561 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
CHFR-203ENST00000432561 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
CHFR-203ENST00000432561 LCE4AQ5TA78 99 aa3.96□□□□□ -1.77
CHFR-203ENST00000432561 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
CHFR-203ENST00000432561 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
CHFR-203ENST00000432561 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
CHFR-203ENST00000432561 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
CHFR-203ENST00000432561 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
CHFR-203ENST00000432561 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
CHFR-203ENST00000432561 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
CHFR-203ENST00000432561 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
CHFR-203ENST00000432561 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
CHFR-203ENST00000432561 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
CHFR-203ENST00000432561 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.86
CHFR-203ENST00000432561 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
CHFR-203ENST00000432561 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
CHFR-203ENST00000432561 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
CHFR-203ENST00000432561 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
CHFR-203ENST00000432561 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
CHFR-203ENST00000432561 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
CHFR-203ENST00000432561 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
CHFR-203ENST00000432561 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
CHFR-203ENST00000432561 MUC5BQ9HC84 5762 aaPredicted RBP3.04□□□□□ -1.92
CHFR-203ENST00000432561 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
CHFR-203ENST00000432561 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
CHFR-203ENST00000432561 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.94
CHFR-203ENST00000432561 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
CHFR-203ENST00000432561 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
CHFR-203ENST00000432561 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
CHFR-203ENST00000432561 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
CHFR-203ENST00000432561 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 65.2 ms