RNA–Protein interactions for RNA: ENST00000431051.5

PSMD1-204, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 1 (best)

Gene PSMD1, Length 2,506 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-204ENST00000431051 KRTAP19-4Q3LI73 84 aa5.06□□□□□ -1.6
PSMD1-204ENST00000431051 KRTAP4-3Q9BYR4 195 aa5.05□□□□□ -1.6
PSMD1-204ENST00000431051 KRTAP2-3P0C7H8 128 aa5.04□□□□□ -1.6
PSMD1-204ENST00000431051 KRTAP2-4Q9BYR9 128 aa5.04□□□□□ -1.6
PSMD1-204ENST00000431051 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
PSMD1-204ENST00000431051 LOC100996750A0A140TA64 210 aa5□□□□□ -1.61
PSMD1-204ENST00000431051 MT1GP13640 62 aa4.94□□□□□ -1.62
PSMD1-204ENST00000431051 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
PSMD1-204ENST00000431051 KRTAP19-3Q7Z4W3 81 aa4.92□□□□□ -1.62
PSMD1-204ENST00000431051 MT1MQ8N339 61 aa4.92□□□□□ -1.62
PSMD1-204ENST00000431051 CRCT1Q9UGL9 99 aa4.89□□□□□ -1.63
PSMD1-204ENST00000431051 MACF1Q9UPN3 7388 aaKnown RBP4.87□□□□□ -1.63
PSMD1-204ENST00000431051 SPRR2FQ96RM1 72 aa4.84□□□□□ -1.63
PSMD1-204ENST00000431051 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
PSMD1-204ENST00000431051 SYNE2Q8WXH0 6885 aaKnown RBP4.75□□□□□ -1.65
PSMD1-204ENST00000431051 KRTAP9-2Q9BYQ4 174 aa4.73□□□□□ -1.65
PSMD1-204ENST00000431051 MDN1Q9NU22 5596 aa4.69□□□□□ -1.66
PSMD1-204ENST00000431051 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
PSMD1-204ENST00000431051 SYNE1Q8NF91 8797 aaKnown RBP4.53□□□□□ -1.68
PSMD1-204ENST00000431051 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
PSMD1-204ENST00000431051 LCE1AQ5T7P2 110 aa4.48□□□□□ -1.69
PSMD1-204ENST00000431051 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
PSMD1-204ENST00000431051 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
PSMD1-204ENST00000431051 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
PSMD1-204ENST00000431051 KRTAP5-9P26371 169 aa4.43□□□□□ -1.7
PSMD1-204ENST00000431051 SPRR2EP22531 72 aa4.4□□□□□ -1.7
PSMD1-204ENST00000431051 SPRR2BP35325 72 aa4.4□□□□□ -1.7
PSMD1-204ENST00000431051 SPRR2AP35326 72 aa4.4□□□□□ -1.7
PSMD1-204ENST00000431051 MT1AP04731 61 aa4.38□□□□□ -1.71
PSMD1-204ENST00000431051 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
PSMD1-204ENST00000431051 LCE3DQ9BYE3 92 aa4.23□□□□□ -1.73
PSMD1-204ENST00000431051 SPRR2DP22532 72 aa4.21□□□□□ -1.74
PSMD1-204ENST00000431051 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.2□□□□□ -1.74
PSMD1-204ENST00000431051 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
PSMD1-204ENST00000431051 LCE3EQ5T5B0 92 aa4.16□□□□□ -1.74
PSMD1-204ENST00000431051 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
PSMD1-204ENST00000431051 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
PSMD1-204ENST00000431051 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
PSMD1-204ENST00000431051 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
PSMD1-204ENST00000431051 PRM1P04553 51 aa3.97□□□□□ -1.77
PSMD1-204ENST00000431051 MT3P25713 68 aa3.94□□□□□ -1.78
PSMD1-204ENST00000431051 NEBP20929 6669 aa3.86□□□□□ -1.79
PSMD1-204ENST00000431051 KRTAP5-4Q6L8H1 288 aa3.82□□□□□ -1.8
PSMD1-204ENST00000431051 KRTAP4-6Q9BYQ5 205 aa3.78□□□□□ -1.8
PSMD1-204ENST00000431051 MT4P47944 62 aa3.76□□□□□ -1.81
PSMD1-204ENST00000431051 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
PSMD1-204ENST00000431051 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
PSMD1-204ENST00000431051 LCE4AQ5TA78 99 aa3.58□□□□□ -1.84
PSMD1-204ENST00000431051 KRTAP20-1Q3LI63 56 aa3.57□□□□□ -1.84
PSMD1-204ENST00000431051 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
PSMD1-204ENST00000431051 LCE1DQ5T752 114 aa3.51□□□□□ -1.85
PSMD1-204ENST00000431051 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
PSMD1-204ENST00000431051 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
PSMD1-204ENST00000431051 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
PSMD1-204ENST00000431051 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
PSMD1-204ENST00000431051 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
PSMD1-204ENST00000431051 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
PSMD1-204ENST00000431051 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
PSMD1-204ENST00000431051 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.91
PSMD1-204ENST00000431051 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.92
PSMD1-204ENST00000431051 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
PSMD1-204ENST00000431051 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
PSMD1-204ENST00000431051 KRTAP4-11Q9BYQ6 195 aa3.03□□□□□ -1.92
PSMD1-204ENST00000431051 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
PSMD1-204ENST00000431051 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
PSMD1-204ENST00000431051 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
PSMD1-204ENST00000431051 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
PSMD1-204ENST00000431051 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.96
PSMD1-204ENST00000431051 GPR98Q8WXG9 6306 aa2.82□□□□□ -1.96
PSMD1-204ENST00000431051 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
PSMD1-204ENST00000431051 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
PSMD1-204ENST00000431051 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
PSMD1-204ENST00000431051 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
PSMD1-204ENST00000431051 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
PSMD1-204ENST00000431051 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
PSMD1-204ENST00000431051 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
PSMD1-204ENST00000431051 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
PSMD1-204ENST00000431051 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 5.4 ms