RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 KRTAP4-8Q9BYQ9 185 aa1.44□□□□□ -2.18
LRRK2-204ENST00000430804 KRTAP9-9Q9BYP9 154 aa1.44□□□□□ -2.18
LRRK2-204ENST00000430804 GPR98Q8WXG9 6306 aa1.44□□□□□ -2.18
LRRK2-204ENST00000430804 HYDINQ4G0P3 5121 aa1.43□□□□□ -2.18
LRRK2-204ENST00000430804 VPS13DQ5THJ4 4388 aa1.43□□□□□ -2.18
LRRK2-204ENST00000430804 MT1EP04732 61 aa1.43□□□□□ -2.18
LRRK2-204ENST00000430804 MT1MQ8N339 61 aa1.43□□□□□ -2.18
LRRK2-204ENST00000430804 DYNC2H1Q8NCM8 4307 aaKnown RBP1.43□□□□□ -2.18
LRRK2-204ENST00000430804 FAT2Q9NYQ8 4349 aa1.43□□□□□ -2.18
LRRK2-204ENST00000430804 RYR2Q92736 4967 aa1.42□□□□□ -2.18
LRRK2-204ENST00000430804 LCE1CQ5T751 118 aa1.42□□□□□ -2.18
LRRK2-204ENST00000430804 LCE1EQ5T753 118 aa1.42□□□□□ -2.18
LRRK2-204ENST00000430804 LCE1FQ5T754 118 aa1.42□□□□□ -2.18
LRRK2-204ENST00000430804 KMT2AQ03164 3969 aa1.41□□□□□ -2.18
LRRK2-204ENST00000430804 FRAS1Q86XX4 4008 aa1.41□□□□□ -2.18
LRRK2-204ENST00000430804 PKD1P98161 4303 aa1.39□□□□□ -2.19
LRRK2-204ENST00000430804 PKHD1P08F94 4074 aa1.38□□□□□ -2.19
LRRK2-204ENST00000430804 KRTAP4-12Q9BQ66 201 aa1.38□□□□□ -2.19
LRRK2-204ENST00000430804 MT1AP04731 61 aa1.37□□□□□ -2.19
LRRK2-204ENST00000430804 KRTAP4-9Q9BYQ8 210 aa1.37□□□□□ -2.19
LRRK2-204ENST00000430804 DNAH6Q9C0G6 4158 aa1.35□□□□□ -2.19
LRRK2-204ENST00000430804 KIAA1109Q2LD37 5005 aa1.35□□□□□ -2.19
LRRK2-204ENST00000430804 VPS13BQ7Z7G8 4022 aa1.34□□□□□ -2.2
LRRK2-204ENST00000430804 HECTD4Q9Y4D8 3996 aa1.34□□□□□ -2.2
LRRK2-204ENST00000430804 NEBP20929 6669 aa1.33□□□□□ -2.2
LRRK2-204ENST00000430804 KRTAP4-2Q9BYR5 136 aa1.33□□□□□ -2.2
LRRK2-204ENST00000430804 KRTAP9-4Q9BYQ2 154 aa1.32□□□□□ -2.2
LRRK2-204ENST00000430804 HMCN2Q8NDA2 5059 aa1.29□□□□□ -2.2
LRRK2-204ENST00000430804 FSIP2Q5CZC0 6907 aa1.29□□□□□ -2.2
LRRK2-204ENST00000430804 ABCA13Q86UQ4 5058 aa1.29□□□□□ -2.2
LRRK2-204ENST00000430804 KRTAP19-2Q3LHN2 52 aa1.29□□□□□ -2.2
LRRK2-204ENST00000430804 KRTAP4-7Q9BYR0 210 aa1.28□□□□□ -2.2
LRRK2-204ENST00000430804 KRTAP5-3Q6L8H2 238 aa1.27□□□□□ -2.21
LRRK2-204ENST00000430804 MACF1Q9UPN3 7388 aaKnown RBP1.26□□□□□ -2.21
LRRK2-204ENST00000430804 UBR4Q5T4S7 5183 aa1.26□□□□□ -2.21
LRRK2-204ENST00000430804 KRTAP6-2Q3LI66 62 aa1.23□□□□□ -2.21
LRRK2-204ENST00000430804 RNF213Q63HN8 5207 aa1.21□□□□□ -2.22
LRRK2-204ENST00000430804 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
LRRK2-204ENST00000430804 TNXBP22105 4242 aa1.21□□□□□ -2.22
LRRK2-204ENST00000430804 KRTAP4-3Q9BYR4 195 aa1.21□□□□□ -2.22
LRRK2-204ENST00000430804 FAT4Q6V0I7 4981 aa1.2□□□□□ -2.22
LRRK2-204ENST00000430804 PRM1P04553 51 aa1.19□□□□□ -2.22
LRRK2-204ENST00000430804 KRTAP19-7Q3SYF9 63 aa1.19□□□□□ -2.22
LRRK2-204ENST00000430804 MUC17Q685J3 4493 aa1.18□□□□□ -2.22
LRRK2-204ENST00000430804 KRTAP5-9P26371 169 aa1.18□□□□□ -2.22
LRRK2-204ENST00000430804 HMCN1Q96RW7 5635 aa1.17□□□□□ -2.22
LRRK2-204ENST00000430804 LPAP08519 4548 aa1.16□□□□□ -2.22
LRRK2-204ENST00000430804 MUC2Q02817 5179 aa1.16□□□□□ -2.22
LRRK2-204ENST00000430804 KRTAP6-1Q3LI64 71 aa1.14□□□□□ -2.23
LRRK2-204ENST00000430804 KRTAP5-4Q6L8H1 288 aa1.12□□□□□ -2.23
LRRK2-204ENST00000430804 AHNAK2Q8IVF2 5795 aa1.11□□□□□ -2.23
LRRK2-204ENST00000430804 KRTAP20-2Q3LI61 65 aa1.11□□□□□ -2.23
LRRK2-204ENST00000430804 OBSCNQ5VST9 7968 aa1.1□□□□□ -2.23
LRRK2-204ENST00000430804 FLGP20930 4061 aaPredicted RBP1.1□□□□□ -2.23
LRRK2-204ENST00000430804 SSPOA2VEC9 5147 aa1.08□□□□□ -2.24
LRRK2-204ENST00000430804 KRTAP4-11Q9BYQ6 195 aa1.08□□□□□ -2.24
LRRK2-204ENST00000430804 KMT2DO14686 5537 aa1.08□□□□□ -2.24
LRRK2-204ENST00000430804 FCGBPQ9Y6R7 5405 aaPredicted RBP1.06□□□□□ -2.24
LRRK2-204ENST00000430804 MUC12Q9UKN1 5478 aa1.05□□□□□ -2.24
LRRK2-204ENST00000430804 MDN1Q9NU22 5596 aa1.05□□□□□ -2.24
LRRK2-204ENST00000430804 MUC5BQ9HC84 5762 aaPredicted RBP1.02□□□□□ -2.25
LRRK2-204ENST00000430804 USH2AO75445 5202 aa1.02□□□□□ -2.25
LRRK2-204ENST00000430804 PHGR1C9JFL3 82 aa0.96□□□□□ -2.26
LRRK2-204ENST00000430804 MUC5ACP98088 5654 aa0.95□□□□□ -2.26
LRRK2-204ENST00000430804 KRTAP5-5Q701N2 237 aaPredicted RBP0.95□□□□□ -2.26
LRRK2-204ENST00000430804 DSTQ03001 7570 aaKnown RBP0.94□□□□□ -2.26
LRRK2-204ENST00000430804 AHNAKQ09666 5890 aaKnown RBP0.94□□□□□ -2.26
LRRK2-204ENST00000430804 KRTAP5-8O75690 187 aa0.93□□□□□ -2.26
LRRK2-204ENST00000430804 MUC19Q7Z5P9 8384 aa0.91□□□□□ -2.26
LRRK2-204ENST00000430804 KRTAP9-6A8MVA2 160 aa0.91□□□□□ -2.26
LRRK2-204ENST00000430804 KRTAP5-1Q6L8H4 278 aa0.9□□□□□ -2.27
LRRK2-204ENST00000430804 KRTAP4-4Q9BYR3 166 aa0.9□□□□□ -2.27
LRRK2-204ENST00000430804 KRTAP5-11Q6L8G4 156 aa0.86□□□□□ -2.27
LRRK2-204ENST00000430804 KRTAP5-7Q6L8G8 165 aa0.81□□□□□ -2.28
LRRK2-204ENST00000430804 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
LRRK2-204ENST00000430804 KRTAP5-10Q6L8G5 202 aa0.73□□□□□ -2.29
LRRK2-204ENST00000430804 KRTAP21-2Q3LI59 83 aa0.7□□□□□ -2.3
LRRK2-204ENST00000430804 MUC16Q8WXI7 14507 aa0.46□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 49.3 ms