RNA–Protein interactions for RNA: ENST00000429644.6

GBE1-201, Transcript of 1,4-alpha-glucan branching enzyme 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GBE1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBE1-201ENST00000429644 LOC100996750A0A140TA64 210 aa4.2□□□□□ -1.74
GBE1-201ENST00000429644 MT1GP13640 62 aa4.18□□□□□ -1.74
GBE1-201ENST00000429644 MT1LQ93083 61 aa4.16□□□□□ -1.74
GBE1-201ENST00000429644 MT1EP04732 61 aa4.15□□□□□ -1.75
GBE1-201ENST00000429644 SPRR2FQ96RM1 72 aa4.09□□□□□ -1.75
GBE1-201ENST00000429644 SYNE2Q8WXH0 6885 aaKnown RBP4.05□□□□□ -1.76
GBE1-201ENST00000429644 LCE3BQ5TA77 95 aa3.97□□□□□ -1.77
GBE1-201ENST00000429644 KRTAP2-3P0C7H8 128 aa3.93□□□□□ -1.78
GBE1-201ENST00000429644 KRTAP19-6Q3LI70 58 aa3.93□□□□□ -1.78
GBE1-201ENST00000429644 KRTAP2-4Q9BYR9 128 aa3.93□□□□□ -1.78
GBE1-201ENST00000429644 KRTAP2-1Q9BYU5 128 aa3.93□□□□□ -1.78
GBE1-201ENST00000429644 LCE2DQ5TA82 110 aaPredicted RBP3.93□□□□□ -1.78
GBE1-201ENST00000429644 KRTAP19-3Q7Z4W3 81 aa3.91□□□□□ -1.78
GBE1-201ENST00000429644 MT1MQ8N339 61 aa3.91□□□□□ -1.78
GBE1-201ENST00000429644 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
GBE1-201ENST00000429644 KRTAP12-4P60329 112 aa3.9□□□□□ -1.79
GBE1-201ENST00000429644 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
GBE1-201ENST00000429644 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
GBE1-201ENST00000429644 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
GBE1-201ENST00000429644 SPRR2EP22531 72 aa3.66□□□□□ -1.82
GBE1-201ENST00000429644 SPRR2BP35325 72 aa3.66□□□□□ -1.82
GBE1-201ENST00000429644 SPRR2AP35326 72 aa3.66□□□□□ -1.82
GBE1-201ENST00000429644 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.83
GBE1-201ENST00000429644 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
GBE1-201ENST00000429644 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
GBE1-201ENST00000429644 KRTAP9-2Q9BYQ4 174 aa3.57□□□□□ -1.84
GBE1-201ENST00000429644 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
GBE1-201ENST00000429644 LCE1AQ5T7P2 110 aa3.49□□□□□ -1.85
GBE1-201ENST00000429644 KRTAP9-7A8MTY7 169 aa3.47□□□□□ -1.85
GBE1-201ENST00000429644 SPRR2DP22532 72 aa3.47□□□□□ -1.85
GBE1-201ENST00000429644 PRM1P04553 51 aa3.45□□□□□ -1.86
GBE1-201ENST00000429644 MT1AP04731 61 aa3.44□□□□□ -1.86
GBE1-201ENST00000429644 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
GBE1-201ENST00000429644 KRTAP2-2Q9BYT5 123 aa3.4□□□□□ -1.87
GBE1-201ENST00000429644 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
GBE1-201ENST00000429644 KRTAP6-3Q3LI67 103 aa3.32□□□□□ -1.88
GBE1-201ENST00000429644 MT4P47944 62 aa3.27□□□□□ -1.89
GBE1-201ENST00000429644 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
GBE1-201ENST00000429644 LCE1DQ5T752 114 aa3.23□□□□□ -1.89
GBE1-201ENST00000429644 KRTAP9-6A0A140TA67 174 aa3.21□□□□□ -1.9
GBE1-201ENST00000429644 MT3P25713 68 aa3.21□□□□□ -1.9
GBE1-201ENST00000429644 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
GBE1-201ENST00000429644 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
GBE1-201ENST00000429644 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.16□□□□□ -1.9
GBE1-201ENST00000429644 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
GBE1-201ENST00000429644 KRTAP4-6Q9BYQ5 205 aa3.07□□□□□ -1.92
GBE1-201ENST00000429644 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
GBE1-201ENST00000429644 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
GBE1-201ENST00000429644 NEBP20929 6669 aa2.95□□□□□ -1.94
GBE1-201ENST00000429644 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
GBE1-201ENST00000429644 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
GBE1-201ENST00000429644 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
GBE1-201ENST00000429644 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
GBE1-201ENST00000429644 KRTAP4-11Q9BYQ6 195 aa2.69□□□□□ -1.98
GBE1-201ENST00000429644 LCE4AQ5TA78 99 aa2.69□□□□□ -1.98
GBE1-201ENST00000429644 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
GBE1-201ENST00000429644 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
GBE1-201ENST00000429644 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
GBE1-201ENST00000429644 KRTAP5-3Q6L8H2 238 aa2.48□□□□□ -2.01
GBE1-201ENST00000429644 KRTAP9-9Q9BYP9 154 aa2.4□□□□□ -2.02
GBE1-201ENST00000429644 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
GBE1-201ENST00000429644 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
GBE1-201ENST00000429644 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
GBE1-201ENST00000429644 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
GBE1-201ENST00000429644 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.03
GBE1-201ENST00000429644 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
GBE1-201ENST00000429644 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
GBE1-201ENST00000429644 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
GBE1-201ENST00000429644 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
GBE1-201ENST00000429644 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
GBE1-201ENST00000429644 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
GBE1-201ENST00000429644 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
GBE1-201ENST00000429644 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
GBE1-201ENST00000429644 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
GBE1-201ENST00000429644 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
GBE1-201ENST00000429644 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
GBE1-201ENST00000429644 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 8.9 ms