RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 MT1EP04732 61 aa5.1□□□□□ -1.59
CACTIN-203ENST00000429344 SPRR2FQ96RM1 72 aa5.08□□□□□ -1.6
CACTIN-203ENST00000429344 MT1LQ93083 61 aa5.06□□□□□ -1.6
CACTIN-203ENST00000429344 SYNE2Q8WXH0 6885 aaKnown RBP5.04□□□□□ -1.6
CACTIN-203ENST00000429344 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
CACTIN-203ENST00000429344 LCE2DQ5TA82 110 aaPredicted RBP5.02□□□□□ -1.61
CACTIN-203ENST00000429344 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
CACTIN-203ENST00000429344 KRTAP2-3P0C7H8 128 aa4.98□□□□□ -1.61
CACTIN-203ENST00000429344 KRTAP2-4Q9BYR9 128 aa4.98□□□□□ -1.61
CACTIN-203ENST00000429344 KRTAP2-1Q9BYU5 128 aa4.98□□□□□ -1.61
CACTIN-203ENST00000429344 MT1GP13640 62 aa4.95□□□□□ -1.62
CACTIN-203ENST00000429344 KRTAP9-2Q9BYQ4 174 aa4.95□□□□□ -1.62
CACTIN-203ENST00000429344 MACF1Q9UPN3 7388 aaKnown RBP4.93□□□□□ -1.62
CACTIN-203ENST00000429344 KRTAP19-3Q7Z4W3 81 aa4.87□□□□□ -1.63
CACTIN-203ENST00000429344 KRTAP12-4P60329 112 aa4.86□□□□□ -1.63
CACTIN-203ENST00000429344 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
CACTIN-203ENST00000429344 MT1MQ8N339 61 aa4.81□□□□□ -1.64
CACTIN-203ENST00000429344 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
CACTIN-203ENST00000429344 SPRR2EP22531 72 aa4.67□□□□□ -1.66
CACTIN-203ENST00000429344 SPRR2BP35325 72 aa4.67□□□□□ -1.66
CACTIN-203ENST00000429344 SPRR2AP35326 72 aa4.67□□□□□ -1.66
CACTIN-203ENST00000429344 KRTAP4-9Q9BYQ8 210 aa4.66□□□□□ -1.66
CACTIN-203ENST00000429344 MDN1Q9NU22 5596 aa4.66□□□□□ -1.66
CACTIN-203ENST00000429344 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
CACTIN-203ENST00000429344 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
CACTIN-203ENST00000429344 SPRR2DP22532 72 aa4.47□□□□□ -1.69
CACTIN-203ENST00000429344 KRTAP9-6A0A140TA67 174 aa4.41□□□□□ -1.7
CACTIN-203ENST00000429344 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.4□□□□□ -1.71
CACTIN-203ENST00000429344 KRTAP5-9P26371 169 aa4.39□□□□□ -1.71
CACTIN-203ENST00000429344 PRM1P04553 51 aa4.35□□□□□ -1.71
CACTIN-203ENST00000429344 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
CACTIN-203ENST00000429344 LCE3DQ9BYE3 92 aa4.34□□□□□ -1.72
CACTIN-203ENST00000429344 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
CACTIN-203ENST00000429344 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
CACTIN-203ENST00000429344 MT1AP04731 61 aa4.26□□□□□ -1.73
CACTIN-203ENST00000429344 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
CACTIN-203ENST00000429344 MT4P47944 62 aa4.09□□□□□ -1.75
CACTIN-203ENST00000429344 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
CACTIN-203ENST00000429344 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
CACTIN-203ENST00000429344 KRTAP9-4Q9BYQ2 154 aa4.01□□□□□ -1.77
CACTIN-203ENST00000429344 MUC19Q7Z5P9 8384 aa3.99□□□□□ -1.77
CACTIN-203ENST00000429344 NEBP20929 6669 aa3.97□□□□□ -1.77
CACTIN-203ENST00000429344 MT3P25713 68 aa3.96□□□□□ -1.78
CACTIN-203ENST00000429344 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
CACTIN-203ENST00000429344 KRTAP4-6Q9BYQ5 205 aa3.83□□□□□ -1.8
CACTIN-203ENST00000429344 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
CACTIN-203ENST00000429344 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
CACTIN-203ENST00000429344 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
CACTIN-203ENST00000429344 KRTAP20-1Q3LI63 56 aa3.69□□□□□ -1.82
CACTIN-203ENST00000429344 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
CACTIN-203ENST00000429344 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
CACTIN-203ENST00000429344 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
CACTIN-203ENST00000429344 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
CACTIN-203ENST00000429344 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
CACTIN-203ENST00000429344 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
CACTIN-203ENST00000429344 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
CACTIN-203ENST00000429344 KRTAP5-3Q6L8H2 238 aa3.32□□□□□ -1.88
CACTIN-203ENST00000429344 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
CACTIN-203ENST00000429344 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
CACTIN-203ENST00000429344 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
CACTIN-203ENST00000429344 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
CACTIN-203ENST00000429344 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
CACTIN-203ENST00000429344 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
CACTIN-203ENST00000429344 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
CACTIN-203ENST00000429344 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
CACTIN-203ENST00000429344 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
CACTIN-203ENST00000429344 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
CACTIN-203ENST00000429344 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
CACTIN-203ENST00000429344 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
CACTIN-203ENST00000429344 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
CACTIN-203ENST00000429344 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
CACTIN-203ENST00000429344 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -2
CACTIN-203ENST00000429344 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2.01
CACTIN-203ENST00000429344 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
CACTIN-203ENST00000429344 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.03
CACTIN-203ENST00000429344 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
CACTIN-203ENST00000429344 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms