RNA–Protein interactions for RNA: ENST00000428797.7

GABRA1-203, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-203ENST00000428797 KRTAP19-6Q3LI70 58 aa3.06□□□□□ -1.92
GABRA1-203ENST00000428797 MT1MQ8N339 61 aa3.01□□□□□ -1.93
GABRA1-203ENST00000428797 LCE3BQ5TA77 95 aa3□□□□□ -1.93
GABRA1-203ENST00000428797 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
GABRA1-203ENST00000428797 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
GABRA1-203ENST00000428797 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
GABRA1-203ENST00000428797 LOC100996750A0A140TA64 210 aa2.9□□□□□ -1.94
GABRA1-203ENST00000428797 SPRR2EP22531 72 aa2.89□□□□□ -1.95
GABRA1-203ENST00000428797 SPRR2BP35325 72 aa2.89□□□□□ -1.95
GABRA1-203ENST00000428797 SPRR2AP35326 72 aa2.89□□□□□ -1.95
GABRA1-203ENST00000428797 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
GABRA1-203ENST00000428797 MT1AP04731 61 aa2.79□□□□□ -1.96
GABRA1-203ENST00000428797 FSIP2Q5CZC0 6907 aa2.79□□□□□ -1.96
GABRA1-203ENST00000428797 SPRR2DP22532 72 aa2.79□□□□□ -1.96
GABRA1-203ENST00000428797 USH2AO75445 5202 aa2.77□□□□□ -1.97
GABRA1-203ENST00000428797 LCE5AQ5TCM9 118 aa2.76□□□□□ -1.97
GABRA1-203ENST00000428797 MT3P25713 68 aa2.72□□□□□ -1.97
GABRA1-203ENST00000428797 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
GABRA1-203ENST00000428797 PRM1P04553 51 aa2.7□□□□□ -1.98
GABRA1-203ENST00000428797 KMT2DO14686 5537 aa2.67□□□□□ -1.98
GABRA1-203ENST00000428797 KRTAP6-1Q3LI64 71 aa2.65□□□□□ -1.98
GABRA1-203ENST00000428797 KRTAP4-9Q9BYQ8 210 aa2.65□□□□□ -1.98
GABRA1-203ENST00000428797 LCE1AQ5T7P2 110 aa2.65□□□□□ -1.99
GABRA1-203ENST00000428797 KRTAP9-2Q9BYQ4 174 aa2.6□□□□□ -1.99
GABRA1-203ENST00000428797 KRTAP9-4Q9BYQ2 154 aa2.58□□□□□ -2
GABRA1-203ENST00000428797 FCGBPQ9Y6R7 5405 aaPredicted RBP2.53□□□□□ -2
GABRA1-203ENST00000428797 SSPOA2VEC9 5147 aa2.53□□□□□ -2
GABRA1-203ENST00000428797 KRTAP6-2Q3LI66 62 aa2.5□□□□□ -2.01
GABRA1-203ENST00000428797 KRTAP9-6A0A140TA67 174 aa2.5□□□□□ -2.01
GABRA1-203ENST00000428797 KRTAP9-7A8MTY7 169 aa2.47□□□□□ -2.01
GABRA1-203ENST00000428797 KRTAP4-6Q9BYQ5 205 aa2.47□□□□□ -2.01
GABRA1-203ENST00000428797 KRTAP6-3Q3LI67 103 aa2.47□□□□□ -2.01
GABRA1-203ENST00000428797 MUC12Q9UKN1 5478 aa2.45□□□□□ -2.02
GABRA1-203ENST00000428797 KRTAP5-9P26371 169 aa2.45□□□□□ -2.02
GABRA1-203ENST00000428797 DSTQ03001 7570 aaKnown RBP2.45□□□□□ -2.02
GABRA1-203ENST00000428797 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
GABRA1-203ENST00000428797 SYNE2Q8WXH0 6885 aaKnown RBP2.42□□□□□ -2.02
GABRA1-203ENST00000428797 MT4P47944 62 aa2.4□□□□□ -2.02
GABRA1-203ENST00000428797 LCE4AQ5TA78 99 aa2.35□□□□□ -2.03
GABRA1-203ENST00000428797 MACF1Q9UPN3 7388 aaKnown RBP2.34□□□□□ -2.04
GABRA1-203ENST00000428797 LCE1DQ5T752 114 aa2.33□□□□□ -2.04
GABRA1-203ENST00000428797 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.31□□□□□ -2.04
GABRA1-203ENST00000428797 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
GABRA1-203ENST00000428797 KRTAP2-2Q9BYT5 123 aa2.29□□□□□ -2.04
GABRA1-203ENST00000428797 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
GABRA1-203ENST00000428797 MDN1Q9NU22 5596 aa2.16□□□□□ -2.06
GABRA1-203ENST00000428797 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
GABRA1-203ENST00000428797 KRTAP20-1Q3LI63 56 aa2.12□□□□□ -2.07
GABRA1-203ENST00000428797 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
GABRA1-203ENST00000428797 NEBP20929 6669 aa2.03□□□□□ -2.09
GABRA1-203ENST00000428797 LCE1EQ5T753 118 aa2□□□□□ -2.09
GABRA1-203ENST00000428797 KRTAP4-11Q9BYQ6 195 aa1.98□□□□□ -2.09
GABRA1-203ENST00000428797 KRTAP4-12Q9BQ66 201 aa1.97□□□□□ -2.09
GABRA1-203ENST00000428797 KRTAP9-9Q9BYP9 154 aa1.92□□□□□ -2.1
GABRA1-203ENST00000428797 KRTAP4-2Q9BYR5 136 aa1.91□□□□□ -2.1
GABRA1-203ENST00000428797 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.11
GABRA1-203ENST00000428797 KRTAP5-3Q6L8H2 238 aa1.87□□□□□ -2.11
GABRA1-203ENST00000428797 GPR98Q8WXG9 6306 aa1.85□□□□□ -2.11
GABRA1-203ENST00000428797 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
GABRA1-203ENST00000428797 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
GABRA1-203ENST00000428797 HMCN1Q96RW7 5635 aa1.79□□□□□ -2.12
GABRA1-203ENST00000428797 KRTAP5-10Q6L8G5 202 aa1.79□□□□□ -2.12
GABRA1-203ENST00000428797 MUC5ACP98088 5654 aa1.78□□□□□ -2.12
GABRA1-203ENST00000428797 LCE1FQ5T754 118 aa1.74□□□□□ -2.13
GABRA1-203ENST00000428797 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
GABRA1-203ENST00000428797 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
GABRA1-203ENST00000428797 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.66□□□□□ -2.14
GABRA1-203ENST00000428797 KRTAP5-1Q6L8H4 278 aa1.64□□□□□ -2.15
GABRA1-203ENST00000428797 KRTAP5-8O75690 187 aa1.57□□□□□ -2.16
GABRA1-203ENST00000428797 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
GABRA1-203ENST00000428797 KRTAP5-11Q6L8G4 156 aa1.54□□□□□ -2.16
GABRA1-203ENST00000428797 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
GABRA1-203ENST00000428797 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
GABRA1-203ENST00000428797 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
GABRA1-203ENST00000428797 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
GABRA1-203ENST00000428797 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
GABRA1-203ENST00000428797 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 98.9 ms