RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.7
COL12A1-205ENST00000425443 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
COL12A1-205ENST00000425443 KRTAP2-3P0C7H8 128 aa4.42□□□□□ -1.7
COL12A1-205ENST00000425443 KRTAP2-4Q9BYR9 128 aa4.42□□□□□ -1.7
COL12A1-205ENST00000425443 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
COL12A1-205ENST00000425443 CRCT1Q9UGL9 99 aa4.38□□□□□ -1.71
COL12A1-205ENST00000425443 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
COL12A1-205ENST00000425443 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
COL12A1-205ENST00000425443 LOC100996750A0A140TA64 210 aa4.35□□□□□ -1.71
COL12A1-205ENST00000425443 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
COL12A1-205ENST00000425443 MT1GP13640 62 aa4.28□□□□□ -1.72
COL12A1-205ENST00000425443 KRTAP9-2Q9BYQ4 174 aa4.28□□□□□ -1.72
COL12A1-205ENST00000425443 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
COL12A1-205ENST00000425443 SPRR2FQ96RM1 72 aa4.21□□□□□ -1.73
COL12A1-205ENST00000425443 MT1MQ8N339 61 aa4.21□□□□□ -1.74
COL12A1-205ENST00000425443 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
COL12A1-205ENST00000425443 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
COL12A1-205ENST00000425443 MACF1Q9UPN3 7388 aaKnown RBP4.17□□□□□ -1.74
COL12A1-205ENST00000425443 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
COL12A1-205ENST00000425443 SYNE2Q8WXH0 6885 aaKnown RBP4.12□□□□□ -1.75
COL12A1-205ENST00000425443 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
COL12A1-205ENST00000425443 KRTAP6-3Q3LI67 103 aa4.09□□□□□ -1.75
COL12A1-205ENST00000425443 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
COL12A1-205ENST00000425443 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
COL12A1-205ENST00000425443 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
COL12A1-205ENST00000425443 KRTAP9-6A0A140TA67 174 aa4.01□□□□□ -1.77
COL12A1-205ENST00000425443 LCE3BQ5TA77 95 aa4□□□□□ -1.77
COL12A1-205ENST00000425443 LCE1DQ5T752 114 aa3.9□□□□□ -1.79
COL12A1-205ENST00000425443 SPRR2EP22531 72 aa3.86□□□□□ -1.79
COL12A1-205ENST00000425443 SPRR2BP35325 72 aa3.86□□□□□ -1.79
COL12A1-205ENST00000425443 SPRR2AP35326 72 aa3.86□□□□□ -1.79
COL12A1-205ENST00000425443 PRM1P04553 51 aa3.82□□□□□ -1.8
COL12A1-205ENST00000425443 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
COL12A1-205ENST00000425443 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.81□□□□□ -1.8
COL12A1-205ENST00000425443 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
COL12A1-205ENST00000425443 KRTAP4-6Q9BYQ5 205 aa3.79□□□□□ -1.8
COL12A1-205ENST00000425443 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
COL12A1-205ENST00000425443 MT1AP04731 61 aa3.76□□□□□ -1.81
COL12A1-205ENST00000425443 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
COL12A1-205ENST00000425443 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
COL12A1-205ENST00000425443 SPRR2DP22532 72 aa3.69□□□□□ -1.82
COL12A1-205ENST00000425443 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
COL12A1-205ENST00000425443 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.82
COL12A1-205ENST00000425443 KRTAP9-4Q9BYQ2 154 aa3.61□□□□□ -1.83
COL12A1-205ENST00000425443 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.84
COL12A1-205ENST00000425443 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
COL12A1-205ENST00000425443 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
COL12A1-205ENST00000425443 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
COL12A1-205ENST00000425443 NEBP20929 6669 aa3.45□□□□□ -1.86
COL12A1-205ENST00000425443 MT3P25713 68 aa3.43□□□□□ -1.86
COL12A1-205ENST00000425443 MT4P47944 62 aa3.28□□□□□ -1.88
COL12A1-205ENST00000425443 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
COL12A1-205ENST00000425443 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
COL12A1-205ENST00000425443 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
COL12A1-205ENST00000425443 KRTAP5-3Q6L8H2 238 aa3.08□□□□□ -1.92
COL12A1-205ENST00000425443 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
COL12A1-205ENST00000425443 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
COL12A1-205ENST00000425443 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
COL12A1-205ENST00000425443 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
COL12A1-205ENST00000425443 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
COL12A1-205ENST00000425443 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.96
COL12A1-205ENST00000425443 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.96
COL12A1-205ENST00000425443 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
COL12A1-205ENST00000425443 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
COL12A1-205ENST00000425443 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
COL12A1-205ENST00000425443 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
COL12A1-205ENST00000425443 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
COL12A1-205ENST00000425443 KRTAP5-8O75690 187 aa2.46□□□□□ -2.01
COL12A1-205ENST00000425443 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
COL12A1-205ENST00000425443 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
COL12A1-205ENST00000425443 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
COL12A1-205ENST00000425443 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
COL12A1-205ENST00000425443 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
COL12A1-205ENST00000425443 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
COL12A1-205ENST00000425443 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
COL12A1-205ENST00000425443 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
COL12A1-205ENST00000425443 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
COL12A1-205ENST00000425443 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 161.2 ms