RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 PLAC4Q8WY50 150 aa1.47□□□□□ -2.17
HDAC9-209ENST00000425071 SPRR2GQ9BYE4 73 aa1.47□□□□□ -2.17
HDAC9-209ENST00000425071 PRO0628Q9UI54 55 aa1.47□□□□□ -2.17
HDAC9-209ENST00000425071 RPS28P62857 69 aaKnown RBP1.46□□□□□ -2.18
HDAC9-209ENST00000425071 KRTAP25-1Q3LHN0 102 aa1.46□□□□□ -2.18
HDAC9-209ENST00000425071 Q5VV11 94 aa1.46□□□□□ -2.18
HDAC9-209ENST00000425071 A0A1B0GU33 70 aa1.45□□□□□ -2.18
HDAC9-209ENST00000425071 CYSTM1Q9H1C7 97 aa1.45□□□□□ -2.18
HDAC9-209ENST00000425071 CRCT1Q9UGL9 99 aa1.45□□□□□ -2.18
HDAC9-209ENST00000425071 A6NN06 94 aa1.44□□□□□ -2.18
HDAC9-209ENST00000425071 K7ERS5 55 aa1.44□□□□□ -2.18
HDAC9-209ENST00000425071 PRO2289Q9P1D8 64 aa1.44□□□□□ -2.18
HDAC9-209ENST00000425071 LINC01558Q9Y6Z2 57 aa1.44□□□□□ -2.18
HDAC9-209ENST00000425071 UQCR11O14957 56 aa1.43□□□□□ -2.18
HDAC9-209ENST00000425071 KRTAP19-8Q3LI54 63 aa1.43□□□□□ -2.18
HDAC9-209ENST00000425071 KRTAP13-4Q3LI77 160 aa1.43□□□□□ -2.18
HDAC9-209ENST00000425071 Q1T7F1 81 aa1.42□□□□□ -2.18
HDAC9-209ENST00000425071 LINC01554Q52M75 96 aa1.42□□□□□ -2.18
HDAC9-209ENST00000425071 FSIP2Q5CZC0 6907 aa1.41□□□□□ -2.18
HDAC9-209ENST00000425071 KRTAP12-1P59990 96 aa1.41□□□□□ -2.18
HDAC9-209ENST00000425071 KRTAP19-6Q3LI70 58 aa1.41□□□□□ -2.18
HDAC9-209ENST00000425071 USH2AO75445 5202 aa1.38□□□□□ -2.19
HDAC9-209ENST00000425071 MT1BP07438 61 aa1.38□□□□□ -2.19
HDAC9-209ENST00000425071 A0A0D9SG42 100 aa1.37□□□□□ -2.19
HDAC9-209ENST00000425071 A6NED7 52 aa1.37□□□□□ -2.19
HDAC9-209ENST00000425071 MIR22HGQ0VDD5 57 aa1.37□□□□□ -2.19
HDAC9-209ENST00000425071 SPATA8Q6RVD6 105 aa1.37□□□□□ -2.19
HDAC9-209ENST00000425071 SSPOA2VEC9 5147 aa1.34□□□□□ -2.19
HDAC9-209ENST00000425071 FCGBPQ9Y6R7 5405 aaPredicted RBP1.33□□□□□ -2.2
HDAC9-209ENST00000425071 MACF1Q9UPN3 7388 aaKnown RBP1.32□□□□□ -2.2
HDAC9-209ENST00000425071 TNP1P09430 55 aa1.32□□□□□ -2.2
HDAC9-209ENST00000425071 MT1XP80297 61 aa1.32□□□□□ -2.2
HDAC9-209ENST00000425071 CDC42SE1Q9NRR8 79 aa1.31□□□□□ -2.2
HDAC9-209ENST00000425071 KRTAP8-1Q8IUC2 63 aa1.28□□□□□ -2.2
HDAC9-209ENST00000425071 ROMO1P60602 79 aa1.27□□□□□ -2.21
HDAC9-209ENST00000425071 C10orf95Q9H7T3 257 aa1.27□□□□□ -2.21
HDAC9-209ENST00000425071 BRK1Q8WUW1 75 aa1.25□□□□□ -2.21
HDAC9-209ENST00000425071 SYNE2Q8WXH0 6885 aaKnown RBP1.25□□□□□ -2.21
HDAC9-209ENST00000425071 SPRR2FQ96RM1 72 aa1.24□□□□□ -2.21
HDAC9-209ENST00000425071 PMAIP1Q13794 54 aa1.22□□□□□ -2.21
HDAC9-209ENST00000425071 KMT2DO14686 5537 aa1.22□□□□□ -2.21
HDAC9-209ENST00000425071 MDN1Q9NU22 5596 aa1.2□□□□□ -2.22
HDAC9-209ENST00000425071 MUC12Q9UKN1 5478 aa1.19□□□□□ -2.22
HDAC9-209ENST00000425071 MT1GP13640 62 aa1.19□□□□□ -2.22
HDAC9-209ENST00000425071 SPRR2EP22531 72 aa1.19□□□□□ -2.22
HDAC9-209ENST00000425071 SPRR2BP35325 72 aa1.19□□□□□ -2.22
HDAC9-209ENST00000425071 SPRR2AP35326 72 aa1.19□□□□□ -2.22
HDAC9-209ENST00000425071 KRTAP19-5Q3LI72 72 aa1.18□□□□□ -2.22
HDAC9-209ENST00000425071 MT1EP04732 61 aa1.17□□□□□ -2.22
HDAC9-209ENST00000425071 KRTAP2-3P0C7H8 128 aa1.17□□□□□ -2.22
HDAC9-209ENST00000425071 KRTAP19-7Q3SYF9 63 aa1.17□□□□□ -2.22
HDAC9-209ENST00000425071 KRTAP19-3Q7Z4W3 81 aa1.17□□□□□ -2.22
HDAC9-209ENST00000425071 KRTAP2-4Q9BYR9 128 aa1.17□□□□□ -2.22
HDAC9-209ENST00000425071 NEBP20929 6669 aa1.16□□□□□ -2.22
HDAC9-209ENST00000425071 SPRR2DP22532 72 aa1.16□□□□□ -2.22
HDAC9-209ENST00000425071 KRTAP20-1Q3LI63 56 aa1.15□□□□□ -2.23
HDAC9-209ENST00000425071 KTN1-AS1Q86SY8 53 aa1.15□□□□□ -2.23
HDAC9-209ENST00000425071 DSTQ03001 7570 aaKnown RBP1.14□□□□□ -2.23
HDAC9-209ENST00000425071 KRTAP2-1Q9BYU5 128 aa1.14□□□□□ -2.23
HDAC9-209ENST00000425071 MT1LQ93083 61 aa1.13□□□□□ -2.23
HDAC9-209ENST00000425071 MT1MQ8N339 61 aa1.11□□□□□ -2.23
HDAC9-209ENST00000425071 SYNE1Q8NF91 8797 aaKnown RBP0.99□□□□□ -2.25
HDAC9-209ENST00000425071 MT1AP04731 61 aa0.98□□□□□ -2.25
HDAC9-209ENST00000425071 MT4P47944 62 aa0.98□□□□□ -2.25
HDAC9-209ENST00000425071 KRTAP20-2Q3LI61 65 aa0.95□□□□□ -2.26
HDAC9-209ENST00000425071 KRTAP6-1Q3LI64 71 aa0.94□□□□□ -2.26
HDAC9-209ENST00000425071 KRTAP6-2Q3LI66 62 aa0.9□□□□□ -2.27
HDAC9-209ENST00000425071 GPR98Q8WXG9 6306 aa0.9□□□□□ -2.27
HDAC9-209ENST00000425071 AHNAK2Q8IVF2 5795 aa0.89□□□□□ -2.27
HDAC9-209ENST00000425071 KRTAP5-10Q6L8G5 202 aa0.87□□□□□ -2.27
HDAC9-209ENST00000425071 INE1O15225 51 aa0.79□□□□□ -2.28
HDAC9-209ENST00000425071 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
HDAC9-209ENST00000425071 MUC5ACP98088 5654 aa0.78□□□□□ -2.29
HDAC9-209ENST00000425071 MUC5BQ9HC84 5762 aaPredicted RBP0.74□□□□□ -2.29
HDAC9-209ENST00000425071 AHNAKQ09666 5890 aaKnown RBP0.72□□□□□ -2.29
HDAC9-209ENST00000425071 PRM1P04553 51 aa0.61□□□□□ -2.31
HDAC9-209ENST00000425071 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
HDAC9-209ENST00000425071 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 53.2 ms