RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 KRTAP4-8A0A0G2JLE6 195 aa4.7□□□□□ -1.66
SREBF2-202ENST00000424354 KRTAP4-8Q9BYQ9 185 aa4.7□□□□□ -1.66
SREBF2-202ENST00000424354 KRTAP6-3Q3LI67 103 aa4.65□□□□□ -1.66
SREBF2-202ENST00000424354 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
SREBF2-202ENST00000424354 LCE3EQ5T5B0 92 aa4.59□□□□□ -1.68
SREBF2-202ENST00000424354 USH2AO75445 5202 aa4.57□□□□□ -1.68
SREBF2-202ENST00000424354 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
SREBF2-202ENST00000424354 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.54□□□□□ -1.68
SREBF2-202ENST00000424354 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
SREBF2-202ENST00000424354 MT1LQ93083 61 aa4.47□□□□□ -1.69
SREBF2-202ENST00000424354 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
SREBF2-202ENST00000424354 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
SREBF2-202ENST00000424354 LCE1AQ5T7P2 110 aa4.41□□□□□ -1.7
SREBF2-202ENST00000424354 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
SREBF2-202ENST00000424354 MT1EP04732 61 aa4.38□□□□□ -1.71
SREBF2-202ENST00000424354 KRTAP20-1Q3LI63 56 aa4.38□□□□□ -1.71
SREBF2-202ENST00000424354 KMT2DO14686 5537 aa4.34□□□□□ -1.71
SREBF2-202ENST00000424354 DSTQ03001 7570 aaKnown RBP4.33□□□□□ -1.72
SREBF2-202ENST00000424354 KRTAP2-3P0C7H8 128 aa4.33□□□□□ -1.72
SREBF2-202ENST00000424354 KRTAP2-4Q9BYR9 128 aa4.33□□□□□ -1.72
SREBF2-202ENST00000424354 MT4P47944 62 aa4.29□□□□□ -1.72
SREBF2-202ENST00000424354 FCGBPQ9Y6R7 5405 aaPredicted RBP4.26□□□□□ -1.73
SREBF2-202ENST00000424354 PRM1P04553 51 aa4.26□□□□□ -1.73
SREBF2-202ENST00000424354 MT1MQ8N339 61 aa4.24□□□□□ -1.73
SREBF2-202ENST00000424354 KRTAP19-7Q3SYF9 63 aa4.23□□□□□ -1.73
SREBF2-202ENST00000424354 MT3P25713 68 aa4.22□□□□□ -1.73
SREBF2-202ENST00000424354 KRTAP5-9P26371 169 aa4.2□□□□□ -1.74
SREBF2-202ENST00000424354 KRTAP4-3Q9BYR4 195 aa4.17□□□□□ -1.74
SREBF2-202ENST00000424354 KRTAP2-2Q9BYT5 123 aa4.15□□□□□ -1.74
SREBF2-202ENST00000424354 KRTAP2-1Q9BYU5 128 aa4.15□□□□□ -1.74
SREBF2-202ENST00000424354 SSPOA2VEC9 5147 aa4.13□□□□□ -1.75
SREBF2-202ENST00000424354 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
SREBF2-202ENST00000424354 MUC12Q9UKN1 5478 aa4.1□□□□□ -1.75
SREBF2-202ENST00000424354 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
SREBF2-202ENST00000424354 SYNE2Q8WXH0 6885 aaKnown RBP4.05□□□□□ -1.76
SREBF2-202ENST00000424354 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
SREBF2-202ENST00000424354 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
SREBF2-202ENST00000424354 MT1AP04731 61 aa4.01□□□□□ -1.77
SREBF2-202ENST00000424354 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
SREBF2-202ENST00000424354 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
SREBF2-202ENST00000424354 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
SREBF2-202ENST00000424354 NEBP20929 6669 aa3.91□□□□□ -1.78
SREBF2-202ENST00000424354 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
SREBF2-202ENST00000424354 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
SREBF2-202ENST00000424354 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
SREBF2-202ENST00000424354 KRTAP9-4Q9BYQ2 154 aa3.67□□□□□ -1.82
SREBF2-202ENST00000424354 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
SREBF2-202ENST00000424354 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
SREBF2-202ENST00000424354 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
SREBF2-202ENST00000424354 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
SREBF2-202ENST00000424354 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
SREBF2-202ENST00000424354 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
SREBF2-202ENST00000424354 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
SREBF2-202ENST00000424354 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
SREBF2-202ENST00000424354 KRTAP4-6Q9BYQ5 205 aa3.2□□□□□ -1.9
SREBF2-202ENST00000424354 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.92
SREBF2-202ENST00000424354 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
SREBF2-202ENST00000424354 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
SREBF2-202ENST00000424354 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
SREBF2-202ENST00000424354 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
SREBF2-202ENST00000424354 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
SREBF2-202ENST00000424354 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
SREBF2-202ENST00000424354 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
SREBF2-202ENST00000424354 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
SREBF2-202ENST00000424354 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
SREBF2-202ENST00000424354 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
SREBF2-202ENST00000424354 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
SREBF2-202ENST00000424354 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
SREBF2-202ENST00000424354 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
SREBF2-202ENST00000424354 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2.01
SREBF2-202ENST00000424354 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
SREBF2-202ENST00000424354 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
SREBF2-202ENST00000424354 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
SREBF2-202ENST00000424354 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.35□□□□□ -2.03
SREBF2-202ENST00000424354 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
SREBF2-202ENST00000424354 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
SREBF2-202ENST00000424354 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
SREBF2-202ENST00000424354 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms