RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 K7ERS5 55 aa2.82□□□□□ -1.96
LINC02539-202ENST00000419220 LCE3AQ5TA76 89 aa2.82□□□□□ -1.96
LINC02539-202ENST00000419220 SPATA8Q6RVD6 105 aa2.82□□□□□ -1.96
LINC02539-202ENST00000419220 MACF1Q9UPN3 7388 aaKnown RBP2.8□□□□□ -1.96
LINC02539-202ENST00000419220 RPS28P62857 69 aaKnown RBP2.79□□□□□ -1.96
LINC02539-202ENST00000419220 Q1T7F1 81 aa2.79□□□□□ -1.96
LINC02539-202ENST00000419220 KRTAP13-4Q3LI77 160 aa2.78□□□□□ -1.96
LINC02539-202ENST00000419220 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
LINC02539-202ENST00000419220 MT1XP80297 61 aa2.76□□□□□ -1.97
LINC02539-202ENST00000419220 MIR22HGQ0VDD5 57 aa2.76□□□□□ -1.97
LINC02539-202ENST00000419220 KRTAP12-2P59991 146 aa2.75□□□□□ -1.97
LINC02539-202ENST00000419220 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
LINC02539-202ENST00000419220 SYNE2Q8WXH0 6885 aaKnown RBP2.75□□□□□ -1.97
LINC02539-202ENST00000419220 PSPHP1O15172 72 aa2.73□□□□□ -1.97
LINC02539-202ENST00000419220 A6NED7 52 aa2.72□□□□□ -1.97
LINC02539-202ENST00000419220 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
LINC02539-202ENST00000419220 KRTAP12-1P59990 96 aa2.72□□□□□ -1.97
LINC02539-202ENST00000419220 KRTAP8-1Q8IUC2 63 aa2.7□□□□□ -1.98
LINC02539-202ENST00000419220 TNP1P09430 55 aa2.68□□□□□ -1.98
LINC02539-202ENST00000419220 SPRR2FQ96RM1 72 aa2.64□□□□□ -1.99
LINC02539-202ENST00000419220 KMT2DO14686 5537 aa2.62□□□□□ -1.99
LINC02539-202ENST00000419220 CDC42SE1Q9NRR8 79 aa2.6□□□□□ -1.99
LINC02539-202ENST00000419220 KRTAP25-1Q3LHN0 102 aa2.59□□□□□ -1.99
LINC02539-202ENST00000419220 MUC12Q9UKN1 5478 aa2.59□□□□□ -1.99
LINC02539-202ENST00000419220 SPRR2EP22531 72 aa2.57□□□□□ -2
LINC02539-202ENST00000419220 SPRR2BP35325 72 aa2.57□□□□□ -2
LINC02539-202ENST00000419220 SPRR2AP35326 72 aa2.57□□□□□ -2
LINC02539-202ENST00000419220 C10orf95Q9H7T3 257 aa2.57□□□□□ -2
LINC02539-202ENST00000419220 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
LINC02539-202ENST00000419220 MDN1Q9NU22 5596 aa2.56□□□□□ -2
LINC02539-202ENST00000419220 NEBP20929 6669 aa2.55□□□□□ -2
LINC02539-202ENST00000419220 ROMO1P60602 79 aa2.52□□□□□ -2.01
LINC02539-202ENST00000419220 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
LINC02539-202ENST00000419220 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
LINC02539-202ENST00000419220 PP632Q6XCG6 107 aa2.51□□□□□ -2.01
LINC02539-202ENST00000419220 SPRR2DP22532 72 aa2.5□□□□□ -2.01
LINC02539-202ENST00000419220 KRTAP20-1Q3LI63 56 aa2.5□□□□□ -2.01
LINC02539-202ENST00000419220 KRTAP2-3P0C7H8 128 aa2.49□□□□□ -2.01
LINC02539-202ENST00000419220 KRTAP2-4Q9BYR9 128 aa2.49□□□□□ -2.01
LINC02539-202ENST00000419220 BRK1Q8WUW1 75 aa2.48□□□□□ -2.01
LINC02539-202ENST00000419220 KRTAP19-5Q3LI72 72 aa2.47□□□□□ -2.01
LINC02539-202ENST00000419220 MT1EP04732 61 aa2.46□□□□□ -2.02
LINC02539-202ENST00000419220 MT1GP13640 62 aa2.45□□□□□ -2.02
LINC02539-202ENST00000419220 KRTAP12-3P60328 96 aa2.45□□□□□ -2.02
LINC02539-202ENST00000419220 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
LINC02539-202ENST00000419220 KRTAP19-3Q7Z4W3 81 aa2.45□□□□□ -2.02
LINC02539-202ENST00000419220 KRTAP2-1Q9BYU5 128 aa2.42□□□□□ -2.02
LINC02539-202ENST00000419220 PMAIP1Q13794 54 aa2.37□□□□□ -2.03
LINC02539-202ENST00000419220 MT1LQ93083 61 aa2.37□□□□□ -2.03
LINC02539-202ENST00000419220 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
LINC02539-202ENST00000419220 MT1MQ8N339 61 aa2.34□□□□□ -2.03
LINC02539-202ENST00000419220 DSTQ03001 7570 aaKnown RBP2.33□□□□□ -2.04
LINC02539-202ENST00000419220 PRO0628Q9UI54 55 aa2.3□□□□□ -2.04
LINC02539-202ENST00000419220 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
LINC02539-202ENST00000419220 SPRR5A0A1B0GTR4 108 aa2.26□□□□□ -2.05
LINC02539-202ENST00000419220 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
LINC02539-202ENST00000419220 KTN1-AS1Q86SY8 53 aa2.16□□□□□ -2.06
LINC02539-202ENST00000419220 MT4P47944 62 aa2.14□□□□□ -2.07
LINC02539-202ENST00000419220 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
LINC02539-202ENST00000419220 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
LINC02539-202ENST00000419220 MT1AP04731 61 aa2.05□□□□□ -2.08
LINC02539-202ENST00000419220 SYNE1Q8NF91 8797 aaKnown RBP2.04□□□□□ -2.08
LINC02539-202ENST00000419220 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
LINC02539-202ENST00000419220 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
LINC02539-202ENST00000419220 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
LINC02539-202ENST00000419220 KRTAP6-1Q3LI64 71 aa1.98□□□□□ -2.09
LINC02539-202ENST00000419220 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
LINC02539-202ENST00000419220 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
LINC02539-202ENST00000419220 KRTAP5-10Q6L8G5 202 aa1.88□□□□□ -2.11
LINC02539-202ENST00000419220 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
LINC02539-202ENST00000419220 MUC5ACP98088 5654 aa1.63□□□□□ -2.15
LINC02539-202ENST00000419220 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.15
LINC02539-202ENST00000419220 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
LINC02539-202ENST00000419220 INE1O15225 51 aa1.42□□□□□ -2.18
LINC02539-202ENST00000419220 PRM1P04553 51 aa1.25□□□□□ -2.21
LINC02539-202ENST00000419220 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
LINC02539-202ENST00000419220 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
LINC02539-202ENST00000419220 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 49.6 ms