RNA–Protein interactions for RNA: ENST00000418909.6

SHROOM2-202, Transcript of shroom family member 2, humanhuman

TSL 1 (best) BASIC

Gene SHROOM2, Length 4,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-202ENST00000418909 MT1EP04732 61 aa3.83□□□□□ -1.8
SHROOM2-202ENST00000418909 MT3P25713 68 aa3.81□□□□□ -1.8
SHROOM2-202ENST00000418909 MT1LQ93083 61 aa3.8□□□□□ -1.8
SHROOM2-202ENST00000418909 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
SHROOM2-202ENST00000418909 KRTAP9-7A8MTY7 169 aa3.76□□□□□ -1.81
SHROOM2-202ENST00000418909 LCE3BQ5TA77 95 aa3.75□□□□□ -1.81
SHROOM2-202ENST00000418909 MUC2Q02817 5179 aa3.71□□□□□ -1.82
SHROOM2-202ENST00000418909 MT1MQ8N339 61 aa3.7□□□□□ -1.82
SHROOM2-202ENST00000418909 KRTAP6-3Q3LI67 103 aa3.69□□□□□ -1.82
SHROOM2-202ENST00000418909 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.66□□□□□ -1.82
SHROOM2-202ENST00000418909 KRTAP4-7Q9BYR0 210 aa3.63□□□□□ -1.83
SHROOM2-202ENST00000418909 KRTAP20-1Q3LI63 56 aa3.62□□□□□ -1.83
SHROOM2-202ENST00000418909 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
SHROOM2-202ENST00000418909 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
SHROOM2-202ENST00000418909 MT4P47944 62 aa3.59□□□□□ -1.84
SHROOM2-202ENST00000418909 SYNE2Q8WXH0 6885 aaKnown RBP3.56□□□□□ -1.84
SHROOM2-202ENST00000418909 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
SHROOM2-202ENST00000418909 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
SHROOM2-202ENST00000418909 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
SHROOM2-202ENST00000418909 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
SHROOM2-202ENST00000418909 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
SHROOM2-202ENST00000418909 LCE5AQ5TCM9 118 aa3.43□□□□□ -1.86
SHROOM2-202ENST00000418909 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
SHROOM2-202ENST00000418909 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
SHROOM2-202ENST00000418909 LOC100996750A0A140TA64 210 aa3.41□□□□□ -1.86
SHROOM2-202ENST00000418909 MT1AP04731 61 aa3.41□□□□□ -1.86
SHROOM2-202ENST00000418909 USH2AO75445 5202 aa3.41□□□□□ -1.86
SHROOM2-202ENST00000418909 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
SHROOM2-202ENST00000418909 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
SHROOM2-202ENST00000418909 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
SHROOM2-202ENST00000418909 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
SHROOM2-202ENST00000418909 LCE1DQ5T752 114 aa3.26□□□□□ -1.89
SHROOM2-202ENST00000418909 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
SHROOM2-202ENST00000418909 KMT2DO14686 5537 aa3.24□□□□□ -1.89
SHROOM2-202ENST00000418909 KRTAP5-9P26371 169 aa3.23□□□□□ -1.89
SHROOM2-202ENST00000418909 FCGBPQ9Y6R7 5405 aaPredicted RBP3.23□□□□□ -1.89
SHROOM2-202ENST00000418909 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
SHROOM2-202ENST00000418909 KRTAP4-9Q9BYQ8 210 aa3.22□□□□□ -1.89
SHROOM2-202ENST00000418909 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
SHROOM2-202ENST00000418909 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
SHROOM2-202ENST00000418909 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
SHROOM2-202ENST00000418909 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
SHROOM2-202ENST00000418909 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
SHROOM2-202ENST00000418909 NEBP20929 6669 aa3.12□□□□□ -1.91
SHROOM2-202ENST00000418909 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
SHROOM2-202ENST00000418909 PRM1P04553 51 aa3.1□□□□□ -1.91
SHROOM2-202ENST00000418909 MDN1Q9NU22 5596 aa3.03□□□□□ -1.92
SHROOM2-202ENST00000418909 MUC12Q9UKN1 5478 aa2.97□□□□□ -1.93
SHROOM2-202ENST00000418909 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
SHROOM2-202ENST00000418909 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.96
SHROOM2-202ENST00000418909 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
SHROOM2-202ENST00000418909 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
SHROOM2-202ENST00000418909 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
SHROOM2-202ENST00000418909 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
SHROOM2-202ENST00000418909 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
SHROOM2-202ENST00000418909 KRTAP4-11Q9BYQ6 195 aa2.59□□□□□ -1.99
SHROOM2-202ENST00000418909 KRTAP5-5Q701N2 237 aaPredicted RBP2.55□□□□□ -2
SHROOM2-202ENST00000418909 KRTAP5-3Q6L8H2 238 aa2.49□□□□□ -2.01
SHROOM2-202ENST00000418909 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.02
SHROOM2-202ENST00000418909 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
SHROOM2-202ENST00000418909 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.04
SHROOM2-202ENST00000418909 KRTAP4-12Q9BQ66 201 aa2.32□□□□□ -2.04
SHROOM2-202ENST00000418909 KRTAP4-2Q9BYR5 136 aa2.32□□□□□ -2.04
SHROOM2-202ENST00000418909 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
SHROOM2-202ENST00000418909 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
SHROOM2-202ENST00000418909 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
SHROOM2-202ENST00000418909 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
SHROOM2-202ENST00000418909 KRTAP5-10Q6L8G5 202 aa1.94□□□□□ -2.1
SHROOM2-202ENST00000418909 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
SHROOM2-202ENST00000418909 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
SHROOM2-202ENST00000418909 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.1
SHROOM2-202ENST00000418909 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.11
SHROOM2-202ENST00000418909 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
SHROOM2-202ENST00000418909 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
SHROOM2-202ENST00000418909 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
SHROOM2-202ENST00000418909 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
SHROOM2-202ENST00000418909 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 40.7 ms