RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 FAT3Q8TDW7 4589 aa1.37□□□□□ -2.19
HMGB3P23-201ENST00000414981 DYNC1H1Q14204 4646 aaKnown RBP1.36□□□□□ -2.19
HMGB3P23-201ENST00000414981 DNHD1Q96M86 4753 aa1.36□□□□□ -2.19
HMGB3P23-201ENST00000414981 KRTAP8-1Q8IUC2 63 aa1.36□□□□□ -2.19
HMGB3P23-201ENST00000414981 MYCBP2O75592 4640 aa1.33□□□□□ -2.2
HMGB3P23-201ENST00000414981 KRTAP4-1Q9BYQ7 146 aa1.33□□□□□ -2.2
HMGB3P23-201ENST00000414981 RYR2Q92736 4967 aa1.29□□□□□ -2.2
HMGB3P23-201ENST00000414981 RYR1P21817 5038 aa1.29□□□□□ -2.2
HMGB3P23-201ENST00000414981 KRTAP19-8Q3LI54 63 aa1.29□□□□□ -2.2
HMGB3P23-201ENST00000414981 FLGP20930 4061 aaPredicted RBP1.26□□□□□ -2.21
HMGB3P23-201ENST00000414981 LRP2P98164 4655 aa1.26□□□□□ -2.21
HMGB3P23-201ENST00000414981 FCGBPQ9Y6R7 5405 aaPredicted RBP1.26□□□□□ -2.21
HMGB3P23-201ENST00000414981 KMT2CQ8NEZ4 4911 aaKnown RBP1.25□□□□□ -2.21
HMGB3P23-201ENST00000414981 MUC17Q685J3 4493 aa1.24□□□□□ -2.21
HMGB3P23-201ENST00000414981 LPAP08519 4548 aa1.23□□□□□ -2.21
HMGB3P23-201ENST00000414981 MT1XP80297 61 aa1.22□□□□□ -2.21
HMGB3P23-201ENST00000414981 MT2AP02795 61 aa1.21□□□□□ -2.22
HMGB3P23-201ENST00000414981 HERC1Q15751 4861 aa1.21□□□□□ -2.22
HMGB3P23-201ENST00000414981 RYR3Q15413 4870 aa1.2□□□□□ -2.22
HMGB3P23-201ENST00000414981 M0R2T5 61 aa1.2□□□□□ -2.22
HMGB3P23-201ENST00000414981 MT1BP07438 61 aa1.2□□□□□ -2.22
HMGB3P23-201ENST00000414981 KRTAP2-3P0C7H8 128 aa1.2□□□□□ -2.22
HMGB3P23-201ENST00000414981 MT1HP80294 61 aa1.2□□□□□ -2.22
HMGB3P23-201ENST00000414981 KRTAP2-4Q9BYR9 128 aa1.2□□□□□ -2.22
HMGB3P23-201ENST00000414981 KRTAP2-1Q9BYU5 128 aa1.2□□□□□ -2.22
HMGB3P23-201ENST00000414981 KIAA1109Q2LD37 5005 aa1.2□□□□□ -2.22
HMGB3P23-201ENST00000414981 ABCA13Q86UQ4 5058 aa1.2□□□□□ -2.22
HMGB3P23-201ENST00000414981 MT1FP04733 61 aa1.19□□□□□ -2.22
HMGB3P23-201ENST00000414981 KRTAP19-5Q3LI72 72 aa1.14□□□□□ -2.23
HMGB3P23-201ENST00000414981 BIRC6Q9NR09 4857 aa1.12□□□□□ -2.23
HMGB3P23-201ENST00000414981 HMCN2Q8NDA2 5059 aa1.12□□□□□ -2.23
HMGB3P23-201ENST00000414981 MT1EP04732 61 aa1.11□□□□□ -2.23
HMGB3P23-201ENST00000414981 PCLOQ9Y6V0 5065 aa1.09□□□□□ -2.23
HMGB3P23-201ENST00000414981 KRTAP19-7Q3SYF9 63 aa1.09□□□□□ -2.23
HMGB3P23-201ENST00000414981 MT1LQ93083 61 aa1.09□□□□□ -2.23
HMGB3P23-201ENST00000414981 MUC2Q02817 5179 aa1.07□□□□□ -2.24
HMGB3P23-201ENST00000414981 HERC2O95714 4834 aa1.07□□□□□ -2.24
HMGB3P23-201ENST00000414981 EPPK1P58107 5090 aaKnown RBP1.06□□□□□ -2.24
HMGB3P23-201ENST00000414981 MT1AP04731 61 aa1.05□□□□□ -2.24
HMGB3P23-201ENST00000414981 UBR4Q5T4S7 5183 aa1.04□□□□□ -2.24
HMGB3P23-201ENST00000414981 RNF213Q63HN8 5207 aa1.02□□□□□ -2.25
HMGB3P23-201ENST00000414981 MT1GP13640 62 aa1.02□□□□□ -2.25
HMGB3P23-201ENST00000414981 KRTAP19-6Q3LI70 58 aa0.99□□□□□ -2.25
HMGB3P23-201ENST00000414981 KRTAP19-3Q7Z4W3 81 aa0.99□□□□□ -2.25
HMGB3P23-201ENST00000414981 FAT4Q6V0I7 4981 aa0.98□□□□□ -2.25
HMGB3P23-201ENST00000414981 MT1MQ8N339 61 aa0.98□□□□□ -2.25
HMGB3P23-201ENST00000414981 SPRR2FQ96RM1 72 aa0.92□□□□□ -2.26
HMGB3P23-201ENST00000414981 USH2AO75445 5202 aa0.92□□□□□ -2.26
HMGB3P23-201ENST00000414981 PRM1P04553 51 aa0.9□□□□□ -2.27
HMGB3P23-201ENST00000414981 KMT2DO14686 5537 aa0.89□□□□□ -2.27
HMGB3P23-201ENST00000414981 SPRR2AP35326 72 aa0.89□□□□□ -2.27
HMGB3P23-201ENST00000414981 KRTAP6-1Q3LI64 71 aa0.88□□□□□ -2.27
HMGB3P23-201ENST00000414981 SSPOA2VEC9 5147 aa0.87□□□□□ -2.27
HMGB3P23-201ENST00000414981 SPRR2EP22531 72 aa0.85□□□□□ -2.27
HMGB3P23-201ENST00000414981 SPRR2BP35325 72 aa0.85□□□□□ -2.27
HMGB3P23-201ENST00000414981 KRTAP6-2Q3LI66 62 aa0.85□□□□□ -2.27
HMGB3P23-201ENST00000414981 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
HMGB3P23-201ENST00000414981 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
HMGB3P23-201ENST00000414981 SPRR2DP22532 72 aa0.8□□□□□ -2.28
HMGB3P23-201ENST00000414981 SYNE1Q8NF91 8797 aaKnown RBP0.78□□□□□ -2.28
HMGB3P23-201ENST00000414981 MUC12Q9UKN1 5478 aa0.77□□□□□ -2.29
HMGB3P23-201ENST00000414981 MDN1Q9NU22 5596 aa0.68□□□□□ -2.3
HMGB3P23-201ENST00000414981 DSTQ03001 7570 aaKnown RBP0.67□□□□□ -2.3
HMGB3P23-201ENST00000414981 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
HMGB3P23-201ENST00000414981 KRTAP20-2Q3LI61 65 aa0.66□□□□□ -2.3
HMGB3P23-201ENST00000414981 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.31
HMGB3P23-201ENST00000414981 AHNAK2Q8IVF2 5795 aa0.64□□□□□ -2.31
HMGB3P23-201ENST00000414981 KRTAP20-1Q3LI63 56 aa0.63□□□□□ -2.31
HMGB3P23-201ENST00000414981 MUC5ACP98088 5654 aa0.62□□□□□ -2.31
HMGB3P23-201ENST00000414981 FSIP2Q5CZC0 6907 aa0.61□□□□□ -2.31
HMGB3P23-201ENST00000414981 MUC5BQ9HC84 5762 aaPredicted RBP0.61□□□□□ -2.31
HMGB3P23-201ENST00000414981 MACF1Q9UPN3 7388 aaKnown RBP0.61□□□□□ -2.31
HMGB3P23-201ENST00000414981 SYNE2Q8WXH0 6885 aaKnown RBP0.58□□□□□ -2.32
HMGB3P23-201ENST00000414981 MT4P47944 62 aa0.57□□□□□ -2.32
HMGB3P23-201ENST00000414981 NEBP20929 6669 aa0.49□□□□□ -2.33
HMGB3P23-201ENST00000414981 GPR98Q8WXG9 6306 aa0.49□□□□□ -2.33
HMGB3P23-201ENST00000414981 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 98.1 ms