RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 H1FX-AS1Q4G0G2 97 aa1.04□□□□□ -2.24
HMGB1P11-201ENST00000413899 FCGBPQ9Y6R7 5405 aaPredicted RBP1.03□□□□□ -2.24
HMGB1P11-201ENST00000413899 MIR22HGQ0VDD5 57 aa1.03□□□□□ -2.24
HMGB1P11-201ENST00000413899 FLGP20930 4061 aaPredicted RBP1.03□□□□□ -2.25
HMGB1P11-201ENST00000413899 UQCR11O14957 56 aa1.02□□□□□ -2.25
HMGB1P11-201ENST00000413899 PCLOQ9Y6V0 5065 aa1.02□□□□□ -2.25
HMGB1P11-201ENST00000413899 HERC1Q15751 4861 aa1.01□□□□□ -2.25
HMGB1P11-201ENST00000413899 MT1HP80294 61 aa1.01□□□□□ -2.25
HMGB1P11-201ENST00000413899 KTN1-AS1Q86SY8 53 aa1.01□□□□□ -2.25
HMGB1P11-201ENST00000413899 SPTSSBQ8NFR3 76 aa1.01□□□□□ -2.25
HMGB1P11-201ENST00000413899 HMCN2Q8NDA2 5059 aa1□□□□□ -2.25
HMGB1P11-201ENST00000413899 MT2AP02795 61 aa0.99□□□□□ -2.25
HMGB1P11-201ENST00000413899 MT1FP04733 61 aa0.99□□□□□ -2.25
HMGB1P11-201ENST00000413899 PMAIP1Q13794 54 aa0.99□□□□□ -2.25
HMGB1P11-201ENST00000413899 CSAG1Q6PB30 78 aa0.98□□□□□ -2.25
HMGB1P11-201ENST00000413899 A0A0D9SG42 100 aa0.97□□□□□ -2.25
HMGB1P11-201ENST00000413899 SPRR2GQ9BYE4 73 aa0.97□□□□□ -2.25
HMGB1P11-201ENST00000413899 M0QZ58 72 aa0.96□□□□□ -2.26
HMGB1P11-201ENST00000413899 MT1BP07438 61 aa0.96□□□□□ -2.26
HMGB1P11-201ENST00000413899 KRTAP19-8Q3LI54 63 aa0.96□□□□□ -2.26
HMGB1P11-201ENST00000413899 C10orf95Q9H7T3 257 aa0.95□□□□□ -2.26
HMGB1P11-201ENST00000413899 ROMO1P60602 79 aa0.94□□□□□ -2.26
HMGB1P11-201ENST00000413899 MT1XP80297 61 aa0.93□□□□□ -2.26
HMGB1P11-201ENST00000413899 CRIPTQ9P021 101 aa0.93□□□□□ -2.26
HMGB1P11-201ENST00000413899 LINC01554Q52M75 96 aa0.92□□□□□ -2.26
HMGB1P11-201ENST00000413899 UBR4Q5T4S7 5183 aa0.92□□□□□ -2.26
HMGB1P11-201ENST00000413899 FAT4Q6V0I7 4981 aa0.91□□□□□ -2.26
HMGB1P11-201ENST00000413899 RNF213Q63HN8 5207 aa0.91□□□□□ -2.26
HMGB1P11-201ENST00000413899 MUC2Q02817 5179 aa0.9□□□□□ -2.27
HMGB1P11-201ENST00000413899 M0R2T5 61 aa0.88□□□□□ -2.27
HMGB1P11-201ENST00000413899 KRTAP8-1Q8IUC2 63 aa0.86□□□□□ -2.27
HMGB1P11-201ENST00000413899 TNP1P09430 55 aa0.84□□□□□ -2.27
HMGB1P11-201ENST00000413899 KRTAP19-6Q3LI70 58 aa0.84□□□□□ -2.27
HMGB1P11-201ENST00000413899 KRTAP19-7Q3SYF9 63 aa0.83□□□□□ -2.28
HMGB1P11-201ENST00000413899 PLAC4Q8WY50 150 aa0.83□□□□□ -2.28
HMGB1P11-201ENST00000413899 SSPOA2VEC9 5147 aa0.82□□□□□ -2.28
HMGB1P11-201ENST00000413899 KRTAP19-5Q3LI72 72 aa0.82□□□□□ -2.28
HMGB1P11-201ENST00000413899 MT1EP04732 61 aa0.8□□□□□ -2.28
HMGB1P11-201ENST00000413899 KRTAP5-10Q6L8G5 202 aa0.8□□□□□ -2.28
HMGB1P11-201ENST00000413899 MT1LQ93083 61 aa0.79□□□□□ -2.28
HMGB1P11-201ENST00000413899 USH2AO75445 5202 aa0.78□□□□□ -2.28
HMGB1P11-201ENST00000413899 MT1MQ8N339 61 aa0.75□□□□□ -2.29
HMGB1P11-201ENST00000413899 KRTAP19-3Q7Z4W3 81 aa0.74□□□□□ -2.29
HMGB1P11-201ENST00000413899 AHNAKQ09666 5890 aaKnown RBP0.73□□□□□ -2.29
HMGB1P11-201ENST00000413899 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
HMGB1P11-201ENST00000413899 KRTAP2-3P0C7H8 128 aa0.72□□□□□ -2.29
HMGB1P11-201ENST00000413899 KRTAP2-4Q9BYR9 128 aa0.72□□□□□ -2.29
HMGB1P11-201ENST00000413899 KRTAP2-1Q9BYU5 128 aa0.72□□□□□ -2.29
HMGB1P11-201ENST00000413899 MT1GP13640 62 aa0.71□□□□□ -2.3
HMGB1P11-201ENST00000413899 SPRR2FQ96RM1 72 aa0.71□□□□□ -2.3
HMGB1P11-201ENST00000413899 KMT2DO14686 5537 aa0.71□□□□□ -2.3
HMGB1P11-201ENST00000413899 AHNAK2Q8IVF2 5795 aa0.7□□□□□ -2.3
HMGB1P11-201ENST00000413899 MUC5BQ9HC84 5762 aaPredicted RBP0.69□□□□□ -2.3
HMGB1P11-201ENST00000413899 FSIP2Q5CZC0 6907 aa0.69□□□□□ -2.3
HMGB1P11-201ENST00000413899 SPRR2EP22531 72 aa0.67□□□□□ -2.3
HMGB1P11-201ENST00000413899 SPRR2BP35325 72 aa0.67□□□□□ -2.3
HMGB1P11-201ENST00000413899 SPRR2AP35326 72 aa0.67□□□□□ -2.3
HMGB1P11-201ENST00000413899 KRTAP6-1Q3LI64 71 aa0.67□□□□□ -2.3
HMGB1P11-201ENST00000413899 MT1AP04731 61 aa0.66□□□□□ -2.3
HMGB1P11-201ENST00000413899 MACF1Q9UPN3 7388 aaKnown RBP0.66□□□□□ -2.3
HMGB1P11-201ENST00000413899 MUC12Q9UKN1 5478 aa0.64□□□□□ -2.31
HMGB1P11-201ENST00000413899 SPRR2DP22532 72 aa0.64□□□□□ -2.31
HMGB1P11-201ENST00000413899 SYNE2Q8WXH0 6885 aaKnown RBP0.64□□□□□ -2.31
HMGB1P11-201ENST00000413899 INE1O15225 51 aa0.61□□□□□ -2.31
HMGB1P11-201ENST00000413899 NEBP20929 6669 aa0.61□□□□□ -2.31
HMGB1P11-201ENST00000413899 KRTAP6-2Q3LI66 62 aa0.59□□□□□ -2.31
HMGB1P11-201ENST00000413899 KRTAP20-2Q3LI61 65 aa0.58□□□□□ -2.32
HMGB1P11-201ENST00000413899 SYNE1Q8NF91 8797 aaKnown RBP0.56□□□□□ -2.32
HMGB1P11-201ENST00000413899 MT4P47944 62 aa0.55□□□□□ -2.32
HMGB1P11-201ENST00000413899 KRTAP20-1Q3LI63 56 aa0.55□□□□□ -2.32
HMGB1P11-201ENST00000413899 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
HMGB1P11-201ENST00000413899 DSTQ03001 7570 aaKnown RBP0.52□□□□□ -2.33
HMGB1P11-201ENST00000413899 PRM1P04553 51 aa0.51□□□□□ -2.33
HMGB1P11-201ENST00000413899 MUC5ACP98088 5654 aa0.5□□□□□ -2.33
HMGB1P11-201ENST00000413899 GPR98Q8WXG9 6306 aa0.47□□□□□ -2.33
HMGB1P11-201ENST00000413899 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
HMGB1P11-201ENST00000413899 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 65.7 ms