RNA–Protein interactions for RNA: ENST00000411975.5

ABCA13-201, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-201ENST00000411975 LCE3BQ5TA77 95 aa3.98□□□□□ -1.77
ABCA13-201ENST00000411975 KRTAP19-6Q3LI70 58 aa3.96□□□□□ -1.77
ABCA13-201ENST00000411975 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
ABCA13-201ENST00000411975 SPRR2DP22532 72 aa3.89□□□□□ -1.79
ABCA13-201ENST00000411975 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
ABCA13-201ENST00000411975 KRTAP19-7Q3SYF9 63 aa3.87□□□□□ -1.79
ABCA13-201ENST00000411975 MT1MQ8N339 61 aa3.85□□□□□ -1.79
ABCA13-201ENST00000411975 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
ABCA13-201ENST00000411975 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
ABCA13-201ENST00000411975 KRTAP9-2Q9BYQ4 174 aa3.75□□□□□ -1.81
ABCA13-201ENST00000411975 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
ABCA13-201ENST00000411975 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
ABCA13-201ENST00000411975 USH2AO75445 5202 aa3.62□□□□□ -1.83
ABCA13-201ENST00000411975 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
ABCA13-201ENST00000411975 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
ABCA13-201ENST00000411975 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
ABCA13-201ENST00000411975 KRTAP2-1Q9BYU5 128 aa3.6□□□□□ -1.83
ABCA13-201ENST00000411975 MT3P25713 68 aa3.54□□□□□ -1.84
ABCA13-201ENST00000411975 MT1AP04731 61 aa3.54□□□□□ -1.84
ABCA13-201ENST00000411975 FCGBPQ9Y6R7 5405 aaPredicted RBP3.51□□□□□ -1.85
ABCA13-201ENST00000411975 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
ABCA13-201ENST00000411975 LCE5AQ5TCM9 118 aa3.49□□□□□ -1.85
ABCA13-201ENST00000411975 SYNE2Q8WXH0 6885 aaKnown RBP3.47□□□□□ -1.85
ABCA13-201ENST00000411975 KMT2DO14686 5537 aa3.47□□□□□ -1.85
ABCA13-201ENST00000411975 DSTQ03001 7570 aaKnown RBP3.47□□□□□ -1.85
ABCA13-201ENST00000411975 MT4P47944 62 aa3.44□□□□□ -1.86
ABCA13-201ENST00000411975 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
ABCA13-201ENST00000411975 KRTAP9-6A0A140TA67 174 aa3.44□□□□□ -1.86
ABCA13-201ENST00000411975 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
ABCA13-201ENST00000411975 PRM1P04553 51 aa3.38□□□□□ -1.87
ABCA13-201ENST00000411975 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
ABCA13-201ENST00000411975 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
ABCA13-201ENST00000411975 SSPOA2VEC9 5147 aa3.33□□□□□ -1.88
ABCA13-201ENST00000411975 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.3□□□□□ -1.88
ABCA13-201ENST00000411975 MUC12Q9UKN1 5478 aa3.29□□□□□ -1.88
ABCA13-201ENST00000411975 KRTAP9-7A8MTY7 169 aa3.27□□□□□ -1.89
ABCA13-201ENST00000411975 MACF1Q9UPN3 7388 aaKnown RBP3.26□□□□□ -1.89
ABCA13-201ENST00000411975 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
ABCA13-201ENST00000411975 LCE1DQ5T752 114 aa3.25□□□□□ -1.89
ABCA13-201ENST00000411975 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
ABCA13-201ENST00000411975 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
ABCA13-201ENST00000411975 KRTAP4-6Q9BYQ5 205 aa3.21□□□□□ -1.9
ABCA13-201ENST00000411975 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
ABCA13-201ENST00000411975 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
ABCA13-201ENST00000411975 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
ABCA13-201ENST00000411975 KRTAP2-2Q9BYT5 123 aa3.07□□□□□ -1.92
ABCA13-201ENST00000411975 MDN1Q9NU22 5596 aa2.99□□□□□ -1.93
ABCA13-201ENST00000411975 NEBP20929 6669 aa2.91□□□□□ -1.94
ABCA13-201ENST00000411975 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
ABCA13-201ENST00000411975 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
ABCA13-201ENST00000411975 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
ABCA13-201ENST00000411975 KRTAP5-4Q6L8H1 288 aa2.6□□□□□ -1.99
ABCA13-201ENST00000411975 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
ABCA13-201ENST00000411975 LCE1CQ5T751 118 aa2.57□□□□□ -2
ABCA13-201ENST00000411975 LCE1EQ5T753 118 aa2.57□□□□□ -2
ABCA13-201ENST00000411975 LCE1FQ5T754 118 aa2.57□□□□□ -2
ABCA13-201ENST00000411975 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2
ABCA13-201ENST00000411975 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
ABCA13-201ENST00000411975 KRTAP4-11Q9BYQ6 195 aa2.52□□□□□ -2.01
ABCA13-201ENST00000411975 KRTAP4-2Q9BYR5 136 aa2.51□□□□□ -2.01
ABCA13-201ENST00000411975 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
ABCA13-201ENST00000411975 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
ABCA13-201ENST00000411975 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
ABCA13-201ENST00000411975 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
ABCA13-201ENST00000411975 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
ABCA13-201ENST00000411975 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
ABCA13-201ENST00000411975 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
ABCA13-201ENST00000411975 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
ABCA13-201ENST00000411975 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
ABCA13-201ENST00000411975 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
ABCA13-201ENST00000411975 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
ABCA13-201ENST00000411975 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
ABCA13-201ENST00000411975 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
ABCA13-201ENST00000411975 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
ABCA13-201ENST00000411975 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
ABCA13-201ENST00000411975 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
ABCA13-201ENST00000411975 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
ABCA13-201ENST00000411975 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 6.7 ms