RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
CLINT1-201ENST00000411809 MT1LQ93083 61 aa4.53□□□□□ -1.68
CLINT1-201ENST00000411809 LCE2DQ5TA82 110 aaPredicted RBP4.47□□□□□ -1.69
CLINT1-201ENST00000411809 MUC12Q9UKN1 5478 aa4.46□□□□□ -1.7
CLINT1-201ENST00000411809 KRTAP2-3P0C7H8 128 aa4.42□□□□□ -1.7
CLINT1-201ENST00000411809 KRTAP2-4Q9BYR9 128 aa4.42□□□□□ -1.7
CLINT1-201ENST00000411809 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
CLINT1-201ENST00000411809 LOC100996750A0A140TA64 210 aa4.36□□□□□ -1.71
CLINT1-201ENST00000411809 KRTAP4-3Q9BYR4 195 aa4.36□□□□□ -1.71
CLINT1-201ENST00000411809 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
CLINT1-201ENST00000411809 MT1GP13640 62 aa4.3□□□□□ -1.72
CLINT1-201ENST00000411809 KRTAP19-3Q7Z4W3 81 aa4.25□□□□□ -1.73
CLINT1-201ENST00000411809 MT1MQ8N339 61 aa4.24□□□□□ -1.73
CLINT1-201ENST00000411809 LCE5AQ5TCM9 118 aa4.19□□□□□ -1.74
CLINT1-201ENST00000411809 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
CLINT1-201ENST00000411809 LCE3BQ5TA77 95 aa4.16□□□□□ -1.74
CLINT1-201ENST00000411809 KRTAP4-9Q9BYQ8 210 aa4.12□□□□□ -1.75
CLINT1-201ENST00000411809 MACF1Q9UPN3 7388 aaKnown RBP4.09□□□□□ -1.75
CLINT1-201ENST00000411809 SPRR2FQ96RM1 72 aa4.07□□□□□ -1.76
CLINT1-201ENST00000411809 KRTAP5-9P26371 169 aa4.03□□□□□ -1.76
CLINT1-201ENST00000411809 KRTAP9-2Q9BYQ4 174 aa3.99□□□□□ -1.77
CLINT1-201ENST00000411809 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
CLINT1-201ENST00000411809 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
CLINT1-201ENST00000411809 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
CLINT1-201ENST00000411809 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
CLINT1-201ENST00000411809 MT1AP04731 61 aa3.8□□□□□ -1.8
CLINT1-201ENST00000411809 KRTAP9-6A0A140TA67 174 aa3.8□□□□□ -1.8
CLINT1-201ENST00000411809 KRTAP9-7A8MTY7 169 aa3.76□□□□□ -1.81
CLINT1-201ENST00000411809 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
CLINT1-201ENST00000411809 PRM1P04553 51 aa3.72□□□□□ -1.81
CLINT1-201ENST00000411809 SPRR2EP22531 72 aa3.72□□□□□ -1.81
CLINT1-201ENST00000411809 SPRR2BP35325 72 aa3.72□□□□□ -1.81
CLINT1-201ENST00000411809 SPRR2AP35326 72 aa3.72□□□□□ -1.81
CLINT1-201ENST00000411809 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
CLINT1-201ENST00000411809 KRTAP6-3Q3LI67 103 aa3.67□□□□□ -1.82
CLINT1-201ENST00000411809 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.63□□□□□ -1.83
CLINT1-201ENST00000411809 KRTAP9-4Q9BYQ2 154 aa3.6□□□□□ -1.83
CLINT1-201ENST00000411809 SPRR2DP22532 72 aa3.56□□□□□ -1.84
CLINT1-201ENST00000411809 KRTAP5-4Q6L8H1 288 aa3.5□□□□□ -1.85
CLINT1-201ENST00000411809 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
CLINT1-201ENST00000411809 NEBP20929 6669 aa3.4□□□□□ -1.87
CLINT1-201ENST00000411809 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
CLINT1-201ENST00000411809 MT3P25713 68 aa3.35□□□□□ -1.87
CLINT1-201ENST00000411809 KRTAP4-6Q9BYQ5 205 aa3.32□□□□□ -1.88
CLINT1-201ENST00000411809 MT4P47944 62 aa3.27□□□□□ -1.89
CLINT1-201ENST00000411809 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
CLINT1-201ENST00000411809 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
CLINT1-201ENST00000411809 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
CLINT1-201ENST00000411809 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
CLINT1-201ENST00000411809 KRTAP5-3Q6L8H2 238 aa3.13□□□□□ -1.91
CLINT1-201ENST00000411809 LCE1DQ5T752 114 aa3.11□□□□□ -1.91
CLINT1-201ENST00000411809 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
CLINT1-201ENST00000411809 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
CLINT1-201ENST00000411809 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
CLINT1-201ENST00000411809 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
CLINT1-201ENST00000411809 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
CLINT1-201ENST00000411809 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
CLINT1-201ENST00000411809 KRTAP5-10Q6L8G5 202 aa2.81□□□□□ -1.96
CLINT1-201ENST00000411809 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
CLINT1-201ENST00000411809 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
CLINT1-201ENST00000411809 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
CLINT1-201ENST00000411809 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.98
CLINT1-201ENST00000411809 KRTAP5-7Q6L8G8 165 aa2.65□□□□□ -1.99
CLINT1-201ENST00000411809 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
CLINT1-201ENST00000411809 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
CLINT1-201ENST00000411809 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
CLINT1-201ENST00000411809 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
CLINT1-201ENST00000411809 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
CLINT1-201ENST00000411809 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
CLINT1-201ENST00000411809 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
CLINT1-201ENST00000411809 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
CLINT1-201ENST00000411809 KRTAP9-9Q9BYP9 154 aa2.3□□□□□ -2.04
CLINT1-201ENST00000411809 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
CLINT1-201ENST00000411809 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
CLINT1-201ENST00000411809 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
CLINT1-201ENST00000411809 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
CLINT1-201ENST00000411809 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 57.1 ms